Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NIF3L1

Gene Name Gene ID Reads Annotation
NIF3L1 ENSGALG00000008226 1500 NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]











Genes with expression patterns similar to NIF3L1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NIF3L1 ENSGALG00000008226 1500 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
2. DNAJB14 ENSGALG00000014026 598 0.917 - - - - - - - - 0.917 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
3. NCOA2 ENSGALG00000036017 256 0.914 - - - - - - - - 0.914 - nuclear receptor coactivator 2, transcript variant X9
4. KIAA0232 ENSGALG00000015538 717 0.912 - - - - - - - - 0.912 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
5. RBMS1 ENSGALG00000011132 569 0.912 - - - - - - - - 0.912 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
6. MYO3A ENSGALG00000007647 643 0.903 - - - - - - - - 0.903 - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
7. FMR1 ENSGALG00000009177 561 0.902 - - - - - - - - 0.902 - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
8. SETX ENSGALG00000003661 701 0.897 - - - - - - - - 0.897 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
9. BPHL ENSGALG00000029659 501 0.895 - - - - - - - - 0.895 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
10. VPS51 ENSGALG00000004166 204 0.894 - - - - - - - - 0.894 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
11. RNF152 ENSGALG00000028822 291 0.892 - - - - - - - - 0.892 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
12. AIDA ENSGALG00000009426 219 0.891 - - - - - - - - 0.891 - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
13. ENOX2 ENSGALG00000004079 4055 0.889 - - - - - - - - 0.889 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
14. RNF207 2949 0.886 - - - - - - - - 0.886 - ring finger protein 207, transcript variant X1
15. SRRD ENSGALG00000005614 234 0.883 - - - - - - - - 0.883 - SRR1 domain containing [Source:NCBI gene;Acc:416908]
16. IFT27 ENSGALG00000042990 221 0.88 - - - - - - - - 0.880 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
17. RIF1 ENSGALG00000012484 2248 0.88 - - - - - - - - 0.880 - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
18. SNRK ENSGALG00000039920 174 0.879 - - - - - - - - 0.879 - SNF related kinase [Source:NCBI gene;Acc:420675]
19. GALNT14 ENSGALG00000009078 126 0.878 - - - - - - - - 0.878 - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
20. FGF12 ENSGALG00000036971 2631 0.878 - - - - - - - - 0.878 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
21. HAND1 ENSGALG00000035104 2351 0.875 - - - - - - - - 0.875 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
22. CBX1 ENSGALG00000033926 2436 0.871 - - - - - - - - 0.871 - chromobox 1 [Source:NCBI gene;Acc:374237]
23. VIPAS39 ENSGALG00000010459 2090 0.863 - - - - - - - - 0.863 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
24. ANKIB1 ENSGALG00000031917 109 0.862 - - - - - - - - 0.862 - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]
25. HDX ENSGALG00000007041 179 0.861 - - - - - - - - 0.861 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
26. IRF2 ENSGALG00000010642 923 0.857 - - - - - - - - 0.857 - interferon regulatory factor 2 [Source:NCBI gene;Acc:396115]
27. SFMBT2 ENSGALG00000009279 125 0.856 - - - - - - - - 0.856 - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
28. HMGXB3 ENSGALG00000005770 119 0.855 - - - - - - - - 0.855 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
29. G6PC2 ENSGALG00000010899 260 0.854 - - - - - - - - 0.854 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
30. IFT81 ENSGALG00000003854 2534 0.85 - - - - - - - - 0.850 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
31. ADNP ENSGALG00000007989 1930 0.848 - - - - - - - - 0.848 - activity dependent neuroprotector homeobox [Source:HGNC Symbol;Acc:HGNC:15766]
32. SDR42E1 ENSGALG00000005456 586 0.848 - - - - - - - - 0.848 - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
33. ENSGALG00000021611 ENSGALG00000021611 1551 0.846 - - - - - - - - 0.846 -
34. NEIL1 ENSGALG00000001586 2292 0.843 - - - - - - - - 0.843 - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
35. ELN 765 0.842 - - - - - - - - 0.842 - elastin, transcript variant X24
36. GAPVD1 ENSGALG00000000993 1988 0.839 - - - - - - - - 0.839 - GTPase activating protein and VPS9 domains 1 [Source:NCBI gene;Acc:417095]
37. FTSJ2 FTSJ2 2951 0.838 - - - - - - - - 0.838 -
38. BFAR ENSGALG00000003111 1778 0.838 - - - - - - - - 0.838 - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
39. GSTCD ENSGALG00000010573 1409 0.838 - - - - - - - - 0.838 - glutathione S-transferase C-terminal domain containing [Source:HGNC Symbol;Acc:HGNC:25806]
40. ITM2B ENSGALG00000016996 1112 0.837 - - - - - - - - 0.837 - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
41. FZD6 ENSGALG00000030626 3336 0.837 - - - - - - - - 0.837 - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
42. IARS ENSGALG00000004813 12936 0.837 - - - - - - - - 0.837 - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
43. MT-ND4L MT-ND4L 12537 0.834 - - - - - - - - 0.834 -
44. HKDC1 ENSGALG00000021039 134 0.833 - - - - - - - - 0.833 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
45. RBM45 ENSGALG00000009202 6057 0.832 - - - - - - - - 0.832 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
46. ELP3 ENSGALG00000016624 4483 0.831 - - - - - - - - 0.831 - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
47. PAN3 ENSGALG00000017092 5387 0.831 - - - - - - - - 0.831 - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
48. ANO1 ENSGALG00000041808 5149 0.831 - - - - - - - - 0.831 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
49. FILIP1L ENSGALG00000015271 644 0.831 - - - - - - - - 0.831 - filamin A interacting protein 1 like, transcript variant X8
50. ERO1LB ERO1LB 2910 0.83 - - - - - - - - 0.830 -
51. MAP4 36 0.829 - - - - - - - - 0.829 - microtubule associated protein 4, transcript variant X12
52. SKIL ENSGALG00000009356 335 0.828 - - - - - - - - 0.828 - SKI like proto-oncogene [Source:NCBI gene;Acc:396087]
53. RAP1A ENSGALG00000001476 5287 0.824 - - - - - - - - 0.824 - RAP1A, member of RAS oncogene family
54. APP ENSGALG00000015770 9438 0.82 - - - - - - - - 0.820 - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
55. KIAA0408 ENSGALG00000030211 934 0.818 - - - - - - - - 0.818 - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
56. UBXN2A ENSGALG00000016497 2444 0.815 - - - - - - - - 0.815 - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
57. PHTF2 ENSGALG00000008335 722 0.815 - - - - - - - - 0.815 - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
58. ENSGALG00000016701 ENSGALG00000016701 418 0.814 - - - - - - - - 0.814 -
59. TFG ENSGALG00000015299 849 0.813 - - - - - - - - 0.813 - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
60. CWC22 ENSGALG00000009001 5984 0.813 - - - - - - - - 0.813 - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
61. SGCE ENSGALG00000009670 3070 0.813 - - - - - - - - 0.813 - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
62. ALDH5A1 ENSGALG00000032544 4924 0.812 - - - - - - - - 0.812 - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
63. DUSP10 ENSGALG00000009450 1041 0.812 - - - - - - - - 0.812 - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
64. TADA2A ENSGALG00000005452 2706 0.81 - - - - - - - - 0.810 - transcriptional adaptor 2A [Source:NCBI gene;Acc:417656]
65. ADAM9 ENSGALG00000003398 1299 0.81 - - - - - - - - 0.810 - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
66. CSPP1 1756 0.81 - - - - - - - - 0.810 - centrosome and spindle pole associated protein 1
67. MYC ENSGALG00000033631 16949 0.81 - - - - - - - - 0.810 - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
68. RYBP ENSGALG00000033025 3019 0.808 - - - - - - - - 0.808 - RING1 and YY1 binding protein
69. C14orf79 C14orf79 401 0.807 - - - - - - - - 0.807 -
70. ZNF148 ENSGALG00000012049 365 0.806 - - - - - - - - 0.806 - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
71. GPR180 ENSGALG00000016897 1545 0.805 - - - - - - - - 0.805 - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
72. OSBPL11 ENSGALG00000012059 2523 0.801 - - - - - - - - 0.801 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
73. PRDM4 ENSGALG00000012619 876 0.801 - - - - - - - - 0.801 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
74. ENSGALG00000024348 ENSGALG00000024348 254 0.8 - - - - - - - - 0.800 -
75. MAPK8IP3 ENSGALG00000029514 57 0.799 - - - - - - - - 0.799 - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
76. MED13 ENSGALG00000005230 1504 0.799 - - - - - - - - 0.799 - mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
77. LIMS1 ENSGALG00000029970 7244 0.799 - - - - - - - - 0.799 - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
78. TCP11L2 ENSGALG00000012658 1671 0.797 - - - - - - - - 0.797 - t-complex 11 like 2 [Source:NCBI gene;Acc:425052]
79. AP1AR ENSGALG00000028807 2398 0.796 - - - - - - - - 0.796 - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
80. EXOC8 ENSGALG00000043280 3596 0.796 - - - - - - - - 0.796 - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
81. CUL1 ENSGALG00000036941 317 0.794 - - - - - - - - 0.794 - cullin 1 [Source:HGNC Symbol;Acc:HGNC:2551]
82. LACE1 LACE1 74 0.794 - - - - - - - - 0.794 -
83. ASH1L ENSGALG00000014638 803 0.793 - - - - - - - - 0.793 - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
84. RABL2B ENSGALG00000032458 678 0.792 - - - - - - - - 0.792 - RAB, member of RAS oncogene family like 2B [Source:NCBI gene;Acc:426865]
85. ZMYM2 ENSGALG00000017139 3747 0.791 - - - - - - - - 0.791 - zinc finger MYM-type containing 2, transcript variant X10
86. GIP ENSGALG00000001299 295 0.79 - - - - - - - - 0.790 - gastric inhibitory polypeptide [Source:NCBI gene;Acc:419989]
87. FAM161B ENSGALG00000010196 672 0.786 - - - - - - - - 0.786 - FAM161B, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:19854]
88. C10orf11 C10orf11 3087 0.785 - - - - - - - - 0.785 -
89. ELMO3 ENSGALG00000030220 375 0.785 - - - - - - - - 0.785 - engulfment and cell motility 3 [Source:NCBI gene;Acc:100857533]
90. SNX3 ENSGALG00000015304 1631 0.784 - - - - - - - - 0.784 - sorting nexin 3 [Source:NCBI gene;Acc:421772]
91. LPCAT2 ENSGALG00000003574 893 0.784 - - - - - - - - 0.784 - lysophosphatidylcholine acyltransferase 2 [Source:NCBI gene;Acc:415716]
92. VPS45 ENSGALG00000013899 154 0.782 - - - - - - - - 0.782 - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
93. OGDH ENSGALG00000014155 441 0.781 - - - - - - - - 0.781 - oxoglutarate dehydrogenase [Source:NCBI gene;Acc:426429]
94. PTPRU ENSGALG00000031440 1357 0.78 - - - - - - - - 0.780 - protein tyrosine phosphatase, receptor type U [Source:NCBI gene;Acc:395153]
95. SPECC1 ENSGALG00000004400 611 0.78 - - - - - - - - 0.780 - sperm antigen with calponin homology and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:30615]
96. CDC123 ENSGALG00000014038 1418 0.779 - - - - - - - - 0.779 - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
97. TH1L TH1L 1358 0.779 - - - - - - - - 0.779 -
98. SSBP1 ENSGALG00000012876 34256 0.779 - - - - - - - - 0.779 - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
99. HP1BP3 ENSGALG00000010079 33723 0.779 - - - - - - - - 0.779 - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
100. CLN6 ENSGALG00000007981 5656 0.778 - - - - - - - - 0.778 - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]

There are 88 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA