Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NKX1-1

Gene Name Gene ID Reads Annotation
NKX1-1 ENSGALG00000035650 187 NK1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:24975]











Genes with expression patterns similar to NKX1-1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NKX1-1 ENSGALG00000035650 187 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:24975]
2. UNC13D ENSGALG00000002234 44 1.779 - - - 0.867 - - - 0.912 - - unc-13 homolog D [Source:HGNC Symbol;Acc:HGNC:23147]
3. BPIL ENSGALG00000021025 8 1.661 - - - - - - 0.714 0.947 - - bactericidal permeability-increasing protein-like, transcript variant X2
4. XYLB ENSGALG00000006173 23 1.497 - - 0.718 - - 0.779 - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
5. LEPREL1 LEPREL1 195 1.46 - - 0.721 - - - - 0.739 - -
6. CCP110 ENSGALG00000006925 59 0.979 - - - - - - - 0.979 - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
7. ENSGALG00000006389 ENSGALG00000006389 41 0.967 - - - - - - - 0.967 - -
8. NCLN ENSGALG00000013369 37 0.966 - - - - - - - 0.966 - - nicalin [Source:NCBI gene;Acc:426048]
9. FOXP2 ENSGALG00000009424 101 0.96 - - - - - - - 0.960 - - forkhead box P2 [Source:HGNC Symbol;Acc:HGNC:13875]
10. ATP6AP1L ENSGALG00000015618 476 0.958 - - - - - - - 0.958 - - ATPase H+ transporting accessory protein 1 like [Source:HGNC Symbol;Acc:HGNC:28091]
11. MOGAT1 ENSGALG00000005217 12 0.955 - - - - - - - 0.955 - - monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
12. A4GNT ENSGALG00000006600 11 0.955 - - - - - - - 0.955 - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
13. SLC16A12 ENSGALG00000006421 4 0.955 - - - - - - - 0.955 - - solute carrier family 16 member 12 [Source:HGNC Symbol;Acc:HGNC:23094]
14. PLXNB1 23 0.955 - - - - - - - 0.955 - - plexin B1, transcript variant X2
15. HINFP ENSGALG00000006806 15 0.955 - - - - - - - 0.955 - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
16. ATP8A2 ENSGALG00000017106 31 0.955 - - - - - - - 0.955 - - ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]
17. FBLN7 ENSGALG00000046358 27 0.95 - - - - - - - 0.950 - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
18. PDE4DIP 277 0.948 - - - - - - - 0.948 - - phosphodiesterase 4D interacting protein
19. INHBA ENSGALG00000034616 49 0.948 - - - - - - - 0.948 - - inhibin subunit beta A [Source:NCBI gene;Acc:396361]
20. HTR1F ENSGALG00000015494 7 0.942 - - - - - - - 0.942 - - 5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]
21. LOC422224 ENSGALG00000005964 204 0.942 - - - - - - - 0.942 - - family with sequence similarity 162, member B, transcript variant X2
22. C22orf39 ENSGALG00000044654 1364 0.936 - - - - - - - 0.936 - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
23. TBX2 ENSGALG00000034297 57 0.928 - - - - - - - 0.928 - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
24. CFAP206 ENSGALG00000015810 16 0.928 - - - - - - - 0.928 - - cilia and flagella associated protein 206, transcript variant X3
25. KLF12 ENSGALG00000016926 197 0.928 - - - - - - - 0.928 - - Kruppel like factor 12 [Source:HGNC Symbol;Acc:HGNC:6346]
26. TMEM117 ENSGALG00000009596 48 0.923 - - - - - - - 0.923 - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
27. MS4A15 MS4A15 151 0.921 - - - - - - - 0.921 - -
28. TM6SF2 ENSGALG00000029015 109 0.92 - - - 0.920 - - - - - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
29. MOB1A ENSGALG00000039203 240 0.916 - - - - - - - 0.916 - - MOB kinase activator 1A [Source:HGNC Symbol;Acc:HGNC:16015]
30. GYS2 ENSGALG00000013265 14 0.913 - - - - - - - 0.913 - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
31. APLNR ENSGALG00000004841 176 0.906 - - - - - - - 0.906 - - apelin receptor [Source:HGNC Symbol;Acc:HGNC:339]
32. TULP4 ENSGALG00000037377 563 0.902 - - - - - - - 0.902 - - tubby like protein 4 [Source:HGNC Symbol;Acc:HGNC:15530]
33. MRAS ENSGALG00000011592 1264 0.902 - - - - - - - 0.902 - - muscle RAS oncogene homolog [Source:NCBI gene;Acc:395149]
34. KPNA5 ENSGALG00000014937 28 0.902 - - - - - - - 0.902 - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
35. SPP2 ENSGALG00000004129 34 0.901 - - - - 0.901 - - - - - secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
36. DNAJB4 ENSGALG00000008916 68 0.898 - - - - - - - 0.898 - - DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
37. TMEM52B ENSGALG00000034698 169 0.896 - - - - - - - 0.896 - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
38. PIFO ENSGALG00000023763 11 0.891 - - - - - - - 0.891 - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
39. SEPP1 SEPP1 35 0.889 - - - - - - - 0.889 - -
40. PITPNM2 ENSGALG00000003645 17 0.885 - - - - - - - 0.885 - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
41. L3MBTL3 ENSGALG00000034030 113 0.883 - - - - - - - 0.883 - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
42. FANCD2 ENSGALG00000003720 634 0.878 - - - - - - - 0.878 - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
43. ZNF362 ENSGALG00000026558 11 0.875 - - - - 0.875 - - - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
44. LOC431653 ENSGALG00000025921 4 0.875 - - - - 0.875 - - - - - LOC431653, transcript variant X3
45. ANKRD22 ENSGALG00000028250 130 0.875 - - - - 0.875 - - - - - ankyrin repeat domain 22 [Source:NCBI gene;Acc:771419]
46. CTNNAL1 ENSGALG00000013207 44 0.875 - - - - 0.875 - - - - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
47. FUCA2 ENSGALG00000013773 67 0.875 - - - - - - - 0.875 - - alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
48. WEE1 ENSGALG00000005769 294 0.875 - - - - 0.875 - - - - - WEE1 G2 checkpoint kinase [Source:NCBI gene;Acc:423045]
49. ENSGALG00000027744 ENSGALG00000027744 2 0.875 - - - - 0.875 - - - - -
50. IRF10 IRF10 623 0.872 - - - - - - - 0.872 - -
51. AQP11 ENSGALG00000031734 4 0.87 - - - - 0.870 - - - - - aquaporin 11 [Source:HGNC Symbol;Acc:HGNC:19940]
52. DIRC2 ENSGALG00000032632 137 0.866 - - - - - - - 0.866 - - disrupted in renal carcinoma 2 [Source:HGNC Symbol;Acc:HGNC:16628]
53. NADK2 ENSGALG00000003558 79 0.863 - - - - - - - 0.863 - - NAD kinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26404]
54. TLR4 ENSGALG00000007001 116 0.86 - - - - - - - 0.860 - - toll like receptor 4 [Source:NCBI gene;Acc:417241]
55. UNC93B1 ENSGALG00000039347 342 0.859 - - - - - - - 0.859 - - unc-93 homolog B1 (C. elegans), transcript variant X6
56. ENSGALG00000001629 ENSGALG00000001629 31 0.856 - - - - 0.856 - - - - -
57. GCH1 ENSGALG00000012200 445 0.856 - - - - - - - 0.856 - - GTP cyclohydrolase 1 [Source:NCBI gene;Acc:396146]
58. DMRTB1 ENSGALG00000029023 35 0.852 - - - - - - - 0.852 - - DMRT like family B with proline rich C-terminal 1 [Source:NCBI gene;Acc:429107]
59. RTCA 1995 0.85 - - - - - - - 0.850 - - RNA 3'-terminal phosphate cyclase
60. ID3 ENSGALG00000035317 52 0.847 - - 0.847 - - - - - - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
61. FASTKD1 ENSGALG00000009841 45 0.845 - - - - 0.845 - - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
62. ENSGALG00000028038 ENSGALG00000028038 9 0.844 - - 0.844 - - - - - - -
63. PODN ENSGALG00000021869 71 0.844 - - - - - - - 0.844 - - podocan [Source:HGNC Symbol;Acc:HGNC:23174]
64. PNPLA2 ENSGALG00000014569 7 0.844 - - 0.844 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
65. ENSGALG00000026155 ENSGALG00000026155 49 0.843 - - - - - - - 0.843 - -
66. SPINK2 SPINK2 202 0.838 - - - - - - - 0.838 - -
67. DLG2 56 0.836 - - - - - - - 0.836 - - discs large MAGUK scaffold protein 2, transcript variant X24
68. TRIM13 ENSGALG00000017011 92 0.835 - - - - - - - 0.835 - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
69. CA5B ENSGALG00000005855 172 0.835 - - - - 0.835 - - - - - carbonic anhydrase 5B [Source:HGNC Symbol;Acc:HGNC:1378]
70. FBXO16 7 0.835 - - 0.835 - - - - - - - F-box protein 16, transcript variant X1
71. ASTL ENSGALG00000037220 2775 0.833 - - 0.833 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
72. CD34 ENSGALG00000001177 48 0.832 - - - - - - - 0.832 - - CD34 molecule, transcript variant X3
73. NDEL1 ENSGALG00000001163 16 0.832 - - - - - 0.832 - - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
74. TMEM161B ENSGALG00000010896 36 0.831 - - 0.831 - - - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
75. SNX20 ENSGALG00000038374 406 0.83 - - - - - - - 0.830 - - sorting nexin 20 [Source:NCBI gene;Acc:415726]
76. NKIRAS1 ENSGALG00000011289 311 0.83 - - - - - - - 0.830 - - NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
77. STAMBPL1 ENSGALG00000006331 38 0.829 - - - - 0.829 - - - - - STAM binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:24105]
78. RASL12 ENSGALG00000007349 88 0.829 - - - - - - 0.829 - - - RAS like family 12 [Source:HGNC Symbol;Acc:HGNC:30289]
79. C8orf34 ENSGALG00000034561 286 0.824 - - - - - - - 0.824 - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
80. ARHGEF10L ENSGALG00000043128 171 0.82 - - - - - - - 0.820 - - Rho guanine nucleotide exchange factor 10 like [Source:HGNC Symbol;Acc:HGNC:25540]
81. NPY5R ENSGALG00000009499 4 0.819 - - - 0.819 - - - - - - neuropeptide Y receptor Y5 [Source:NCBI gene;Acc:422419]
82. CTSB ENSGALG00000030016 177 0.818 - - - - - - - - 0.818 - cathepsin B [Source:NCBI gene;Acc:396329]
83. HSD3B2 HSD3B2 55 0.816 - - - - 0.816 - - - - -
84. RGMB ENSGALG00000015284 14 0.815 - - 0.815 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
85. IQCH ENSGALG00000007909 128 0.812 - - - - - - - 0.812 - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
86. SULT1B1 ENSGALG00000023120 523 0.811 - - - - - - - 0.811 - - sulfotransferase family cytosolic 1B member 1 [Source:NCBI gene;Acc:395227]
87. PTGS2 ENSGALG00000033635 426 0.808 - - 0.808 - - - - - - - prostaglandin-endoperoxide synthase 2 [Source:NCBI gene;Acc:396451]
88. KLHL23 ENSGALG00000020737 13 0.808 - - 0.808 - - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
89. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.808 - - - - - - - 0.808 - - pseudouridylate synthase-like 1, transcript variant X8
90. TRPA1 ENSGALG00000034751 148 0.807 - - 0.807 - - - - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
91. EPHA10 ENSGALG00000001912 5 0.806 - - 0.806 - - - - - - - EPH receptor A10, transcript variant X1
92. ENSGALG00000020389 ENSGALG00000020389 5 0.806 - - 0.806 - - - - - - -
93. SLC6A18 ENSGALG00000013180 6 0.806 - - 0.806 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
94. ENSGALG00000019568 ENSGALG00000019568 25 0.805 - - 0.805 - - - - - - -
95. CCDC30 15 0.802 - - 0.802 - - - - - - - coiled-coil domain containing 30, transcript variant X4
96. FST ENSGALG00000014908 3182 0.801 - - - - - - - 0.801 - - follistatin [Source:NCBI gene;Acc:396119]
97. HOMER2 ENSGALG00000006008 973 0.797 - - - - - - - 0.797 - - homer scaffold protein 2 [Source:HGNC Symbol;Acc:HGNC:17513]
98. ENPP6 ENSGALG00000010645 272 0.794 - - - - 0.794 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]
99. ENSGALG00000017269 ENSGALG00000017269 13 0.794 - - 0.794 - - - - - - -
100. TLR3 ENSGALG00000013468 35 0.793 - - - - - - - 0.793 - - toll like receptor 3 [Source:NCBI gene;Acc:422720]

There are 190 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA