Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NLE1

Gene Name Gene ID Reads Annotation
NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 notchless homolog 1, transcript variant X1











Genes with expression patterns similar to NLE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 notchless homolog 1, transcript variant X1
2. ZNF608 ENSGALG00000005016 273 1.497 - - - - - - 0.726 - 0.771 - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
3. AHSA2 1504 0.893 - - - - - - - - 0.893 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
4. LAMA5 486 0.884 - - - - - - - - 0.884 - laminin subunit alpha 5, transcript variant X3
5. VPS33A ENSGALG00000004440 2030 0.881 - - - - - - - - 0.881 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
6. NBR1 ENSGALG00000002765 629 0.867 - - - - - - - - 0.867 - NBR1, autophagy cargo receptor [Source:HGNC Symbol;Acc:HGNC:6746]
7. ASNS ENSGALG00000009748 11822 0.867 - - - - - - - - 0.867 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
8. GALT ENSGALG00000026195 2002 0.866 - - - - - - - - 0.866 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
9. EPB41 ENSGALG00000001329 787 0.865 - - - - - - 0.865 - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
10. GNA12 ENSGALG00000004368 692 0.864 - - - - - - - - 0.864 - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
11. NUDT6 ENSGALG00000011834 1309 0.861 - - - - - - - - 0.861 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
12. CCDC171 ENSGALG00000015103 349 0.861 - - - - - - - - 0.861 - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
13. CLP1 ENSGALG00000007370 2047 0.858 - - - - - - - - 0.858 - cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
14. TTPA ENSGALG00000030031 500 0.855 - - - - - - - - 0.855 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
15. DYNLT3 ENSGALG00000016259 340 0.85 - - - - - - - - 0.850 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
16. CARKD CARKD 2914 0.85 - - - - - - - - 0.850 -
17. GGA.16412 GGA.16412 846 0.848 - - - - - - - - 0.848 -
18. VTI1A ENSGALG00000008880 279 0.847 - - - - - - - - 0.847 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
19. ENSGALG00000019710 ENSGALG00000019710 212 0.843 - - - - - - - - 0.843 -
20. ACL ACL 1813 0.841 - - - - - - - - 0.841 -
21. REXO4 ENSGALG00000030609 2926 0.84 - - - - - - - - 0.840 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
22. GPSM1 ENSGALG00000001797 943 0.839 - - - - - - - - 0.839 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
23. GNG11 ENSGALG00000029899 327 0.839 - - - - - - - - 0.839 - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
24. SMPDL3B ENSGALG00000000737 223 0.838 - - - - - - - - 0.838 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
25. CCDC104 CCDC104 6584 0.837 - - - - - - - - 0.837 -
26. CYP20A1 ENSGALG00000008730 930 0.836 - - - - - - - - 0.836 - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
27. C1GALT1 ENSGALG00000009752 7148 0.836 - - - - - - - - 0.836 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
28. gga-mir-1466 ENSGALG00000025170 487 0.834 - - - - - - - - 0.834 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
29. DARS ENSGALG00000012355 2887 0.833 - - - - - - - - 0.833 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
30. CLCN7 ENSGALG00000030826 3173 0.832 - - - - - - - - 0.832 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
31. PJA2 ENSGALG00000000264 1574 0.829 - - - - - - - - 0.829 - praja ring finger ubiquitin ligase 2, transcript variant X1
32. LEMD3 ENSGALG00000009873 347 0.827 - - - - - - - - 0.827 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
33. UPB1 ENSGALG00000006627 139 0.827 - - - - - - - - 0.827 - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
34. DIAPH1 DIAPH1 357 0.827 - - - - - - - - 0.827 -
35. DENND6A ENSGALG00000005656 831 0.824 - - - - - - - - 0.824 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
36. RPS6KA5 ENSGALG00000030580 218 0.822 - - - - - - - - 0.822 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
37. PSMG2 ENSGALG00000013863 351 0.822 - - - - - - - - 0.822 - proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
38. TRMT12 ENSGALG00000006773 707 0.822 - - - - - - - - 0.822 - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
39. PPIP5K2 ENSGALG00000015264 862 0.82 - - - - - - - - 0.820 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
40. TMEM69 ENSGALG00000010279 716 0.819 - - - - - - - - 0.819 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
41. SLC7A6OS ENSGALG00000035575 2878 0.816 - - - - - - - - 0.816 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
42. KIF20B 554 0.815 - - - - - - - - 0.815 - kinesin family member 20B, transcript variant X8
43. PPP1R13B ENSGALG00000011548 88 0.815 - - - - - - - - 0.815 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
44. TMEM177 ENSGALG00000011593 311 0.814 - - - - - - - - 0.814 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
45. gga-mir-1306 ENSGALG00000025271 1231 0.814 - - - - - - 0.814 - - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
46. ENSGALG00000020497 ENSGALG00000020497 446 0.811 - - - - - - - - 0.811 -
47. TVP23A ENSGALG00000007216 275 0.81 - - - - - - - - 0.810 - trans-golgi network vesicle protein 23 homolog A [Source:HGNC Symbol;Acc:HGNC:20398]
48. MYCN ENSGALG00000016462 1930 0.806 - - - - - - - - 0.806 - MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
49. EPHB2 ENSGALG00000004741 390 0.806 - - - - - - - - 0.806 - EPH receptor B2 [Source:NCBI gene;Acc:396513]
50. RNASEH1 ENSGALG00000016389 2694 0.805 - - - - - - - - 0.805 - ribonuclease H1 [Source:NCBI gene;Acc:395848]
51. ELF3 ENSGALG00000000616 217 0.805 - - - - - - 0.805 - - - E74 like ETS transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3318]
52. GEM ENSGALG00000032506 439 0.804 - - - - - - - - 0.804 - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
53. ANKRD54 ENSGALG00000012299 1588 0.804 - - - - - - - - 0.804 - ankyrin repeat domain 54, transcript variant X1
54. CGN ENSGALG00000000920 407 0.803 - - - - - - - - 0.803 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
55. IPO8 ENSGALG00000012953 499 0.803 - - - - - - - - 0.803 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
56. PDCD4 ENSGALG00000008700 574 0.802 - - - - - - - - 0.802 - programmed cell death 4 [Source:NCBI gene;Acc:374191]
57. NCAPG ENSGALG00000014425 929 0.802 - - - - - - - - 0.802 - non-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]
58. DLG3 ENSGALG00000041900 3016 0.802 - - - - - - - - 0.802 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
59. RAD21 ENSGALG00000029523 25658 0.798 - - - - - - - - 0.798 - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
60. ENSGALG00000014946 ENSGALG00000014946 40 0.797 - - - - - - - - 0.797 -
61. RREB1 ENSGALG00000012799 125 0.797 - - - - - - - - 0.797 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
62. FAM221A ENSGALG00000010977 695 0.796 - - - - - - - - 0.796 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
63. ITGB1BP2 ENSGALG00000005493 628 0.796 - - - - - - - - 0.796 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
64. CDERMO-1 CDERMO-1 279 0.795 - - - - - - - - 0.795 -
65. TDRD7 ENSGALG00000012350 594 0.794 - - - - - - - - 0.794 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
66. GSTA GSTA 3130 0.794 - - - - - - - - 0.794 -
67. gga-mir-1725 gga-mir-1725 178 0.792 - - - - - - - - 0.792 -
68. ENSGALG00000008689 ENSGALG00000008689 232 0.792 - - - - - - - - 0.792 -
69. WDFY1 ENSGALG00000005158 2512 0.791 - - - - - - - - 0.791 - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
70. HSDL1 ENSGALG00000003273 1108 0.79 - - - - - - - - 0.790 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
71. PCDH20 ENSGALG00000016934 187 0.79 - - - - - - - - 0.790 - protocadherin 20
72. CCDC103 CCDC103 362 0.787 - - - - - - - - 0.787 -
73. ARL14EP ENSGALG00000012139 4690 0.785 - - - - - - - - 0.785 - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
74. KIAA1211 ENSGALG00000013771 135 0.785 - - - - - - - - 0.785 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
75. CEP70 ENSGALG00000012087 7992 0.785 - - - - - - - - 0.785 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
76. VAPA ENSGALG00000039455 1665 0.784 - - - - - - 0.784 - - - VAMP associated protein A, transcript variant X1
77. DTWD2 ENSGALG00000002250 1604 0.784 - - - - - - - - 0.784 - DTW domain containing 2 [Source:NCBI gene;Acc:427386]
78. LRRC16A LRRC16A 2041 0.784 - - - - - - - - 0.784 -
79. PLEKHO1 ENSGALG00000037540 1804 0.784 - - - - - - 0.784 - - - pleckstrin homology domain containing O1 [Source:NCBI gene;Acc:426108]
80. CEP104 ENSGALG00000000978 1130 0.784 - - - - - - - - 0.784 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
81. C16orf93 C16orf93 3351 0.783 - - - - - - - - 0.783 -
82. TMEM59 ENSGALG00000010746 4669 0.783 - - - - - - - - 0.783 - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
83. ARHGEF4 ENSGALG00000002193 558 0.783 - - - - - - - - 0.783 - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
84. ALS2 ENSGALG00000008415 2576 0.782 - - - - - - - - 0.782 - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
85. TSC22D3 ENSGALG00000027069 1222 0.78 - - - - - - - - 0.780 - TSC22 domain family member 3 [Source:NCBI gene;Acc:768091]
86. NLGN4 NLGN4 283 0.779 - - - - - - 0.779 - - -
87. FAAHL ENSGALG00000015059 1632 0.779 - - - - - - 0.779 - - - fatty acid amide hydrolase-like
88. CRIM1 ENSGALG00000032640 506 0.778 - - - - - - 0.778 - - - cysteine rich transmembrane BMP regulator 1 [Source:NCBI gene;Acc:395067]
89. NCF1 ENSGALG00000001189 334 0.778 - - - - - - - - 0.778 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
90. SGK1 ENSGALG00000013971 2608 0.776 - - - - - - - - 0.776 - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
91. TAPT1 ENSGALG00000014486 2022 0.776 - - - - - - - - 0.776 - transmembrane anterior posterior transformation 1 [Source:NCBI gene;Acc:422824]
92. LHFPL5 ENSGALG00000039170 247 0.775 - - - - - - 0.775 - - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
93. SNW1 ENSGALG00000010501 17767 0.773 - - - - - - - - 0.773 - SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
94. FKBP8 ENSGALG00000003357 942 0.772 - - - - - - - - 0.772 - FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
95. GTF3C4 ENSGALG00000031016 1221 0.772 - - - - - - - - 0.772 - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
96. LGI1 ENSGALG00000031720 287 0.772 - - - - - - 0.772 - - - leucine rich glioma inactivated 1 [Source:NCBI gene;Acc:423802]
97. TULP3 ENSGALG00000013424 2064 0.771 - - - - - - - - 0.771 - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
98. LRRIQ1 147 0.77 - - - - - - 0.770 - - - leucine rich repeats and IQ motif containing 1, transcript variant X2
99. EYA2 ENSGALG00000004508 939 0.77 - - - - - - 0.770 - - - Gallus gallus EYA transcriptional coactivator and phosphatase 2 (EYA2), mRNA. [Source:RefSeq mRNA;Acc:NM_204915]
100. MPP3 ENSGALG00000042521 1372 0.769 - - - - - - - - 0.769 - membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]

There are 160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA