Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NIPAL3

Gene Name Gene ID Reads Annotation
NIPAL3 ENSGALG00000004268 37 NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]











Genes with expression patterns similar to NIPAL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NIPAL3 ENSGALG00000004268 37 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
2. LOC396365 ENSGALG00000027219 7 1.699 - - - - - 0.968 - 0.731 - - preprogastrin
3. GHR ENSGALG00000014855 131 1.69 - - - - - 0.961 0.729 - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
4. SMIM14 ENSGALG00000014321 166 1.456 - - 0.720 - - - 0.736 - - - small integral membrane protein 14 [Source:NCBI gene;Acc:422793]
5. ENSGALG00000010218 ENSGALG00000010218 12 0.984 - - - - - 0.984 - - - -
6. IL1RAP ENSGALG00000007253 6 0.984 - - - - - 0.984 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
7. CCNJL ENSGALG00000040152 4 0.969 - - - - - 0.969 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
8. REM1 ENSGALG00000045602 4 0.968 - - - - - 0.968 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
9. LCT ENSGALG00000012260 21 0.968 - - - - - 0.968 - - - - lactase [Source:NCBI gene;Acc:424294]
10. IKBIP ENSGALG00000026284 31 0.968 - - - - - 0.968 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
11. TRPV6 ENSGALG00000014746 3 0.968 - - - - - 0.968 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
12. ASB15 ENSGALG00000008814 7 0.968 - - - - - 0.968 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
13. C15orf60 C15orf60 16 0.968 - - - - - 0.968 - - - -
14. CPSF4L ENSGALG00000004441 4 0.968 - - - - - 0.968 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
15. SLC51A ENSGALG00000007478 6 0.968 - - - - - 0.968 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
16. HSD11B1b ENSGALG00000001369 1 0.968 - - - - - 0.968 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
17. ENSGALG00000016499 ENSGALG00000016499 4 0.968 - - - - - 0.968 - - - -
18. TMEM56 ENSGALG00000005580 10 0.968 - - - - - 0.968 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
19. C1QTNF4 ENSGALG00000008080 3 0.968 - - - - - 0.968 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
20. CHRNB3 ENSGALG00000015384 9 0.968 - - - - - 0.968 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
21. ENSGALG00000008309 ENSGALG00000008309 7 0.968 - - - - - 0.968 - - - -
22. MRAP2 ENSGALG00000015838 7 0.968 - - - - - 0.968 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
23. ENSGALG00000027143 ENSGALG00000027143 23 0.965 - - - - - 0.965 - - - -
24. TGIF2 ENSGALG00000024081 21 0.963 - - - - - 0.963 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
25. LUZP2 ENSGALG00000030151 585 0.958 - - - - - 0.958 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
26. PPARG ENSGALG00000004974 62 0.956 - - - - - 0.956 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
27. TOM1L2 ENSGALG00000004902 89 0.956 - - - - 0.956 - - - - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
28. C14orf159 C14orf159 7 0.953 - - - - - 0.953 - - - -
29. SGK196 SGK196 83 0.949 - - - - - 0.949 - - - -
30. CD200R1A CD200R1A 105 0.943 - - - - - 0.943 - - - -
31. HRH3 ENSGALG00000005170 5 0.94 - - - - 0.940 - - - - - histamine receptor H3 [Source:HGNC Symbol;Acc:HGNC:5184]
32. SNORA23 SNORA23 5 0.94 - - - - 0.940 - - - - -
33. UBAP1L ENSGALG00000007333 39 0.939 - - - - 0.939 - - - - - ubiquitin associated protein 1 like [Source:NCBI gene;Acc:769261]
34. FIBCD1 ENSGALG00000003866 2 0.936 - - - - - 0.936 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
35. C20orf96 C20orf96 10 0.931 - - - - - 0.931 - - - -
36. ETAA1 ENSGALG00000027922 1684 0.929 - - - - - 0.929 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
37. HIAT1 HIAT1 447 0.92 - - - - 0.920 - - - - -
38. RUNX3 ENSGALG00000043372 43 0.914 - - - - - 0.914 - - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
39. PSMD4 ENSGALG00000028505 16 0.913 - - - - - 0.913 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
40. SCARB1 ENSGALG00000046226 428 0.908 - - - - - 0.908 - - - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
41. FAM149B1 ENSGALG00000002693 16 0.905 - - - - 0.905 - - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
42. CHIC2 ENSGALG00000013931 21 0.904 - - - - - 0.904 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
43. CASP7 ENSGALG00000008933 506 0.903 - - - - - 0.903 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
44. SUFU ENSGALG00000008096 307 0.902 - - - - - 0.902 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
45. CDK5RAP3 ENSGALG00000036452 693 0.902 - - - - - - 0.902 - - - CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]
46. MAP3K8 ENSGALG00000007356 188 0.898 - - - - - 0.898 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
47. ENSGALG00000001478 ENSGALG00000001478 23 0.897 - - - - 0.897 - - - - -
48. UBE2E1 ENSGALG00000011286 5483 0.893 - - - - - 0.893 - - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
49. NOTUM ENSGALG00000002900 55 0.891 - - - - 0.891 - - - - - notum, palmitoleoyl-protein carboxylesterase [Source:HGNC Symbol;Acc:HGNC:27106]
50. C15orf26 C15orf26 21 0.89 - - - - - 0.890 - - - -
51. F8 ENSGALG00000005077 56 0.89 - - - - - 0.890 - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
52. SRD5A2 ENSGALG00000010625 23 0.889 - - - - - 0.889 - - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
53. FASTKD1 ENSGALG00000009841 45 0.888 - - - - - 0.888 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
54. FAM65C 36 0.883 - - - - - 0.883 - - - - family with sequence similarity 65 member C, transcript variant X29
55. S100A9 ENSGALG00000024272 103 0.882 - - - - - 0.882 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
56. ARF1 ENSGALG00000005393 364 0.881 - - - - - 0.881 - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
57. PAFAH2 ENSGALG00000021658 68 0.881 - - - - 0.881 - - - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
58. PCDH7 ENSGALG00000033883 6 0.879 - - - - - 0.879 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
59. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.871 - - - - - 0.871 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
60. PRKDC ENSGALG00000042469 449 0.87 - - - - 0.870 - - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
61. CYBA ENSGALG00000029367 125 0.868 - - - - 0.868 - - - - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
62. CACNA2D3 ENSGALG00000005400 66 0.867 - - - - - 0.867 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:HGNC Symbol;Acc:HGNC:15460]
63. RFX3 ENSGALG00000010179 305 0.86 - - - - - 0.860 - - - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
64. TDRD1 ENSGALG00000046180 612 0.86 - - - - - 0.860 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
65. THAP1 ENSGALG00000015385 15 0.859 - - - - - 0.859 - - - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
66. GALK2 ENSGALG00000036201 1016 0.853 - - - - - 0.853 - - - - galactokinase 2 [Source:NCBI gene;Acc:415596]
67. AP4S1 ENSGALG00000009936 55 0.849 - - - - 0.849 - - - - - adaptor related protein complex 4 subunit sigma 1 [Source:HGNC Symbol;Acc:HGNC:575]
68. KLHL22 ENSGALG00000006422 132 0.849 - - - - - 0.849 - - - - kelch like family member 22, transcript variant X2
69. CA8 ENSGALG00000039145 109 0.846 - - - - - 0.846 - - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
70. WAPAL WAPAL 625 0.843 - - - - 0.843 - - - - -
71. FER ENSGALG00000000273 80 0.843 - - - - - 0.843 - - - - FER tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3655]
72. FGF22 ENSGALG00000041822 37 0.84 - - - - - 0.840 - - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
73. MAPK1 ENSGALG00000001501 34 0.84 - - - - - 0.840 - - - - mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
74. ITGA2 ENSGALG00000014903 31 0.839 - - - - - - - - - 0.839 integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]
75. SHB ENSGALG00000026811 1194 0.837 - - - - - 0.837 - - - - SH2 domain containing adaptor protein B
76. EPYC ENSGALG00000011269 17 0.835 - - - - - - 0.835 - - - epiphycan [Source:NCBI gene;Acc:417890]
77. CD109 ENSGALG00000015910 11 0.835 - - - - - - 0.835 - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
78. TMEM72 ENSGALG00000026808 5 0.835 - - - - - - 0.835 - - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
79. VCAM1 ENSGALG00000005257 102 0.835 - - - - - - 0.835 - - - vascular cell adhesion molecule 1, transcript variant X1
80. TMEM181 ENSGALG00000013737 19 0.835 - - - - - - 0.835 - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
81. PALB2 ENSGALG00000006078 1549 0.835 - - - - - - 0.835 - - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
82. LRRC1 ENSGALG00000016304 21 0.835 - - - - - - 0.835 - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
83. GNG4 ENSGALG00000010986 23 0.835 - - - - - - 0.835 - - - G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
84. RCBTB2 ENSGALG00000017000 3 0.835 - - - - - - 0.835 - - - RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]
85. FGL2 ENSGALG00000008306 15 0.835 - - - - - - 0.835 - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
86. FAM196A 5 0.835 - - - - - - 0.835 - - - family with sequence similarity 196 member A, transcript variant X6
87. DSE ENSGALG00000014963 70 0.835 - - - - - - 0.835 - - - dermatan sulfate epimerase, transcript variant X1
88. PRKAA2 ENSGALG00000010826 2 0.835 - - - - - - 0.835 - - - protein kinase AMP-activated catalytic subunit alpha 2 [Source:NCBI gene;Acc:429110]
89. DNAH5 ENSGALG00000012997 28 0.835 - - - - - - 0.835 - - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
90. GPR85 ENSGALG00000009439 23 0.835 - - - - - - 0.835 - - - G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
91. C11ORF61 C11ORF61 41 0.835 - - - - - - 0.835 - - -
92. PINLYP ENSGALG00000026884 23 0.835 - - - - - - 0.835 - - - phospholipase A2 inhibitor and LY6/PLAUR domain containing
93. ENSGALG00000009151 ENSGALG00000009151 6 0.835 - - - - - - 0.835 - - -
94. CCND2 ENSGALG00000017283 38 0.835 - - - - - - 0.835 - - - cyclin D2 [Source:NCBI gene;Acc:374047]
95. A4GNT ENSGALG00000006600 11 0.835 - - - - - - 0.835 - - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
96. TEKT5 ENSGALG00000007257 5 0.835 - - - - - - 0.835 - - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
97. PLA2G10L ENSGALG00000019233 11 0.832 - - - - - 0.832 - - - - phospholipase A2 group X-like, transcript variant X2
98. CYP27A1 ENSGALG00000002470 321 0.831 - - - - 0.831 - - - - - cytochrome P450 family 27 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2605]
99. C3H20ORF94 C3H20ORF94 414 0.83 - - - - - 0.830 - - - -
100. BDH2 ENSGALG00000012338 2446 0.829 - - - - - 0.829 - - - - 3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]

There are 125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA