Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NPAS3

Gene Name Gene ID Reads Annotation
NPAS3 ENSGALG00000029022 1950 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]











Genes with expression patterns similar to NPAS3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NPAS3 ENSGALG00000029022 1950 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
2. LASP-2 LASP-2 4415 2.359 - - 0.827 - - 0.825 - - - 0.707
3. ENSGALG00000022967 ENSGALG00000022967 240 2.32 - - 0.756 - - 0.854 - - - 0.710
4. HES5 ENSGALG00000001141 6514 2.312 - - 0.831 - - 0.760 - - - 0.721 hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
5. TUBB2B ENSGALG00000012821 41535 2.228 - - 0.758 - - 0.736 - - - 0.734 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
6. ZIC1 ENSGALG00000040532 6543 1.81 - - 0.858 - - 0.952 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
7. DENND5B 4077 1.718 - - 0.798 - - 0.920 - - - - DENN domain containing 5B, transcript variant X1
8. WNT4 ENSGALG00000041708 1277 1.71 - - 0.772 - - 0.938 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
9. LFNG ENSGALG00000038515 5178 1.676 - - 0.823 - - 0.853 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
10. DRAXIN ENSGALG00000004631 3122 1.675 - - 0.816 - - 0.859 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
11. LIPG ENSGALG00000043734 2490 1.661 - - 0.750 - - 0.911 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
12. OPTC ENSGALG00000003554 3698 1.655 - - 0.834 - - 0.821 - - - - opticin [Source:NCBI gene;Acc:395130]
13. CRABP-I ENSGALG00000003193 67258 1.634 - - 0.780 - - 0.854 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
14. CHL1 ENSGALG00000037856 1565 1.633 - - - - - 0.882 - - - 0.751 cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
15. GNG10 ENSGALG00000015683 6905 1.632 - - 0.761 - - 0.871 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
16. ASTN1 ENSGALG00000004472 855 1.625 - - - - - 0.850 - - - 0.775 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
17. PTPRZ1 ENSGALG00000040114 3410 1.613 - - 0.773 - - 0.840 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
18. PAX3 ENSGALG00000030944 2987 1.611 - - 0.724 - - 0.887 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
19. FZD3 ENSGALG00000042308 3356 1.607 - - 0.720 - - 0.887 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
20. SRGAP3 ENSGALG00000008378 4331 1.601 - - 0.754 - - 0.847 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
21. ENSGALG00000013357 ENSGALG00000013357 2282 1.593 - - - - - 0.717 0.876 - - -
22. CERCAM ENSGALG00000004986 5158 1.585 - - 0.711 - - 0.874 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
23. MOXD1 ENSGALG00000002911 8523 1.584 - - - - - 0.851 0.733 - - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
24. TAGLN3 ENSGALG00000015379 7865 1.519 - - 0.726 - - - - - - 0.793 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
25. SCG3 ENSGALG00000043583 1247 1.503 - - - - - 0.730 0.773 - - - secretogranin III [Source:NCBI gene;Acc:415424]
26. PROCA1 668 1.497 - - 0.739 - - 0.758 - - - - protein interacting with cyclin A1
27. CKB ENSGALG00000011511 2100 1.492 - - - - - 0.775 - - - 0.717 creatine kinase B [Source:NCBI gene;Acc:396248]
28. SLMO1 SLMO1 4357 1.488 - - - - - - 0.724 - - 0.764
29. CRMP1B CRMP1B 18633 1.464 - - 0.724 - - - - - - 0.740
30. PLPPR1 ENSGALG00000015542 3179 1.44 - - 0.729 - - - - - - 0.711 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
31. RAB22A ENSGALG00000007554 201 1.436 - - - - - - 0.729 0.707 - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
32. RASGEF1A ENSGALG00000002525 918 1.432 - - - - - 0.722 0.710 - - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
33. MAP1A ENSGALG00000008425, ENSGALG00000035587 1843 1.404 - - - - - 0.701 - - - 0.703 microtubule associated protein 1A, transcript variant X6
34. TRABD2A ENSGALG00000026395 704 0.927 - - - - - 0.927 - - - - TraB domain containing 2A, transcript variant X3
35. IRX1 ENSGALG00000030991 1474 0.901 - - - - - 0.901 - - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
36. ZIC3 ENSGALG00000031144 863 0.889 - - - - - 0.889 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
37. ISM1 ENSGALG00000009042 196 0.887 - - - - - 0.887 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
38. PAX-7 PAX-7 3856 0.886 - - - - - 0.886 - - - -
39. GHOX-7 GHOX-7 2555 0.885 - - - - - 0.885 - - - -
40. KCNK2 ENSGALG00000009687 1552 0.882 - - - - - - 0.882 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
41. NSG1 ENSGALG00000015010 5829 0.87 - - - - - 0.870 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
42. LRRC4C ENSGALG00000007948 9 0.863 - - - - - 0.863 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
43. AADAT ENSGALG00000009655 1692 0.861 - - - - - - 0.861 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
44. MAP2 ENSGALG00000002789 6597 0.857 - - - - - - - - - 0.857 microtubule associated protein 2, transcript variant X33
45. RASSF2 ENSGALG00000030432 4822 0.845 - - - - - 0.845 - - - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
46. MARCKSL1 ENSGALG00000032335 88728 0.844 - - - - - 0.844 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
47. BMP7 ENSGALG00000007668 6645 0.84 - - - - - 0.840 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
48. MYL4 ENSGALG00000000585 16982 0.839 - - - - - 0.839 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
49. TMEM130 ENSGALG00000003569 949 0.835 - - - - - - 0.835 - - - transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
50. AAGAB ENSGALG00000007887 142 0.833 - - - - - - 0.833 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
51. TRIT1 ENSGALG00000003851 1518 0.833 - - - - - - 0.833 - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
52. NTM ENSGALG00000001437 584 0.832 - - - - - 0.832 - - - - neurotrimin [Source:NCBI gene;Acc:395450]
53. MURC 3759 0.832 - - - - - 0.832 - - - - muscle related coiled-coil protein
54. CXCR4 ENSGALG00000012357 1320 0.831 - - - - - 0.831 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
55. NEFL ENSGALG00000000314 4883 0.829 - - - - - 0.829 - - - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
56. RTN1 ENSGALG00000012006 2438 0.828 - - - - - 0.828 - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
57. PPP1R1C ENSGALG00000008896 378 0.826 - - - - - 0.826 - - - - protein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]
58. FABP7 ENSGALG00000038933 6780 0.818 - - - - - 0.818 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
59. NEFM ENSGALG00000000317 6992 0.818 - - - - - 0.818 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
60. RNF170 ENSGALG00000015386 296 0.817 - - - - - - 0.817 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
61. ARPP19 ENSGALG00000017370 1720 0.817 - - - - - - 0.817 - - - cAMP regulated phosphoprotein 19 [Source:NCBI gene;Acc:768853]
62. FGFR3 ENSGALG00000015708 16853 0.817 - - - - - 0.817 - - - - fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
63. EPS15 ENSGALG00000010543 1598 0.816 - - - - - - 0.816 - - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
64. COL14A1 ENSGALG00000037675 2652 0.814 - - - - - 0.814 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
65. ZBTB16 ENSGALG00000038540 5544 0.812 - - - - - 0.812 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
66. CHST9 ENSGALG00000019489 21 0.81 - - - - - - 0.810 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
67. FAM46C 13 0.81 - - - - - - 0.810 - - - family with sequence similarity 46 member C
68. CBLN1 ENSGALG00000042664 15 0.81 - - - - - - 0.810 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
69. MAP3K19 ENSGALG00000028457 17 0.81 - - - - - - 0.810 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
70. MBL2 ENSGALG00000002507 17 0.81 - - - - - - 0.810 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
71. PANX1 ENSGALG00000039751 70 0.81 - - - - - - 0.810 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
72. LOC112532477 ENSGALG00000027520 40 0.808 - - - - - - 0.808 - - - fibrinogen-like protein 1-like protein
73. EFCAB7 ENSGALG00000010998 13 0.807 - - - - - - 0.807 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
74. HN1L HN1L 247 0.807 - - - - - - 0.807 - - -
75. ASH1L ENSGALG00000014638 803 0.806 - - - - - - 0.806 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
76. SLC2A9 ENSGALG00000014971 751 0.805 - - - - - - 0.805 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
77. H2A-VII ENSGALG00000027113, ENSGALG00000027315, ENSGALG00000028372, ENSGALG00000029941, ENSGALG00000031571, ENSGALG00000032645, ENSGALG00000035715 823 0.802 - - - - - - 0.802 - - - histone cluster 1, H2A-IV-like 4 [Source:NCBI gene;Acc:427895]
78. PTPN21 ENSGALG00000010616 129 0.802 - - - - - - 0.802 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
79. CFTR ENSGALG00000032986 424 0.802 - - - - - 0.802 - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
80. CSPG5 ENSGALG00000032184 991 0.801 - - - - - 0.801 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
81. GDPD4 ENSGALG00000000690 824 0.801 - - - - - 0.801 - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
82. KIAA1244 KIAA1244 62 0.801 - - - - - - 0.801 - - -
83. CAT-1 CAT-1 115 0.8 - - - - - - 0.800 - - -
84. TOR1A ENSGALG00000004165 4487 0.799 - - - - - - 0.799 - - - torsin family 1 member A [Source:NCBI gene;Acc:417190]
85. FOXRED1 ENSGALG00000046347 4176 0.799 - - - - - - 0.799 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
86. ADAP2 ENSGALG00000003319 134 0.798 - - - - - - 0.798 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
87. SCTR ENSGALG00000012106 49 0.798 - - - - - - 0.798 - - - secretin receptor [Source:NCBI gene;Acc:770943]
88. NFASC ENSGALG00000031776 4264 0.797 - - - - - 0.797 - - - - neurofascin [Source:NCBI gene;Acc:419824]
89. ENSGALG00000010963 ENSGALG00000010963 462 0.796 - - - - - - 0.796 - - -
90. SYT8 ENSGALG00000006602 369 0.796 - - - - - - 0.796 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
91. LYRM1 ENSGALG00000002273 1523 0.795 - - - - - - 0.795 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
92. DLL1 ENSGALG00000011182 1613 0.795 - - - - - 0.795 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
93. SLC16A14 ENSGALG00000002897 157 0.795 - - - - - - 0.795 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
94. USP42 ENSGALG00000003378 1392 0.794 - - - - - - 0.794 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
95. WDR35 157 0.792 - - - - - - 0.792 - - - WD repeat domain 35, transcript variant X1
96. ARHGAP12 ENSGALG00000007254 479 0.792 - - - - - - 0.792 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
97. SCRN1 ENSGALG00000011176 3783 0.79 - - - - - - - - - 0.790 secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
98. C17orf75 ENSGALG00000003434 4262 0.79 - - - - - 0.790 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
99. PHLDB1 ENSGALG00000040030 2423 0.789 - - - - - 0.789 - - - - pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]
100. ZFYVE16 ENSGALG00000015576 287 0.789 - - - - - - 0.789 - - - zinc finger FYVE-type containing 16, transcript variant X3

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA