Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for NF1

Gene Name Gene ID Reads Annotation
NF1 NF1 62










Genes with expression patterns similar to NF1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. NF1 NF1 62 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. TTC18 TTC18 58 2.447 - - - 0.856 - 0.725 - 0.866 -
3. si:ch73-83c10.2 si:ch73-83c10.2 22 1.854 - - - 0.903 - - 0.951 - -
4. si:ch73-91k6.1 18 1.786 0.939 0.847 - - - - - - - si:ch73-91k6.1
5. cabp5a ENSDARG00000002576 14 1.769 - 0.955 - - 0.814 - - - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
6. PRPF6 ENSDARG00000091367 48 1.766 - 0.815 - - - - 0.951 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
7. si:ch211-197n1.2 58 1.764 - - - - 0.837 0.927 - - - si:ch211-197n1.2, transcript variant X1
8. THEM6 ENSDARG00000103914 49 1.763 - 0.818 - - - - 0.945 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
9. wu:fe38f03 wu:fe38f03 22 1.755 - - - 0.804 - - 0.951 - -
10. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 1.748 0.855 - - - - - - 0.893 - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
11. 5S_rRNA_15 5S_rRNA_15 9 1.736 - 0.847 - - - - - 0.889 -
12. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1.734 - 0.847 - 0.887 - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
13. CU856140.1 CU856140.1 4316 1.719 0.939 - - - - 0.780 - - -
14. CABZ01015475.1 ENSDARG00000104841 6 1.714 - 0.763 - - - - 0.951 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
15. lrrc48 lrrc48 50 1.714 - 0.763 - - - - 0.951 - -
16. trim3a ENSDARG00000063711 44 1.708 - 0.757 - - - - 0.951 - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
17. si:ch211-210h11.7 si:ch211-210h11.7 32 1.703 - 0.819 - - - - - 0.884 -
18. nfatc1 ENSDARG00000036168 16 1.692 - 0.741 - - - - 0.951 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
19. CR388042.1 ENSDARG00000106267 18 1.687 - 0.765 - - - - 0.922 - -
20. cdx4 ENSDARG00000036292 1225 1.687 - - - - - - 0.876 0.811 - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
21. si:ch211-161m3.4 ENSDARG00000103375 10 1.683 - 0.847 - 0.836 - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
22. KCNJ6 ENSDARG00000058985 71 1.683 - - - - 0.716 - 0.967 - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
23. SLC7A8 SLC7A8 25 1.675 0.939 - - - 0.736 - - - -
24. slc8a4b ENSDARG00000037145 46 1.671 - - - - - 0.771 0.900 - - solute carrier family 8 (sodium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-050809-103]
25. JAKMIP1 ENSDARG00000076090 55 1.67 - - - - - - 0.846 0.824 - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
26. si:dkey-151m22.8 ENSDARG00000095934 41 1.67 0.894 0.776 - - - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
27. si:dkey-23a23.3 ENSDARG00000088214 86 1.668 0.843 0.825 - - - - - - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
28. bhlha15 ENSDARG00000045166 67 1.658 - 0.849 - - - - - 0.809 - basic helix-loop-helix family, member a15 [Source:ZFIN;Acc:ZDB-GENE-070803-3]
29. SNORD14 SNORD14 31 1.652 - 0.701 - - - - 0.951 - -
30. si:dkey-32e6.3 ENSDARG00000092934 133 1.65 0.844 0.806 - - - - - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
31. si:dkey-1f1.4 si:dkey-1f1.4 105 1.65 0.864 - - - - - - 0.786 -
32. evlb ENSDARG00000099720 245 1.647 0.814 - - - - - 0.833 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
33. FAM26E FAM26E 79 1.638 0.913 - - - 0.725 - - - -
34. GEMIN6 ENSDARG00000105394 130 1.636 - 0.807 - - - - - 0.829 - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
35. ENTHD1 ENTHD1 235 1.635 - 0.759 - - - - 0.876 - -
36. si:ch211-259i2.2 si:ch211-259i2.2 45 1.622 - 0.847 - - - - - 0.775 -
37. s100b ENSDARG00000057598 41 1.619 - 0.776 - - - - 0.843 - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
38. mif4gda ENSDARG00000102080, ENSDARG00000115033, ENSDARG00000117121 198 1.61 0.807 0.803 - - - - - - - MIF4G domain containing a [Source:ZFIN;Acc:ZDB-GENE-040426-1382]
39. eif4enif1 ENSDARG00000016177 238 1.604 0.785 0.819 - - - - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
40. PARP14 PARP14 164 1.603 0.894 - - 0.709 - - - - -
41. WDR93 ENSDARG00000087191 51 1.602 - - - - 0.844 - 0.758 - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
42. si:dkey-38p12.2 si:dkey-38p12.2 504 1.585 0.838 0.747 - - - - - - -
43. foxf2a ENSDARG00000017195 345 1.583 0.831 0.752 - - - - - - - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
44. rpgra ENSDARG00000056617 77 1.582 0.839 0.743 - - - - - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
45. LRFN4 LRFN4 59 1.548 - - - - - - 0.827 0.721 -
46. med18 ENSDARG00000041237 247 1.543 - - - - - 0.729 0.814 - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
47. asb6 ENSDARG00000007125 389 1.511 - 0.783 - - - - - 0.728 - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
48. cdc14aa ENSDARG00000013858 18 1.501 - - - 0.730 - - 0.771 - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
49. haus3 ENSDARG00000061385, ENSDARG00000110959 343 1.498 - - - - - 0.714 0.784 - - HAUS augmin-like complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060929-592]
50. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.495 - - - 0.745 - - 0.750 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
51. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1.491 - 0.757 - - - - 0.734 - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
52. dlg4 88 1.488 - 0.702 - - - - 0.786 - - discs large MAGUK scaffold protein 4, transcript variant X5
53. zgc:193811 ENSDARG00000076745 72 1.488 - - - - - - 0.752 0.736 - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
54. PAMR1 ENSDARG00000093480 40 1.485 - 0.763 - - 0.722 - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
55. dtnbb ENSDARG00000013020 280 1.465 - - - - - - 0.764 0.701 - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
56. lmo1 ENSDARG00000034504 260 1.422 - 0.708 - - - - 0.714 - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
57. CCSAP CCSAP 147 1 - - - - - - 1.000 - -
58. si:dkey-3p4.8 ENSDARG00000114124 82 1 - - - - - 1.000 - - - si:dkey-3p4.8 [Source:ZFIN;Acc:ZDB-GENE-120215-16]
59. dclre1a ENSDARG00000091768 94 1 - - - - - 1.000 - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
60. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.999 - - - - - - 0.999 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
61. GADD45G_1 GADD45G_1 236 0.998 - - - - - - 0.998 - -
62. hs3st1l2 ENSDARG00000035578 279 0.995 - - - - - - 0.995 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
63. CU929133.1 CU929133.1 94 0.982 0.982 - - - - - - - -
64. kcnj1b ENSDARG00000002666 87 0.979 - - - - - - 0.979 - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
65. chrna2a ENSDARG00000006602 163 0.973 - - - - - - 0.973 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
66. FAM183B FAM183B 25 0.973 0.973 - - - - - - - -
67. diras1a ENSDARG00000028066 126 0.972 - - - - - - 0.972 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
68. KCNJ10 KCNJ10 62 0.972 0.972 - - - - - - - -
69. sult4a1 ENSDARG00000101967 205 0.97 - - - - - - 0.970 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
70. SMARCAD1 SMARCAD1 104 0.968 - - - - - - 0.968 - -
71. kcnn1a ENSDARG00000091306 95 0.968 - - - - - - 0.968 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
72. FUT9 FUT9 91 0.967 - - - - - - 0.967 - -
73. CDH12 CDH12 44 0.967 - - - - - - 0.967 - -
74. SLITRK4 ENSDARG00000079781 54 0.967 - - - - - - 0.967 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
75. lgi3 ENSDARG00000041358 46 0.967 - - - - - - 0.967 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
76. CABZ01021538.1 CABZ01021538.1 67 0.967 - - - - - - 0.967 - -
77. dlgap3 ENSDARG00000055459 85 0.966 - - - - - - 0.966 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
78. nrxn3b ENSDARG00000062693 192 0.966 - - - - - - 0.966 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
79. plcxd3 ENSDARG00000054794 112 0.965 - - - - - - 0.965 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
80. prdm13 ENSDARG00000078701 205 0.965 - - - - - - 0.965 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
81. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 0.965 - - - - - - 0.965 - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
82. glrba ENSDARG00000052782, ENSDARG00000117018 4 0.965 - - - - - - 0.965 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
83. LRCH4 ENSDARG00000068258 22 0.965 - - - - - - 0.965 - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
84. egr3 ENSDARG00000089156 71 0.965 - - - - - - 0.965 - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
85. CU459160.1 CU459160.1 104 0.965 - - - - - - 0.965 - -
86. TRIM46 TRIM46 73 0.965 - - - - - - 0.965 - -
87. BRINP3 BRINP3 11 0.965 - - - - - - 0.965 - -
88. TAF1C TAF1C 41 0.965 - 0.965 - - - - - - -
89. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 0.965 - - - - - - 0.965 - -
90. b3galnt2 ENSDARG00000046133 68 0.965 - - - - - - 0.965 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
91. AL929252.1 AL929252.1 81 0.965 - - - - - - 0.965 - -
92. SPIN4 SPIN4 120 0.965 - - - - - - 0.965 - -
93. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 0.965 - - - - - - 0.965 - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
94. rtn4r ENSDARG00000090035 46 0.965 - - - - - - 0.965 - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
95. MAPKBP1 ENSDARG00000103746 4 0.965 - - - - - - 0.965 - - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
96. si:ch73-389b16.2 ENSDARG00000103802 340 0.964 - - - - - - 0.964 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
97. crb1 ENSDARG00000100506, ENSDARG00000110621 373 0.963 - - - - - - 0.963 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
98. TMEM100_1 TMEM100_1 44 0.962 - - - - - - 0.962 - -
99. si:ch211-117c9.5 ENSDARG00000071235 154 0.962 - - - - - - 0.962 - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
100. INSM2 ENSDARG00000020655 122 0.962 - - - - - - 0.962 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]

There are 1546 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA