Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NFRKB

Gene Name Gene ID Reads Annotation
NFRKB ENSGALG00000001306 4469 nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]











Genes with expression patterns similar to NFRKB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NFRKB ENSGALG00000001306 4469 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
2. TJP1 ENSGALG00000042552 3081 1.675 - - - - - - 0.860 0.815 - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]
3. B4GAL-T7 B4GAL-T7 12356 1.617 - - - - - - 0.781 0.836 - -
4. CALCOCO2 ENSGALG00000001525 3121 1.617 - - - - - - 0.858 0.759 - - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
5. ATP5J 14451 1.6 - - - - - - 0.814 0.786 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
6. PPIL2 ENSGALG00000042052 4349 1.591 - - - - - - 0.875 0.716 - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
7. RUFY1 ENSGALG00000029706 4473 1.579 - - - - - - 0.878 0.701 - - RUN and FYVE domain containing 1 [Source:NCBI gene;Acc:426519]
8. PWP1 ENSGALG00000012631 10536 1.573 - - - - - - 0.839 0.734 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
9. PANK1 ENSGALG00000006431 2910 1.562 - - - - - - 0.847 0.715 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
10. GPX8 ENSGALG00000026704 4497 1.536 - - - - - - 0.802 0.734 - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
11. UFL1 ENSGALG00000015580 3845 1.529 - - - - - - 0.816 0.713 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
12. ADSS ENSGALG00000010702 7207 1.485 - - - - - - 0.743 0.742 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
13. LPCAT3 ENSGALG00000014570 7919 1.469 - - - - - - 0.731 0.738 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
14. ARFIP1 ENSGALG00000041361 7351 1.452 - - - - - - 0.703 0.749 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
15. C1GALT1 ENSGALG00000009752 7148 0.932 - - - - - - 0.932 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
16. MRPL23 ENSGALG00000006561 13737 0.929 - - - - - - 0.929 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
17. C12orf66 ENSGALG00000027682 2110 0.926 - - - - - - 0.926 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
18. LMO4 ENSGALG00000006252 3686 0.92 - - - - - - 0.920 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
19. TBC1D12 ENSGALG00000034044 5588 0.917 - - - - - - 0.917 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
20. BEND5 ENSGALG00000010505 3298 0.916 - - - - - - 0.916 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
21. DDX42 ENSGALG00000000581 8780 0.916 - - - - - - 0.916 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
22. CLN6 ENSGALG00000007981 5656 0.915 - - - - - - 0.915 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
23. ACTR10 ENSGALG00000012041 2752 0.914 - - - - - - 0.914 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
24. RNF144A ENSGALG00000028709 2855 0.912 - - - - - - 0.912 - - - ring finger protein 144A, transcript variant X1
25. GARNL3 ENSGALG00000000847 3423 0.909 - - - - - - 0.909 - - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
26. CAPN1 ENSGALG00000041685 4011 0.909 - - - - - - 0.909 - - - calpain 1 [Source:NCBI gene;Acc:693249]
27. NARFL ENSGALG00000005365 2668 0.907 - - - - - - 0.907 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
28. ETV5 ENSGALG00000005768 9679 0.906 - - - - - - 0.906 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
29. AP1AR ENSGALG00000028807 2398 0.906 - - - - - - 0.906 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
30. LRR1 ENSGALG00000012230 1062 0.9 - - - - - - 0.900 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
31. C9H21ORF2 C9H21ORF2 3161 0.9 - - - - - - 0.900 - - -
32. TAF1B ENSGALG00000016437 2318 0.899 - - - - - - 0.899 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
33. FAM86A FAM86A 1860 0.897 - - - - - - 0.897 - - -
34. LIG3 ENSGALG00000002288 7198 0.897 - - - - - - 0.897 - - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
35. THOC3 ENSGALG00000024172 7617 0.897 - - - - - - 0.897 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
36. USP25 ENSGALG00000015693 2567 0.896 - - - - - - 0.896 - - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
37. FBXW7 ENSGALG00000010103 5982 0.896 - - - - - - 0.896 - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
38. ZER1 ENSGALG00000004659 1635 0.896 - - - - - - 0.896 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
39. PRDM10 632 0.895 - - - - - - 0.895 - - - PR domain 10, transcript variant X10
40. USP5 ENSGALG00000014525 21883 0.895 - - - - - - 0.895 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
41. EML1 1941 0.895 - - - - - - 0.895 - - - echinoderm microtubule associated protein like 1, transcript variant X11
42. CLASP1 ENSGALG00000011645 1378 0.895 - - - - - - 0.895 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
43. LYRM4 ENSGALG00000027339 2917 0.894 - - - - - - 0.894 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
44. ANGPTL2 ENSGALG00000000927 2580 0.893 - - - - - - 0.893 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
45. TMEM14A ENSGALG00000019894 5279 0.893 - - - - - - 0.893 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
46. C11H19ORF12 C11H19ORF12 5149 0.893 - - - - - - 0.893 - - -
47. SQSTM1 ENSGALG00000035804 2238 0.892 - - - - - - 0.892 - - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
48. COG4 ENSGALG00000002603 4485 0.892 - - - - - - 0.892 - - - component of oligomeric golgi complex 4 [Source:NCBI gene;Acc:415681]
49. SALL1 ENSGALG00000039238 3740 0.892 - - - - - - 0.892 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
50. KCTD1 ENSGALG00000015124 6121 0.891 - - - - - - 0.891 - - - potassium channel tetramerization domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18249]
51. HYAL1 ENSGALG00000000785 1778 0.89 - - - - - - 0.890 - - - hyaluronoglucosaminidase 1, transcript variant X3
52. TSPAN13 ENSGALG00000027240 8999 0.89 - - - - - - 0.890 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
53. MYEOV2 MYEOV2 5155 0.89 - - - - - - 0.890 - - -
54. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.889 - - - - - - 0.889 - - -
55. CYTL1 ENSGALG00000015015 4438 0.889 - - - - - - 0.889 - - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
56. AP1S3 ENSGALG00000005171 2981 0.889 - - - - - - 0.889 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
57. RHOT2 ENSGALG00000002497 1744 0.889 - - - - - - 0.889 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
58. BTBD7 4136 0.889 - - - - - - 0.889 - - - BTB domain containing 7, transcript variant X2
59. EFNB1 ENSGALG00000036539 2706 0.888 - - - - - - 0.888 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
60. FXYD6 ENSGALG00000025937 4073 0.887 - - - - - - 0.887 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
61. AIFM1 ENSGALG00000004003 10451 0.887 - - - - - - - 0.887 - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
62. CLK3 ENSGALG00000001362 2171 0.887 - - - - - - 0.887 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
63. MYH15 ENSGALG00000015358 6304 0.884 - - - - - - 0.884 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
64. ZNF830 ENSGALG00000013156 3896 0.883 - - - - - - 0.883 - - - zinc finger protein 830
65. TMEM33 ENSGALG00000014248 6069 0.882 - - - - - - 0.882 - - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
66. C9orf85 ENSGALG00000026001 4110 0.882 - - - - - - 0.882 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
67. FREM3 ENSGALG00000020561 1824 0.881 - - - - - - 0.881 - - - FRAS1 related extracellular matrix 3
68. TNFRSF11B ENSGALG00000043167 911 0.881 - - - - - - 0.881 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
69. NNT ENSGALG00000014869 8496 0.881 - - - - - - 0.881 - - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
70. DTX2 ENSGALG00000001905 1475 0.88 - - - - - - 0.880 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
71. APCDD1 ENSGALG00000000894 1482 0.88 - - - - - - 0.880 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
72. ESCO1 ENSGALG00000014936 739 0.879 - - - - - - 0.879 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
73. CRELD2 ENSGALG00000008551 2084 0.878 - - - - - - 0.878 - - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
74. POLR3F ENSGALG00000008749 5645 0.878 - - - - - - 0.878 - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
75. RFFL ENSGALG00000002225 928 0.878 - - - - - - 0.878 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
76. C7orf55 C7orf55 7083 0.878 - - - - - - 0.878 - - -
77. ASTN2 ENSGALG00000007038 1748 0.877 - - - - - - 0.877 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
78. YWHAQ ENSGALG00000016433 3450 0.876 - - - - - - 0.876 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
79. MTFR1L ENSGALG00000000998 3457 0.875 - - - - - - 0.875 - - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
80. GNMT ENSGALG00000043290 3288 0.874 - - - - - - 0.874 - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
81. RAD51A RAD51A 2132 0.873 - - - - - - 0.873 - - -
82. COL22A1 ENSGALG00000038022 544 0.872 - - - - - - 0.872 - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
83. NEK7 ENSGALG00000002216 4532 0.872 - - - - - - 0.872 - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
84. ENSGALG00000000514 ENSGALG00000000514 9906 0.871 - - - - - - 0.871 - - -
85. ABHD13 ENSGALG00000016853 4975 0.871 - - - - - - 0.871 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
86. ARHGEF3 ENSGALG00000005481 683 0.87 - - - - - - 0.870 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
87. NUDCD1 ENSGALG00000040879 2965 0.87 - - - - - - 0.870 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
88. MRM1 ENSGALG00000039523 2009 0.87 - - - - - - 0.870 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
89. GADD45 GADD45 8780 0.87 - - - - - - 0.870 - - -
90. BSDC1 ENSGALG00000003405 3701 0.87 - - - - - - 0.870 - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
91. CINP ENSGALG00000011372 2366 0.87 - - - - - - 0.870 - - - cyclin dependent kinase 2 interacting protein [Source:NCBI gene;Acc:423467]
92. SLAIN2 ENSGALG00000014115 1292 0.867 - - - - - - 0.867 - - - SLAIN motif family member 2 [Source:HGNC Symbol;Acc:HGNC:29282]
93. BCAR3 358 0.867 - - - - - - 0.867 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
94. LPXN 133 0.866 - - - - - - 0.866 - - - leupaxin, transcript variant X4
95. FOXK2 ENSGALG00000001577 6346 0.866 - - - - - - 0.866 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
96. PTDSS2 ENSGALG00000004300 682 0.866 - - - - - - 0.866 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
97. FBXO33 ENSGALG00000010192 2917 0.866 - - - - - - 0.866 - - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
98. TP53BP1 ENSGALG00000042201 708 0.866 - - - - - - 0.866 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
99. KIAA1468 2062 0.866 - - - - - - 0.866 - - - KIAA1468, transcript variant X5
100. KATNA1 ENSGALG00000012378 1745 0.865 - - - - - - 0.865 - - - katanin catalytic subunit A1 [Source:NCBI gene;Acc:421626]

There are 414 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA