Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for NID1

Gene Name Gene ID Reads Annotation
NID1 NID1 6192










Genes with expression patterns similar to NID1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. NID1 NID1 6192 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 2.627 - - 0.912 - - 0.803 0.912 - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
3. arl4ca ENSDARG00000057606 4686 2.51 - - - - - - 0.867 0.879 0.764 ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
4. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 2.504 0.746 0.953 - - - - 0.805 - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
5. fndc3ba ENSDARG00000078179 2753 1.867 - 0.952 0.915 - - - - - - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
6. TIFA TIFA 1519 1.865 - 0.944 0.921 - - - - - -
7. mapk12a ENSDARG00000042021 1573 1.854 - 0.943 0.911 - - - - - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
8. tiprl ENSDARG00000032353 1045 1.848 - 0.936 0.912 - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
9. CABZ01103862.1 ENSDARG00000109235 3223 1.837 - 0.922 0.915 - - - - - -
10. epn2 ENSDARG00000008377 5458 1.823 - 0.935 0.888 - - - - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
11. helz ENSDARG00000030560 3259 1.775 - 0.941 - - - 0.834 - - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
12. pdap1b ENSDARG00000002967 2159 1.771 - 0.944 0.827 - - - - - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
13. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.764 0.811 0.953 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
14. znf385a ENSDARG00000009899 3433 1.757 - 0.935 - - - - 0.822 - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
15. AL929434.1 AL929434.1 3294 1.749 - 0.934 0.815 - - - - - -
16. cd9b ENSDARG00000016691 15573 1.747 - - 0.853 - - - 0.894 - - CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
17. aldh2.1 ENSDARG00000089924 2883 1.732 - 0.951 - - - - 0.781 - - aldehyde dehydrogenase 2 family member, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1262]
18. clint1a ENSDARG00000025535 4965 1.727 - 0.868 0.859 - - - - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
19. gng5 ENSDARG00000039830 12102 1.714 - 0.892 - - - 0.822 - - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
20. arpc4l ENSDARG00000058225 10107 1.711 - - 0.794 - - - 0.917 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
21. ppp3r1a ENSDARG00000092659 9729 1.709 - 0.969 - - - - 0.740 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
22. txnipa ENSDARG00000036107 8863 1.698 - - 0.874 - - - 0.824 - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
23. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.692 - 0.962 - - - - 0.730 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
24. rap1b ENSDARG00000008867 7915 1.692 - 0.850 - - - - 0.842 - - RAP1B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9662]
25. lpp ENSDARG00000023578 3581 1.685 - - 0.870 - - - 0.815 - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
26. cdc14b ENSDARG00000021483 4958 1.683 - 0.948 - - - - 0.735 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
27. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 1.682 - 0.942 - - - 0.740 - - - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
28. ak2 ENSDARG00000005926 7598 1.679 - - 0.786 - - - 0.893 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
29. kdelr2a ENSDARG00000005254 13871 1.672 - - 0.924 - - - 0.748 - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
30. wls ENSDARG00000009534 8719 1.659 0.718 0.941 - - - - - - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
31. kif2c ENSDARG00000076228 2281 1.645 - - 0.921 - - - 0.724 - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
32. esf1 ENSDARG00000008740 1206 1.643 - - 0.905 0.738 - - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
33. lasp1 ENSDARG00000057867 18721 1.64 - - 0.898 - - - 0.742 - - LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
34. evpla ENSDARG00000019808 7565 1.639 - - - - - - 0.849 0.790 - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
35. MAL 9331 1.637 - - 0.891 - - - 0.746 - - mal, T-cell differentiation protein
36. mbtps2 ENSDARG00000057577 1285 1.63 - - 0.911 - - 0.719 - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
37. psmd7 ENSDARG00000102417 4732 1.627 - - 0.825 - - - 0.802 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
38. CABZ01074130.1 ENSDARG00000105274 26501 1.616 - - 0.913 - 0.703 - - - -
39. atp6v1e1b ENSDARG00000030694 5452 1.614 - 0.835 - - - - 0.779 - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
40. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.61 - - 0.844 - - 0.766 - - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
41. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 1.606 - - 0.888 0.718 - - - - - tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
42. cdk16_1 ENSDARG00000032072 2031 1.606 - - - - - 0.815 0.791 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
43. MFAP3L ENSDARG00000062752, ENSDARG00000115337 1373 1.602 - - - - - 0.744 0.858 - - microfibril associated protein 3 like [Source:ZFIN;Acc:ZDB-GENE-111229-2]
44. ptbp1a ENSDARG00000019362 6290 1.596 - - - - - 0.818 - 0.778 - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
45. clptm1l ENSDARG00000021048 1234 1.593 - - - - - 0.782 0.811 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
46. arid3b ENSDARG00000104034 16303 1.581 - 0.740 0.841 - - - - - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
47. zgc:165653 ENSDARG00000104713 1603 1.579 - - - - - 0.746 0.833 - - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
48. atp6ap2 ENSDARG00000008735 5096 1.577 - - - - - 0.751 0.826 - - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
49. fbp1a ENSDARG00000021366 1778 1.574 - - - - - 0.722 0.852 - - fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
50. tmem59 ENSDARG00000019033 2692 1.538 - - - - - 0.752 0.786 - - transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
51. COL28A1_1 COL28A1_1 11434 1.536 - - - - - 0.795 0.741 - -
52. srp72 ENSDARG00000014139 5221 1.533 - - - - - 0.737 0.796 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
53. ap1s1 ENSDARG00000056803 3854 1.53 - - - - - 0.707 0.823 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
54. gmps ENSDARG00000079848 8217 1.529 - 0.801 - - - - 0.728 - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
55. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.528 - - - 0.751 - - 0.777 - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
56. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.525 - - 0.708 - - - 0.817 - - claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
57. snd1 ENSDARG00000006766 12906 1.513 - 0.704 0.809 - - - - - - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
58. CPAMD8 ENSDARG00000056530 3481 1.512 - - - 0.753 - 0.759 - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
59. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 1.507 - - - 0.726 - 0.781 - - - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
60. krcp ENSDARG00000040224 5961 1.507 - - - - 0.718 - 0.789 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
61. eny2 ENSDARG00000070046 3741 1.502 - - - - - 0.748 0.754 - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
62. COL13A1 1565 1.494 - - - - - 0.747 0.747 - - collagen, type XIII, alpha 1, transcript variant X1
63. socs5a ENSDARG00000100717 6927 1.493 - - - - - 0.744 0.749 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
64. arf1l arf1l 9119 1.484 - - 0.705 - - - - - 0.779
65. msxb msxb 2650 1.482 - - - - - 0.748 - 0.734 -
66. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.476 - - - - - 0.736 0.740 - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
67. plxna4 ENSDARG00000019328 782 1.447 0.733 - - - - - 0.714 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
68. ndufb7 ENSDARG00000033789 5898 1.427 - - - 0.700 - - 0.727 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
69. klf3 ENSDARG00000015495, ENSDARG00000114143 1640 0.988 - 0.988 - - - - - - - Kruppel-like factor 3 (basic) [Source:ZFIN;Acc:ZDB-GENE-011116-1]
70. arhgef1b ENSDARG00000055837 2330 0.981 - 0.981 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
71. SRGAP3 ENSDARG00000060309 5353 0.981 - 0.981 - - - - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
72. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 0.976 - 0.976 - - - - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
73. sec24d ENSDARG00000045946 2395 0.972 - 0.972 - - - - - - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
74. dse ENSDARG00000017988 2169 0.97 - 0.970 - - - - - - - dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
75. sh3glb1 sh3glb1 1335 0.97 - 0.970 - - - - - - -
76. trappc4 ENSDARG00000027418 1491 0.97 - 0.970 - - - - - - - trafficking protein particle complex 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1734]
77. bag6 ENSDARG00000075892 3782 0.969 - 0.969 - - - - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
78. acadvl ENSDARG00000016687 5329 0.969 - 0.969 - - - - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
79. ak3 ENSDARG00000058226 3160 0.968 - 0.968 - - - - - - - adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
80. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 0.967 - 0.967 - - - - - - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
81. prrc1 ENSDARG00000044304 1567 0.966 - 0.966 - - - - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
82. ddx3 ddx3 4076 0.964 - 0.964 - - - - - - -
83. gata5 ENSDARG00000017821 1146 0.964 - 0.964 - - - - - - - GATA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-980526-340]
84. hmbox1b 597 0.963 - 0.963 - - - - - - - homeobox containing 1 b, transcript variant X3
85. ass1 8099 0.96 - 0.960 - - - - - - - argininosuccinate synthase 1
86. zc3h15 ENSDARG00000015889 3861 0.96 - 0.960 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
87. ptcd3 ENSDARG00000103856 2107 0.959 - 0.959 - - - - - - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
88. tex2 ENSDARG00000078186 2467 0.959 - 0.959 - - - - - - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
89. gyltl1b 1368 0.959 - 0.959 - - - - - - - glycosyltransferase-like 1b, transcript variant X3
90. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.958 - 0.958 - - - - - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
91. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 0.957 - 0.957 - - - - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
92. CT573468.1 CT573468.1 283 0.957 - 0.957 - - - - - - -
93. ptpn13 ENSDARG00000103699 2866 0.957 - 0.957 - - - - - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
94. akirin2 ENSDARG00000058729 13245 0.956 - 0.956 - - - - - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
95. CU928070.1 CU928070.1 1152 0.956 - 0.956 - - - - - - -
96. ing5b ENSDARG00000068175 2502 0.954 - 0.954 - - - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
97. trpc4apa ENSDARG00000018840 2543 0.954 - 0.954 - - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
98. march5l ENSDARG00000028559 943 0.954 - 0.954 - - - - - - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
99. syap1 ENSDARG00000012946 3560 0.953 - 0.953 - - - - - - - synapse associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-917]
100. pdia5 ENSDARG00000069242 3576 0.953 - 0.953 - - - - - - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]

There are 1050 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA