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Results for NPAS3

Gene Name Gene ID Reads Annotation
NPAS3 ENSDARG00000109820 362 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]










Genes with expression patterns similar to NPAS3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. NPAS3 ENSDARG00000109820 362 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
2. CU179656.1 ENSDARG00000107086 270 3.338 0.882 0.969 - - - 0.722 0.765 - -
3. nmbb ENSDARG00000077167, ENSDARG00000115224 45 2.749 - 1.000 - - 0.975 0.774 - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
4. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 2.725 - 1.000 - - - 0.855 - 0.870 - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
5. si:ch211-152f6.6 si:ch211-152f6.6 278 2.627 0.745 0.946 - - - 0.936 - - -
6. skap1 ENSDARG00000001498, ENSDARG00000114047 55 2.616 - - - - 0.943 0.843 0.830 - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
7. gnb5b ENSDARG00000055377 98 2.615 0.862 0.898 - - - - - 0.855 - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
8. gng3 ENSDARG00000009553 2530 2.587 0.783 0.929 - - - 0.875 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
9. sv2bb ENSDARG00000060711 196 2.585 0.860 0.822 - - - 0.903 - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
10. jph3 ENSDARG00000102204 175 2.577 0.786 1.000 - - - 0.791 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
11. htr3a ENSDARG00000089212 51 2.569 0.723 1.000 - - - - - 0.846 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
12. syt11b ENSDARG00000056105 578 2.548 0.721 0.974 - - - 0.853 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
13. scn2b ENSDARG00000101713 796 2.485 0.708 0.909 - - - 0.868 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
14. lhx1a ENSDARG00000014018 958 2.471 - 0.903 - - - 0.790 - - 0.778 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
15. MCTP1 MCTP1 219 2.412 0.819 0.881 - - - 0.712 - - -
16. lbx1b ENSDARG00000018611 399 2.405 0.898 0.789 - - - 0.718 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
17. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.392 0.725 - - - - 0.870 - - 0.797 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
18. PCDH9 ENSDARG00000063264 1309 2.38 0.782 0.786 - - - - - 0.812 - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
19. dbx2 2971 2.376 0.789 0.781 - - - 0.806 - - - developing brain homeobox 2
20. cdk5r2a ENSDARG00000071011 167 2.373 0.833 - - - - 0.765 - 0.775 - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
21. cdk5r1b ENSDARG00000045087 2075 2.347 0.718 - - - - 0.822 - 0.807 - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
22. vamp1 ENSDARG00000031283 3094 2.342 0.802 - - - 0.741 0.799 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
23. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.323 - 0.713 - - - 0.851 - - 0.759 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
24. jag1a ENSDARG00000030289 1275 2.289 0.759 0.736 - - - 0.794 - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
25. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.247 - 0.788 - - - 0.717 - - 0.742 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
26. scn8aa ENSDARG00000005775 792 2.225 0.740 0.754 - - - 0.731 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
27. rufy3 ENSDARG00000029692 3031 2.189 0.709 0.746 - - - 0.734 - - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
28. pcdh2ac ENSDARG00000099783 325 2.133 - 0.710 - - - 0.708 - - 0.715 protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
29. KCNS3 KCNS3 82 1.958 - 1.000 - - 0.958 - - - -
30. KCNG2 ENSDARG00000035961 58 1.908 0.908 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
31. sox12 ENSDARG00000025847 681 1.877 0.877 1.000 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
32. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.858 0.949 0.909 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
33. nebl ENSDARG00000021200 40 1.848 - 1.000 - - - - - 0.848 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
34. KCNAB2 KCNAB2 129 1.825 0.825 1.000 - - - - - - -
35. TRPC4_1 TRPC4_1 212 1.823 0.823 1.000 - - - - - - -
36. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.816 - 1.000 - - - 0.816 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
37. entpd3 ENSDARG00000035309 263 1.805 0.910 0.895 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
38. cacng3b ENSDARG00000076401 91 1.8 - 1.000 - - - 0.800 - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
39. tmem179 ENSDARG00000013292 343 1.8 - 0.946 - - - 0.854 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
40. GJD2_1 GJD2_1 3045 1.793 - 1.000 - - - 0.793 - - -
41. NTRK3 NTRK3 163 1.781 0.781 1.000 - - - - - - -
42. plxnb3 ENSDARG00000032990 98 1.773 - - - - 0.876 0.897 - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
43. zbtb20 ENSDARG00000005586 195 1.767 - 1.000 - - - 0.767 - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
44. trim46b ENSDARG00000058649 54 1.766 0.766 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
45. ubox5 ENSDARG00000058563 161 1.766 - - - - 0.908 - - 0.858 - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
46. nlgn3b ENSDARG00000062376 171 1.765 0.907 - - - - 0.858 - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
47. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.761 0.924 0.837 - - - - - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
48. syt11a ENSDARG00000057913 1145 1.761 - 0.902 - - - - - 0.859 - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
49. prdm14 ENSDARG00000045371 106 1.76 - 1.000 - - - 0.760 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
50. khdrbs2 ENSDARG00000069469 160 1.758 - 1.000 - - - 0.758 - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
51. csmd2 ENSDARG00000001559 203 1.755 - - - - - 0.881 0.874 - - CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]
52. APBB3 ENSDARG00000053771 654 1.751 0.832 - - - - 0.919 - - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
53. soul5 ENSDARG00000075015 118 1.748 - - - - 0.968 - - 0.780 - heme-binding protein soul5 [Source:ZFIN;Acc:ZDB-GENE-110718-2]
54. ptf1a ENSDARG00000014479 349 1.742 - 1.000 - - - 0.742 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
55. bhlhe22 ENSDARG00000058039 1673 1.742 0.817 - - - - 0.925 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
56. PRKAR2B ENSDARG00000036446 812 1.737 - - - - 0.855 0.882 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
57. TUBB2A TUBB2A 142 1.736 0.736 1.000 - - - - - - -
58. scrt2 ENSDARG00000056175 4331 1.734 0.839 0.895 - - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
59. lbx1a ENSDARG00000018321 634 1.732 0.938 - - - - 0.794 - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
60. CT573433.2 CT573433.2 115 1.725 - 1.000 - - - 0.725 - - -
61. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.725 - 0.943 - - - - 0.782 - - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
62. gpr173 ENSDARG00000042922 238 1.724 - - - - - 0.816 - 0.908 - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
63. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1.724 - 1.000 - - - 0.724 - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
64. slc17a6b ENSDARG00000041150 823 1.724 0.724 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
65. CABZ01030107.1 ENSDARG00000058631 52 1.722 - 1.000 - - - 0.722 - - -
66. fgf13b ENSDARG00000056633 455 1.721 0.957 - - - - 0.764 - - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
67. neflb ENSDARG00000012426 298 1.713 - 1.000 - - - 0.713 - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
68. uckl1a ENSDARG00000001686 21 1.712 - 1.000 - - - 0.712 - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
69. penka ENSDARG00000004869 161 1.712 0.721 0.991 - - - - - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
70. SCAMP5 SCAMP5 19 1.711 - 1.000 - - - 0.711 - - -
71. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.708 - 1.000 - - - 0.708 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
72. C8H1orf106 C8H1orf106 2690 1.703 0.802 - - - - 0.901 - - -
73. ZBTB26 ENSDARG00000028949 129 1.702 - 0.971 - - - 0.731 - - - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
74. LMTK3 LMTK3 222 1.7 0.927 - - - - 0.773 - - -
75. btbd3b ENSDARG00000087517 107 1.698 - - - - - 0.841 - 0.857 - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
76. neto1l ENSDARG00000071596 57 1.698 0.877 - - - - 0.821 - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
77. insm1b ENSDARG00000053301 2032 1.687 - - - - - 0.907 - - 0.780 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
78. CABZ01080599.2 CABZ01080599.2 192 1.683 - - - - 0.919 0.764 - - -
79. syngr3a ENSDARG00000014871 405 1.679 - 0.806 - - - 0.873 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
80. amph ENSDARG00000007663 599 1.675 0.766 0.909 - - - - - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
81. scube2 ENSDARG00000037362 2833 1.671 0.870 - - - - 0.801 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
82. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.667 0.726 - - - - 0.941 - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
83. CABZ01072828.1 CABZ01072828.1 67 1.663 - 0.889 - - 0.774 - - - -
84. RAB39B RAB39B 482 1.663 - - - - 0.811 0.852 - - -
85. HSPA4L ENSDARG00000053544 363 1.662 - 0.826 - - 0.836 - - - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
86. SSX2IP SSX2IP 316 1.661 - - - - - 0.847 - 0.814 -
87. nxph1 ENSDARG00000033447 182 1.661 0.776 - - - 0.885 - - - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
88. nhlh2 ENSDARG00000025495 1860 1.655 - - - - - 0.934 - - 0.721 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
89. rgs7 rgs7 208 1.654 0.708 0.946 - - - - - - -
90. rbfox3 rbfox3 1443 1.649 - 0.833 - - - 0.816 - - -
91. mapk11 ENSDARG00000045836 846 1.634 0.791 - - - - 0.843 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
92. syt12 ENSDARG00000101776 215 1.633 - - - - 0.833 0.800 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
93. cspg5a ENSDARG00000069981 1699 1.632 0.831 - - - - 0.801 - - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
94. zgc:110699 ENSDARG00000017474 381 1.628 0.817 - - - - 0.811 - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
95. nrxn2b ENSDARG00000063150 343 1.627 - - - - - 0.826 0.801 - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
96. zic6 ENSDARG00000071496 402 1.627 - 0.907 - - - 0.720 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
97. tctex1d2 ENSDARG00000054255 320 1.625 - - - - 0.849 0.776 - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
98. SV2B SV2B 208 1.625 0.716 0.909 - - - - - - -
99. INA INA 950 1.622 0.876 - - - - 0.746 - - -
100. SPTBN4_1 ENSDARG00000092624 473 1.618 - - - - - 0.881 - - 0.737 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]

There are 1807 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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