Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NID1

Gene Name Gene ID Reads Annotation
NID1 ENSGALG00000042079 89 nidogen 1 [Source:HGNC Symbol;Acc:HGNC:7821]











Genes with expression patterns similar to NID1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NID1 ENSGALG00000042079 89 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nidogen 1 [Source:HGNC Symbol;Acc:HGNC:7821]
2. CLIC3 ENSGALG00000038789 233 1.527 - - - - - - - 0.825 - 0.702 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
3. ENSGALG00000013318 ENSGALG00000013318 8 1 - - - - - - 1.000 - - -
4. RGNL ENSGALG00000016722 3 1 - - - - - - 1.000 - - - regucalcin-like, transcript variant X4
5. AHR2 ENSGALG00000023742 21 1 - - - - - - 1.000 - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
6. RAB3GAP2 ENSGALG00000009503 36 1 - - - - - - 1.000 - - - RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
7. UPK3A ENSGALG00000014227 7 1 - - - - - - 1.000 - - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
8. U2 U2 89 1 - - - - - - 1.000 - - -
9. FGG ENSGALG00000009268 418 1 - - - - - - 1.000 - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
10. ADAMTSL2 ENSGALG00000002955 5 1 - - - - - - 1.000 - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
11. EZH1 ENSGALG00000003068 30 0.966 - - - - - - 0.966 - - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3526]
12. SLC20A1 ENSGALG00000013740 40 0.965 - - - - - - 0.965 - - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
13. PRSS12 ENSGALG00000012004 53 0.946 - - - - - - 0.946 - - - serine protease 12 [Source:HGNC Symbol;Acc:HGNC:9477]
14. KIAA1024L ENSGALG00000027692 20 0.946 - - - - - - 0.946 - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
15. DLG2 56 0.933 - - - - - - 0.933 - - - discs large MAGUK scaffold protein 2, transcript variant X24
16. ENSGALG00000020700 ENSGALG00000020700 44 0.93 - - - - - - 0.930 - - -
17. DAW1 ENSGALG00000002992 112 0.927 - - - - - - 0.927 - - - dynein assembly factor with WD repeats 1 [Source:HGNC Symbol;Acc:HGNC:26383]
18. PCDH15 ENSGALG00000002744 34 0.898 - - - - - - 0.898 - - - protocadherin related 15 [Source:NCBI gene;Acc:423644]
19. GUCA1A ENSGALG00000001431 6 0.893 - - - - - - 0.893 - - - guanylate cyclase activator 1A [Source:NCBI gene;Acc:374216]
20. CD200L ENSGALG00000015395 14 0.893 - - - - - - 0.893 - - - CD200 molecule-like [Source:NCBI gene;Acc:418424]
21. STXBP4 ENSGALG00000003033 59 0.886 - - - - - - 0.886 - - - syntaxin binding protein 4 [Source:HGNC Symbol;Acc:HGNC:19694]
22. ATP2C1 ENSGALG00000034340 32 0.877 - - - - - - 0.877 - - - ATPase secretory pathway Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:13211]
23. LRCH1 ENSGALG00000016990 17 0.868 - - - - - - 0.868 - - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
24. ENTHD2 684 0.863 - - - - - - 0.863 - - - ENTH domain containing 2, transcript variant X1
25. RFLB RFLB 140 0.862 - - - - - - 0.862 - - -
26. HTR7_1 ENSGALG00000040549 86 0.86 - - - - - - 0.860 - - - 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
27. CPGC CPGC 33 0.856 - - - - - - 0.856 - - -
28. LOC416622 ENSGALG00000007030 30 0.855 - - - - - - - 0.855 - - transmembrane protein 180-like, transcript variant X8
29. SMCR8 ENSGALG00000024082 44 0.855 - - - - - - 0.855 - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
30. MEI1 ENSGALG00000031186 61 0.852 - - - - - - - 0.852 - - meiotic double-stranded break formation protein 1 [Source:HGNC Symbol;Acc:HGNC:28613]
31. CHRNA7 ENSGALG00000004096 107 0.85 - - - - - - 0.850 - - - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
32. ENSGALG00000027927 ENSGALG00000027927 654 0.847 - - - - - - - - - 0.847
33. AGMO ENSGALG00000010792 76 0.846 - - - - - - 0.846 - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
34. GRIK2 ENSGALG00000015434 5 0.844 - - - - - - - 0.844 - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
35. ENSGALG00000026897 ENSGALG00000026897 6 0.844 - - - - - - - 0.844 - -
36. RIN3 ENSGALG00000010806 729 0.842 - - - - - - 0.842 - - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
37. GLP2R ENSGALG00000041800 10 0.83 - - - - - - - 0.830 - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
38. RBM46 ENSGALG00000009278 98 0.826 - - - - - - 0.826 - - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
39. SULT2B1L1 ENSGALG00000023472 569 0.826 - - - - - - - 0.826 - - sulfotransferase family cytosolic 2B member 1-like 1
40. TCF20 ENSGALG00000011878 69 0.826 - - - - - - 0.826 - - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
41. UNC5A ENSGALG00000018998 113 0.818 - - - - - - 0.818 - - - unc-5 netrin receptor A [Source:HGNC Symbol;Acc:HGNC:12567]
42. SLC12A8 ENSGALG00000012045 39 0.815 - - - - - - 0.815 - - - solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
43. RNF215 ENSGALG00000040925 19 0.813 - - - - - - - - - 0.813 ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
44. NAALADL2 ENSGALG00000023670 39 0.813 - - - - - - - - - 0.813 N-acetylated alpha-linked acidic dipeptidase like 2 [Source:HGNC Symbol;Acc:HGNC:23219]
45. ENSGALG00000011906 ENSGALG00000011906 181 0.808 - - - - - - 0.808 - - -
46. uc_6 uc_6 14 0.807 - - - - - 0.807 - - - -
47. TTLL12 ENSGALG00000014167 714 0.806 - - - - - - - 0.806 - - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
48. PARD3 ENSGALG00000007125 687 0.802 - - - - - - - - - 0.802 par-3 family cell polarity regulator [Source:NCBI gene;Acc:420468]
49. WFS1 ENSGALG00000015529 58 0.799 - - - - - - - 0.799 - - wolframin ER transmembrane glycoprotein [Source:HGNC Symbol;Acc:HGNC:12762]
50. SCD ENSGALG00000005739 161 0.798 - - - - - - 0.798 - - - stearoyl-CoA desaturase [Source:NCBI gene;Acc:395706]
51. DLG1 ENSGALG00000006908 117 0.797 - - - - - - 0.797 - - - discs large MAGUK scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:2900]
52. DRD4 ENSGALG00000040761 79 0.793 - - - - - - 0.793 - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
53. LRIF1 ENSGALG00000000106 256 0.792 - - - - - - 0.792 - - - ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:HGNC:30299]
54. CEP57L1 ENSGALG00000015283 22 0.791 - - - 0.791 - - - - - - centrosomal protein 57 like 1 [Source:HGNC Symbol;Acc:HGNC:21561]
55. IL2RB ENSGALG00000012472 7 0.791 - - - - - 0.791 - - - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
56. MAB21L2 4841 0.79 - - - - - - - - - 0.790 mab-21-like 2 (C. elegans)
57. PRTFDC1 ENSGALG00000007694 111 0.787 - - - - - - 0.787 - - - phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
58. Mar-02 Mar-02 7 0.786 - - - - - 0.786 - - - -
59. EIF4H ENSGALG00000001313 59 0.78 - - - - - - - - - 0.780 eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
60. SK2 SK2 74 0.779 - - - - - - 0.779 - - -
61. CD9 ENSGALG00000017274 960 0.779 - - - - - - - - 0.779 - CD9 molecule [Source:NCBI gene;Acc:395527]
62. NRROS 72 0.777 - - - - - - 0.777 - - - negative regulator of reactive oxygen species, transcript variant X2
63. ARHGAP6 ENSGALG00000016602 1098 0.769 - - - - - 0.769 - - - - Rho GTPase activating protein 6 [Source:HGNC Symbol;Acc:HGNC:676]
64. SH2D4A ENSGALG00000010122 206 0.769 - - - - - - - - 0.769 - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
65. ACAN ENSGALG00000006725 184 0.761 - - - - 0.761 - - - - - aggrecan [Source:NCBI gene;Acc:395798]
66. MRM1 ENSGALG00000039523 2009 0.758 - - - - - - - - - 0.758 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
67. C9orf91 C9orf91 629 0.756 - - - - - 0.756 - - - -
68. TTLL1 ENSGALG00000014163 182 0.756 - - - - - - - 0.756 - - tubulin tyrosine ligase like 1 [Source:HGNC Symbol;Acc:HGNC:1312]
69. ARL8A ENSGALG00000000606 26 0.755 - - - - - - - 0.755 - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
70. PLA2G10 ENSGALG00000021314 53 0.755 - - - - - - 0.755 - - - phospholipase A2 group X [Source:NCBI gene;Acc:416425]
71. GOSR2 ENSGALG00000001107 322 0.752 - - - - - - - - - 0.752 golgi SNAP receptor complex member 2 [Source:NCBI gene;Acc:419973]
72. FLRT2 ENSGALG00000010589 490 0.75 - - - - - - - - - 0.750 fibronectin leucine rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3761]
73. RAB31 ENSGALG00000022874 418 0.75 - - - - - - - - 0.750 - RAB31, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9771]
74. ENSGALG00000011246 ENSGALG00000011246 1308 0.749 - - - - - - 0.749 - - -
75. C16orf72 ENSGALG00000007291 228 0.749 - - - - - 0.749 - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
76. TOLLIP ENSGALG00000006697 917 0.749 - - - - - - - - 0.749 - toll interacting protein [Source:NCBI gene;Acc:423099]
77. SMYD2 ENSGALG00000009788 225 0.748 - - - - - - - - - 0.748 SET and MYND domain containing 2 [Source:NCBI gene;Acc:421361]
78. KIAA1919 KIAA1919 58 0.747 - - - - - 0.747 - - - -
79. MATR3 ENSGALG00000002478 12793 0.744 - - - - - - - - - 0.744 matrin 3 [Source:NCBI gene;Acc:373948]
80. DPP10 ENSGALG00000012156 20 0.743 - - - - - 0.743 - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
81. PVALB1 PVALB1 267 0.743 - - - - - 0.743 - - - -
82. LY96 ENSGALG00000032701 18 0.743 - - - - - 0.743 - - - - lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
83. AGO1 ENSGALG00000002249 125 0.743 - - - - - 0.743 - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
84. PPM1L ENSGALG00000009537 5 0.743 - - - - - 0.743 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
85. ENSGALG00000023485 ENSGALG00000023485 46 0.743 - - - - - 0.743 - - - -
86. FAM208B 24 0.743 - - - - - 0.743 - - - - family with sequence similarity 208 member B, transcript variant X3
87. PPIP5K1 ENSGALG00000008385 7 0.743 - - - - - 0.743 - - - - diphosphoinositol pentakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:29023]
88. ALDH6A1 ENSGALG00000010211 29 0.743 - - - - - 0.743 - - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
89. ATP6V1AL ENSGALG00000000048 21 0.743 - - - - - 0.743 - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
90. KCNB1 ENSGALG00000004758 620 0.738 - - - - - - - - - 0.738 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
91. FGFR4 ENSGALG00000028543 1228 0.737 - - - - - - - - - 0.737 fibroblast growth factor receptor 4 [Source:HGNC Symbol;Acc:HGNC:3691]
92. FBXO18 35 0.737 - - - - - - 0.737 - - - F-box protein, helicase, 18, transcript variant X4
93. TEKT5 ENSGALG00000007257 5 0.736 - - - - - - - 0.736 - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
94. HAAO ENSGALG00000009926 6 0.736 - - - - - - - 0.736 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
95. ABI3BP ENSGALG00000015307 4 0.736 - - - - - - - 0.736 - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
96. TMEM207 ENSGALG00000026953 7 0.736 - - - - - - - 0.736 - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
97. HBEGF ENSGALG00000000949 15 0.736 - - - - - - - 0.736 - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
98. FABP1 ENSGALG00000015937 12 0.736 - - - - - - - 0.736 - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
99. RS1 ENSGALG00000016523 11 0.736 - - - - - - - 0.736 - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
100. MMP9 ENSGALG00000006992 78 0.736 - - - - - - - 0.736 - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]

There are 110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA