Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NFI1

Gene Name Gene ID Reads Annotation
NFI1 NFI1 6210











Genes with expression patterns similar to NFI1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NFI1 NFI1 6210 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. SLC25A20 ENSGALG00000028227 7685 2.3 - - 0.716 - - - 0.725 0.859 - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
3. SPCS3 ENSGALG00000010839 19106 2.2 - - 0.748 - - - 0.723 0.729 - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
4. HDHD2 ENSGALG00000034801 6373 1.795 - - 0.827 - - - - 0.968 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
5. LMNB2 ENSGALG00000000470 4364 1.74 - - 0.819 - - - - 0.921 - - lamin B2 [Source:NCBI gene;Acc:396222]
6. VAPB ENSGALG00000007549 15511 1.735 - - 0.751 - - - - 0.984 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
7. PPT1 ENSGALG00000003936 2540 1.701 - - 0.752 - - - - 0.949 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
8. PTPN11 ENSGALG00000004821 2658 1.678 - - - - - - 0.730 0.948 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
9. ADD1 ENSGALG00000015664 6828 1.666 - - - - - - 0.719 0.947 - - adducin 1 [Source:NCBI gene;Acc:422882]
10. TTYH2 ENSGALG00000026940 15628 1.623 - - - - - - 0.724 0.899 - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
11. APIP ENSGALG00000031286 6838 1.618 - - - - - - 0.707 0.911 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
12. SMC4 ENSGALG00000009553 15715 1.595 - - 0.846 - - - 0.749 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
13. TAX1BP1 ENSGALG00000042822 7728 1.586 - - 0.706 - - - - 0.880 - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
14. WASL ENSGALG00000008797 5729 1.557 - - - - - - 0.721 0.836 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
15. MYO5A ENSGALG00000031987 2469 1.539 - - 0.823 - - - 0.716 - - - myosin VA [Source:NCBI gene;Acc:396237]
16. SP3 ENSGALG00000031796 8997 1.506 - - 0.761 - - - 0.745 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
17. HCFC2 ENSGALG00000029616 4525 1.502 - - 0.743 - - - 0.759 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
18. DKC1 ENSGALG00000005054 30350 1.5 - - 0.746 - - - 0.754 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
19. TOR1AIP1 ENSGALG00000029238 5843 1.489 - - 0.727 - - - 0.762 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
20. UBE2B ENSGALG00000032664 6069 1.484 - - 0.736 - - - 0.748 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
21. SEPHS1 ENSGALG00000014575 10701 1.478 - - 0.777 - - - - 0.701 - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
22. TARDBP ENSGALG00000002906 24748 1.475 - - 0.718 - - - 0.757 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
23. FNBP1L ENSGALG00000005850 9219 1.473 - - 0.727 - - - 0.746 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
24. UTRN ENSGALG00000012256 9980 1.462 - - 0.744 - - - - 0.718 - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
25. TMEM167A ENSGALG00000027332 13862 1.431 - - 0.704 - - - 0.727 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
26. SPDL1 ENSGALG00000001942 4403 1.424 - - 0.721 - - - 0.703 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
27. RAB6A ENSGALG00000017320 10569 0.983 - - - - - - - 0.983 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
28. FKBP15 ENSGALG00000008838 3677 0.975 - - - - - - - 0.975 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
29. RNF10 ENSGALG00000036417 8027 0.973 - - - - - - - 0.973 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
30. LGALS1 ENSGALG00000012420 13993 0.971 - - - - - - - 0.971 - - galectin 1 [Source:NCBI gene;Acc:396491]
31. MRPL48 ENSGALG00000017319 9773 0.968 - - - - - - - 0.968 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
32. CHN1 ENSGALG00000009293 6415 0.964 - - - - - - - 0.964 - - chimerin 1 [Source:NCBI gene;Acc:429021]
33. IPO9 ENSGALG00000000397 9263 0.953 - - - - - - - 0.953 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
34. KDM4B ENSGALG00000034592 6711 0.953 - - - - - - - 0.953 - - lysine demethylase 4B, transcript variant X8
35. EPS15 ENSGALG00000010543 1598 0.951 - - - - - - - 0.951 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
36. QARS ENSGALG00000029980 4207 0.95 - - - - - - - 0.950 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
37. OMA1 ENSGALG00000010861 3328 0.95 - - - - - - - 0.950 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
38. ACAP2 ENSGALG00000007040 4182 0.95 - - - - - - - 0.950 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
39. PACSIN3 ENSGALG00000008231 5423 0.949 - - - - - - - 0.949 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
40. EED ENSGALG00000014060 6467 0.949 - - - - - - - 0.949 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
41. ADARB1 ENSGALG00000007527 2480 0.948 - - - - - - - 0.948 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
42. VPS13B 2293 0.948 - - - - - - - 0.948 - - vacuolar protein sorting 13 homolog B
43. KCTD9 ENSGALG00000000275 3455 0.948 - - - - - - - 0.948 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
44. MB21D1 2460 0.948 - - - - - - - 0.948 - - Mab-21 domain containing 1
45. MTRF1 ENSGALG00000016951 3983 0.948 - - - - - - - 0.948 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
46. gga-mir-1787 ENSGALG00000025542 1373 0.948 - - - - - - - 0.948 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
47. PGS1 ENSGALG00000007181 3187 0.948 - - - - - - - 0.948 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
48. KIAA1432 KIAA1432 1792 0.947 - - - - - - - 0.947 - -
49. FGFRL1 ENSGALG00000037525 1687 0.947 - - - - - - - 0.947 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
50. PRORSD1P ENSGALG00000034854 2924 0.946 - - - - - - - 0.946 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
51. H2AFY_1 ENSGALG00000040141 4895 0.946 - - - - - - - 0.946 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
52. ANKRD17 ENSGALG00000011642 3192 0.946 - - - - - - - 0.946 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
53. DENND5B 4077 0.945 - - - - - - - 0.945 - - DENN domain containing 5B, transcript variant X1
54. RIOK1 ENSGALG00000012795 4658 0.945 - - - - - - - 0.945 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
55. RBM6 ENSGALG00000035578 1690 0.945 - - - - - - - 0.945 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
56. CMC1 ENSGALG00000025811 3939 0.944 - - - - - - - 0.944 - - C-X9-C motif containing 1
57. MAK16 ENSGALG00000001663 7455 0.944 - - - - - - - 0.944 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
58. RHOT1 ENSGALG00000003397 5149 0.944 - - - - - - - 0.944 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
59. NAA50 ENSGALG00000033889 3551 0.943 - - - - - - - 0.943 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
60. SNCAIP ENSGALG00000005330 2425 0.942 - - - - - - - 0.942 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
61. TMEM100 ENSGALG00000026465 1785 0.942 - - - - - - - 0.942 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
62. KNOP1 ENSGALG00000002042 6251 0.942 - - - - - - - 0.942 - - lysine-rich nucleolar protein 1, transcript variant X1
63. ZMYM4 ENSGALG00000002499 435 0.942 - - - - - - - 0.942 - - zinc finger MYM-type containing 4, transcript variant X1
64. LIN7C ENSGALG00000012170 5043 0.942 - - - - - - - 0.942 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
65. ENSGALG00000026930 ENSGALG00000026930 681 0.941 - - - - - - - 0.941 - -
66. FBXW8 ENSGALG00000008207 1639 0.941 - - - - - - - 0.941 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
67. DDHD1 ENSGALG00000012426 6068 0.941 - - - - - - - 0.941 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
68. PAX-6 PAX-6 2650 0.941 - - - - - - - 0.941 - -
69. NFASC ENSGALG00000031776 4264 0.941 - - - - - - - 0.941 - - neurofascin [Source:NCBI gene;Acc:419824]
70. DOCK8 481 0.94 - - - - - - - 0.940 - - dedicator of cytokinesis 8, transcript variant X1
71. TECPR2 ENSGALG00000011373 1063 0.94 - - - - - - - 0.940 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
72. RPAP1 ENSGALG00000008624 3522 0.939 - - - - - - - 0.939 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
73. C3H2ORF43 C3H2ORF43 5628 0.939 - - - - - - - 0.939 - -
74. MED10 ENSGALG00000028336 9343 0.937 - - - - - - - 0.937 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
75. REST 2394 0.936 - - 0.936 - - - - - - - RE1 silencing transcription factor
76. FAS ENSGALG00000006351 461 0.934 - - - - - - - 0.934 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
77. VRK1 ENSGALG00000011116 4524 0.932 - - - - - - - 0.932 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
78. UFD1L 12964 0.928 - - - - - - - 0.928 - - ubiquitin fusion degradation 1 like (yeast)
79. SNAPC5 ENSGALG00000007695 4117 0.924 - - - - - - - 0.924 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
80. FAM192A ENSGALG00000021473 10213 0.92 - - - - - - - 0.920 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
81. RBP5 ENSGALG00000014662 31268 0.914 - - - - - - - 0.914 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
82. ACADSB ENSGALG00000041417 7710 0.912 - - - - - - - 0.912 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
83. ATP8B1 ENSGALG00000030834 521 0.911 - - - - - - - 0.911 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
84. ERLIN1 ENSGALG00000003308 6427 0.91 - - - - - - - 0.910 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
85. THOC2 ENSGALG00000008507 9501 0.906 - - 0.906 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
86. KXD1 ENSGALG00000036736 3771 0.906 - - - - - - - 0.906 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
87. STT3B ENSGALG00000011465 11939 0.906 - - - - - - - 0.906 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
88. WBP11 ENSGALG00000011745 11182 0.904 - - - - - - - 0.904 - - WW domain binding protein 11, transcript variant X1
89. ADIPOR2 ENSGALG00000035533 6523 0.9 - - 0.900 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
90. SETD1B ENSGALG00000004324 2897 0.891 - - 0.891 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
91. IGF2BP2 ENSGALG00000033195 11421 0.89 - - - - - - - 0.890 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
92. RALGAPA2 240 0.888 - - 0.888 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
93. SENP6 ENSGALG00000015901 8013 0.886 - - 0.886 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
94. LBR 6686 0.878 - - 0.878 - - - - - - - lamin B receptor, transcript variant X4
95. MAP4K3 ENSGALG00000039720 5124 0.878 - - 0.878 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
96. BMS1 ENSGALG00000002624 8339 0.876 - - 0.876 - - - - - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
97. ATF7IP ENSGALG00000011814 1571 0.873 - - 0.873 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
98. STXBP6 ENSGALG00000009847 224 0.872 - - 0.872 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
99. TMEM242 ENSGALG00000013689 377 0.87 - - 0.870 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
100. RECQL ENSGALG00000013174 1323 0.87 - - 0.870 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]

There are 593 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA