Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for NKRF

Gene Name Gene ID Reads Annotation
NKRF ENSGALG00000008645 3531 NFKB repressing factor [Source:NCBI gene;Acc:422370]











Genes with expression patterns similar to NKRF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NKRF ENSGALG00000008645 3531 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NFKB repressing factor [Source:NCBI gene;Acc:422370]
2. GMFB ENSGALG00000012208 894 1.726 - - - - - - - 0.938 0.788 - glia maturation factor beta [Source:NCBI gene;Acc:423560]
3. C16orf93 C16orf93 3351 1.701 - - - - - - - 0.942 0.759 -
4. COMT ENSGALG00000002024 2483 1.639 - - - - - - 0.852 - 0.787 - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
5. DPM2 ENSGALG00000005066 9121 1.59 - - - - - - 0.710 0.880 - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
6. ARPP19 ENSGALG00000017370 1720 1.519 - - - - - - 0.766 - - 0.753 cAMP regulated phosphoprotein 19 [Source:NCBI gene;Acc:768853]
7. CCNL2 ENSGALG00000001551 2620 1.501 - - - - - - 0.717 - 0.784 - cyclin L2 [Source:NCBI gene;Acc:395124]
8. SMARCA5 ENSGALG00000009913 20059 1.473 - - - - - - 0.705 0.768 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
9. TFDP1 ENSGALG00000016823 17019 1.425 - - - - - - 0.712 0.713 - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
10. GTSE1 ENSGALG00000004897 2865 0.965 - - - - - - - 0.965 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
11. PAXBP1 ENSGALG00000036833 5573 0.964 - - - - - - - 0.964 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
12. CNOT2 ENSGALG00000010042 7612 0.964 - - - - - - - 0.964 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
13. FBXL7 ENSGALG00000031947 2480 0.961 - - - - - - - 0.961 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
14. FAM160B1 ENSGALG00000031404 3153 0.961 - - - - - - - 0.961 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
15. VDAC2 ENSGALG00000005002 12592 0.961 - - - - - - - 0.961 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
16. ACTR3B ENSGALG00000006292 2235 0.96 - - - - - - - 0.960 - - ARP3 actin related protein 3 homolog B, transcript variant X1
17. KIAA1551 ENSGALG00000045168 3435 0.96 - - - - - - - 0.960 - - KIAA1551, transcript variant X1
18. TSPAN5 ENSGALG00000012227 8703 0.958 - - - - - - - 0.958 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
19. CCDC75 CCDC75 4865 0.957 - - - - - - - 0.957 - -
20. SECISBP2 ENSGALG00000010694 6990 0.957 - - - - - - - 0.957 - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
21. SLC37A4 ENSGALG00000007716 2263 0.957 - - - - - - - 0.957 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
22. RBM34 ENSGALG00000029915 5618 0.956 - - - - - - - 0.956 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
23. TADA1L TADA1L 6659 0.956 - - - - - - - 0.956 - -
24. MED20 ENSGALG00000003474 4583 0.956 - - - - - - - 0.956 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
25. BRF1 ENSGALG00000011705 3406 0.955 - - - - - - - 0.955 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
26. SMN ENSGALG00000002430 7515 0.955 - - - - - - - 0.955 - - survival of motor neuron [Source:NCBI gene;Acc:374025]
27. KIF3B ENSGALG00000006604 2968 0.954 - - - - - - - 0.954 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
28. SUPT4H1 ENSGALG00000000944 8675 0.954 - - - - - - - 0.954 - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
29. CDC37L1 ENSGALG00000014448 2283 0.953 - - - - - - - 0.953 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
30. ST14 ENSGALG00000001331 1655 0.953 - - - - - - - 0.953 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
31. SURF2 ENSGALG00000003181 3500 0.952 - - - - - - - 0.952 - - surfeit 2 [Source:NCBI gene;Acc:417156]
32. AP1G1 12403 0.95 - - - - - - - 0.950 - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
33. CAMK2G ENSGALG00000005088 5037 0.949 - - - - - - - 0.949 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
34. WBP4 ENSGALG00000016949 5858 0.949 - - - - - - - 0.949 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
35. SEMA3C ENSGALG00000040444 5404 0.949 - - - - - - - 0.949 - - semaphorin 3C [Source:NCBI gene;Acc:374090]
36. SIAH2 ENSGALG00000010395 2126 0.948 - - - - - - - 0.948 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
37. TRAPPC12 ENSGALG00000016387 2593 0.947 - - - - - - - 0.947 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
38. MMP17 3885 0.946 - - - - - - - 0.946 - - matrix metallopeptidase 17
39. SENP2 ENSGALG00000031128 1162 0.945 - - - - - - - 0.945 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
40. POLR1E ENSGALG00000005395 8953 0.945 - - - - - - - 0.945 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
41. ATP6V0E2 ENSGALG00000020754 2648 0.945 - - - - - - - 0.945 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
42. CCNI ENSGALG00000011457 3203 0.944 - - - - - - - 0.944 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
43. ZC3H11A ENSGALG00000000541 2712 0.944 - - - - - - - 0.944 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
44. BOC ENSGALG00000015152 4868 0.944 - - - - - - - 0.944 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
45. CLASP2 ENSGALG00000032647 1821 0.944 - - - - - - - 0.944 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
46. IBA57 ENSGALG00000005328 4362 0.944 - - - - - - - 0.944 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
47. C5H15ORF57 C5H15ORF57 4113 0.944 - - - - - - - 0.944 - -
48. PNPT1 ENSGALG00000043545 1306 0.944 - - - - - - - 0.944 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
49. GPR155 ENSGALG00000014209 1281 0.943 - - - - - - - 0.943 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
50. ENSGALG00000005785 ENSGALG00000005785 1570 0.942 - - - - - - - 0.942 - -
51. TBC1D16 ENSGALG00000007054 2324 0.942 - - - - - - - 0.942 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
52. MAN1A1 ENSGALG00000014878 1061 0.942 - - - - - - - 0.942 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
53. COQ5 ENSGALG00000007185 5614 0.942 - - - - - - - 0.942 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
54. MED14 ENSGALG00000016238 4685 0.942 - - - - - - - 0.942 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
55. ECHDC3 ENSGALG00000006690 1299 0.942 - - - - - - - 0.942 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
56. TBC1D19 ENSGALG00000029673 1868 0.942 - - - - - - - 0.942 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
57. ASAP2 ENSGALG00000016419 1393 0.942 - - - - - - - 0.942 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
58. LMO4 ENSGALG00000006252 3686 0.941 - - - - - - - 0.941 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
59. UBA3 ENSGALG00000013410 6923 0.941 - - - - - - - 0.941 - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
60. NCDN ENSGALG00000002408 6180 0.941 - - - - - - - 0.941 - - neurochondrin [Source:NCBI gene;Acc:419633]
61. LRRC42 ENSGALG00000010743 384 0.94 - - - - - - - 0.940 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
62. SLC4A3 ENSGALG00000011224 2161 0.94 - - - - - - - 0.940 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
63. N4BP2L1 ENSGALG00000017072 1371 0.94 - - - - - - - 0.940 - - NEDD4 binding protein 2 like 1, transcript variant X2
64. THAP4 ENSGALG00000006283 1707 0.939 - - - - - - - 0.939 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
65. DIABLO ENSGALG00000004412 9499 0.938 - - - - - - - 0.938 - - diablo IAP-binding mitochondrial protein, transcript variant X3
66. CLIC4 ENSGALG00000001262 11497 0.938 - - - - - - - 0.938 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
67. NGFR ENSGALG00000035950 13452 0.938 - - - - - - - 0.938 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
68. TTC17 ENSGALG00000039558 3301 0.937 - - - - - - - 0.937 - - tetratricopeptide repeat domain 17
69. C7H2ORF76 ENSGALG00000012113 1947 0.936 - - - - - - - 0.936 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
70. ABTB1 ENSGALG00000005999 2446 0.936 - - - - - - - 0.936 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
71. GHR_1 ENSGALG00000014855 198 0.935 - - - - - - - 0.935 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
72. ALDH6 ALDH6 771 0.935 - - - - - - - 0.935 - -
73. ENSGALG00000026309 ENSGALG00000026309 360 0.934 - - - - - - - 0.934 - -
74. BIN1 ENSGALG00000011541 2273 0.934 - - - - - - - 0.934 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
75. xcc-b100_1894L ENSGALG00000007564 462 0.934 - - - - - - - 0.934 - - UPF0061 protein xcc-b100_1894-like
76. PRKAG2 ENSGALG00000006219 504 0.933 - - - - - - - 0.933 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
77. PDCD7 ENSGALG00000021027 3807 0.933 - - - - - - - 0.933 - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
78. ENSGALG00000016701 ENSGALG00000016701 418 0.933 - - - - - - - 0.933 - -
79. gga-mir-6681 ENSGALG00000027840 546 0.933 - - - - - - - 0.933 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
80. SLC35F6 ENSGALG00000016589 5172 0.932 - - - - - - - 0.932 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
81. PDHX ENSGALG00000033753 2799 0.932 - - - - - - - 0.932 - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
82. CLEC3B ENSGALG00000030969 363 0.931 - - - - - - - 0.931 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
83. ENSGALG00000021835 ENSGALG00000021835 424 0.93 - - - - - - - 0.930 - -
84. RFX3 ENSGALG00000010179 305 0.929 - - - - - - - 0.929 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
85. ZNF148 ENSGALG00000012049 365 0.929 - - - - - - - 0.929 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
86. ENSGALG00000025773 ENSGALG00000025773 977 0.929 - - - - - - - 0.929 - -
87. AGO1 ENSGALG00000002249 125 0.929 - - - - - - - 0.929 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
88. FRYL ENSGALG00000014103 314 0.929 - - - - - - - 0.929 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
89. IDS ENSGALG00000009154 1177 0.929 - - - - - - - 0.929 - - iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
90. SZT2 ENSGALG00000028561 255 0.928 - - - - - - - 0.928 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
91. CHGA ENSGALG00000010820 1028 0.928 - - - - - - - 0.928 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
92. YY1 ENSGALG00000017388 1933 0.928 - - - - - - - 0.928 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
93. HABP4 ENSGALG00000012628 2894 0.926 - - - - - - - 0.926 - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
94. MOB2 ENSGALG00000030499 3658 0.922 - - - - - - - 0.922 - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
95. CYB5R3 ENSGALG00000014122 7664 0.921 - - - - - - - 0.921 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
96. SCARF1 2103 0.908 - - - - - - - 0.908 - - scavenger receptor class F member 1, transcript variant X2
97. TLCD1 ENSGALG00000003973 17569 0.907 - - - - - - - 0.907 - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
98. DHDDS ENSGALG00000029909 2229 0.906 - - - - - - 0.906 - - - dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:20603]
99. POLDIP3 ENSGALG00000011863 6424 0.903 - - - - - - - 0.903 - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
100. MRTO4 ENSGALG00000003991 13642 0.903 - - - - - - - 0.903 - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]

There are 504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA