Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NEXN

Gene Name Gene ID Reads Annotation
NEXN ENSGALG00000008945 1504 nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]











Genes with expression patterns similar to NEXN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NEXN ENSGALG00000008945 1504 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
2. gga-mir-7474 ENSGALG00000033766 5727 4.667 0.719 - 0.869 0.797 - 0.794 - - 0.703 0.785 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
3. ACTC1 ENSGALG00000009844 20914 3.137 0.708 - 0.878 0.787 - - - - - 0.764 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
4. TNNT3 ENSGALG00000006572 1652 2.372 - - 0.889 0.748 - - - - - 0.735 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
5. C1QTNF3 ENSGALG00000027887 8646 1.684 - - 0.892 0.792 - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
6. ENSGALG00000028654 ENSGALG00000028654 236 1.67 - - 0.818 0.852 - - - - - -
7. TITIN TITIN 589 1.612 0.746 - - 0.866 - - - - - -
8. TRIM55 ENSGALG00000041327 1097 1.572 0.730 - 0.842 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
9. MYL2_1 ENSGALG00000004582 2367 1.547 - - 0.799 0.748 - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
10. ACTA1 ENSGALG00000011086 2543 1.54 - - 0.797 0.743 - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
11. MYH1D ENSGALG00000027323 365 1.53 - - 0.749 0.781 - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
12. RBM24 ENSGALG00000012712 4138 1.523 0.721 - 0.802 - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
13. CRIP1 ENSGALG00000002771 4270 1.522 - - 0.767 0.755 - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
14. TPM1 ENSGALG00000003521 11894 1.519 - - 0.773 0.746 - - - - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
15. BHMT ENSGALG00000004518 4700 1.514 - - 0.724 - - - - - - 0.790 betaine--homocysteine S-methyltransferase
16. SH3BGR ENSGALG00000016127 2561 1.494 0.713 - 0.781 - - - - - - - SH3 domain binding glutamate rich protein
17. XIRP1 ENSGALG00000006025 729 1.451 - - 0.714 0.737 - - - - - - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
18. MYL1 ENSGALG00000002907 1300 1.419 - - 0.708 0.711 - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
19. BCHE ENSGALG00000034860 298 0.848 - - - - - - - 0.848 - - butyrylcholinesterase [Source:NCBI gene;Acc:395358]
20. ACTN2 ENSGALG00000014463 1724 0.847 - - 0.847 - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
21. TMEM182 ENSGALG00000038936 274 0.838 - - 0.838 - - - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
22. MYOG ENSGALG00000000172 460 0.838 - - 0.838 - - - - - - - myogenin [Source:NCBI gene;Acc:374004]
23. SEC24D ENSGALG00000011998 68 0.835 - - - - - - 0.835 - - - SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
24. ACBD7 ENSGALG00000019663 2328 0.825 - - 0.825 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
25. BVES ENSGALG00000015410 435 0.82 0.820 - - - - - - - - - blood vessel epicardial substance [Source:NCBI gene;Acc:408032]
26. SERPINE2 ENSGALG00000005135 16108 0.819 - - 0.819 - - - - - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
27. GJD2 ENSGALG00000009845 236 0.817 - - 0.817 - - - - - - - gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
28. GRB2 ENSGALG00000008016 216 0.816 - - - - - 0.816 - - - - growth factor receptor bound protein 2 [Source:NCBI gene;Acc:386572]
29. LMOD2 ENSGALG00000008805 113 0.813 0.813 - - - - - - - - - leiomodin 2 [Source:NCBI gene;Acc:417751]
30. AKR1D1 ENSGALG00000012834 15183 0.809 - - 0.809 - - - - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
31. MYL3 ENSGALG00000005448 3379 0.809 - - 0.809 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
32. EBF2 ENSGALG00000000242 753 0.807 - - 0.807 - - - - - - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
33. TMEM231 ENSGALG00000003219 53 0.806 - - - - - - - 0.806 - - transmembrane protein 231 [Source:NCBI gene;Acc:425108]
34. KANK3 ENSGALG00000000621 112 0.799 - - - - - - - 0.799 - - KN motif and ankyrin repeat domains 3 [Source:HGNC Symbol;Acc:HGNC:24796]
35. SPON1 ENSGALG00000038775 16503 0.795 - - 0.795 - - - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
36. TNNI2 ENSGALG00000006591 690 0.793 - - 0.793 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
37. NGFR ENSGALG00000035950 13452 0.791 - - 0.791 - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
38. FILIP1 ENSGALG00000039001 892 0.783 0.783 - - - - - - - - - filamin A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:21015]
39. HSPB8 ENSGALG00000007383 5333 0.783 - - 0.783 - - - - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
40. AHCY ENSGALG00000033677 35555 0.778 - - 0.778 - - - - - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
41. PITRM1 ENSGALG00000007036 244 0.774 - - - - - - - 0.774 - - pitrilysin metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:17663]
42. SCAF11 ENSGALG00000028849 2603 0.773 - - - - - 0.773 - - - - SR-related CTD-associated factor 11 [Source:NCBI gene;Acc:417805]
43. SPAG9 ENSGALG00000034001 2314 0.771 - - - - - 0.771 - - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
44. MPP6 ENSGALG00000010988 1904 0.77 - - - - - 0.770 - - - - membrane palmitoylated protein 6 [Source:HGNC Symbol;Acc:HGNC:18167]
45. CPZ ENSGALG00000030209 8822 0.768 - - - 0.768 - - - - - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
46. ARHGAP20 ENSGALG00000017150 100 0.763 - - - - - - - 0.763 - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
47. CCDC141 ENSGALG00000020788 606 0.763 0.763 - - - - - - - - - coiled-coil domain containing 141, transcript variant X5
48. LIMCH1 ENSGALG00000014258 1987 0.762 - - 0.762 - - - - - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
49. TNNC2 ENSGALG00000006835 2963 0.761 - - 0.761 - - - - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
50. RAC3 ENSGALG00000040606 355 0.758 - - - - - 0.758 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
51. SLC38A11 ENSGALG00000011052 386 0.757 - - - - - - 0.757 - - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
52. PRKACB ENSGALG00000028530 12506 0.757 - - - - - 0.757 - - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
53. MYBPC1 ENSGALG00000012783 317 0.757 - - 0.757 - - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
54. EDNRB ENSGALG00000016912 2851 0.756 - - 0.756 - - - - - - - endothelin receptor type B [Source:NCBI gene;Acc:408082]
55. CELF1 ENSGALG00000008097 4717 0.753 - - - - - 0.753 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
56. TNNT2 ENSGALG00000000302 568 0.752 - - 0.752 - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
57. TUBA8A ENSGALG00000013056 32 0.752 - - - - - - 0.752 - - - tubulin alpha 8a
58. RAB32 ENSGALG00000012300 568 0.75 - - - - - - 0.750 - - - RAB32, member RAS oncogene family [Source:NCBI gene;Acc:421616]
59. NANOS1 ENSGALG00000027980 801 0.75 - - - - - - - 0.750 - - nanos C2HC-type zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:23044]
60. GFRA2 ENSGALG00000032856 1314 0.749 - - 0.749 - - - - - - - GDNF family receptor alpha 2 [Source:NCBI gene;Acc:395993]
61. PMP22 ENSGALG00000031425 5358 0.747 - - 0.747 - - - - - - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
62. MYF5 ENSGALG00000028091 1965 0.747 - - 0.747 - - - - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
63. MYOM2 ENSGALG00000016342 62 0.747 0.747 - - - - - - - - - myomesin 2 [Source:NCBI gene;Acc:396034]
64. LASP-2 LASP-2 4415 0.746 0.746 - - - - - - - - -
65. KLHL31 ENSGALG00000016309 1518 0.746 - - 0.746 - - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
66. EIF2AK4 ENSGALG00000009611 2164 0.745 - - - - - 0.745 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
67. ALB ENSGALG00000035219 233 0.743 - - - - - - - 0.743 - - albumin [Source:NCBI gene;Acc:396197]
68. ELMSAN1 ENSGALG00000009282 79 0.741 - - - - - 0.741 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
69. THNSL1 ENSGALG00000007677 287 0.74 - - - - - - - 0.740 - - threonine synthase like 1 [Source:HGNC Symbol;Acc:HGNC:26160]
70. SSPN ENSGALG00000014042 638 0.74 - - 0.740 - - - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
71. PRUNE PRUNE 452 0.739 - - - - - 0.739 - - - -
72. ANG-1 ANG-1 5239 0.738 0.738 - - - - - - - - -
73. CDHR2 ENSGALG00000003285 7 0.738 - - - - - - - 0.738 - - cadherin related family member 2 [Source:HGNC Symbol;Acc:HGNC:18231]
74. SCARF2 ENSGALG00000034560 6945 0.738 - - 0.738 - - - - - - - scavenger receptor class F member 2 [Source:HGNC Symbol;Acc:HGNC:19869]
75. ABCC9 ENSGALG00000013244 2153 0.734 - - 0.734 - - - - - - - ATP binding cassette subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:60]
76. PLA2G4A ENSGALG00000005065 1006 0.733 - - - - - 0.733 - - - - phospholipase A2 group IVA [Source:NCBI gene;Acc:396394]
77. TNNI1 ENSGALG00000000313 4069 0.733 - - 0.733 - - - - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
78. CSRNP3 ENSGALG00000010971 539 0.731 - - - - - - - 0.731 - - cysteine and serine rich nuclear protein 3 [Source:HGNC Symbol;Acc:HGNC:30729]
79. LIMD2 ENSGALG00000000529 30617 0.73 - - - - - - - - - 0.730 LIM domain containing 2 [Source:NCBI gene;Acc:419955]
80. TECRL ENSGALG00000038771 126 0.73 0.730 - - - - - - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
81. MCC ENSGALG00000000208 61 0.728 - - - - - 0.728 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
82. UBA7 ENSGALG00000036263 2918 0.728 - - 0.728 - - - - - - - ubiquitin-like modifier activating enzyme 7
83. Mar-03 Mar-03 45 0.725 - - - 0.725 - - - - - -
84. ECHDC1 ENSGALG00000014828 958 0.725 - - - - - 0.725 - - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
85. DIAPH3 ENSGALG00000016937 1069 0.724 - - - - - 0.724 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
86. ENSGALG00000010113 ENSGALG00000010113 508 0.722 - - - 0.722 - - - - - -
87. HSPB7L ENSGALG00000028183 795 0.721 0.721 - - - - - - - - - heat shock protein beta-7-like
88. DSEL ENSGALG00000042505 92 0.721 - - - - - 0.721 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
89. CEP290 ENSGALG00000011177 1559 0.72 - - - - - 0.720 - - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
90. GYPC ENSGALG00000011566 99 0.719 - - - - - 0.719 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
91. ADNP2 ENSGALG00000035669 318 0.718 - - - - - 0.718 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
92. JAKMIP2 ENSGALG00000007593 95 0.718 - - - - - 0.718 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
93. PLEKHH3 ENSGALG00000037269 875 0.717 - - - - - - - 0.717 - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
94. MEOX2 ENSGALG00000010794 1556 0.716 - - 0.716 - - - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
95. LUM ENSGALG00000011271 44020 0.714 - - - - - - - - - 0.714 lumican [Source:NCBI gene;Acc:417891]
96. RAD54B ENSGALG00000043597 1699 0.714 - - - - - 0.714 - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
97. SMG7 ENSGALG00000004667 707 0.714 - - - - - - - 0.714 - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
98. TUBGCP5 ENSGALG00000016735 279 0.713 - - - - - 0.713 - - - - tubulin gamma complex associated protein 5 [Source:HGNC Symbol;Acc:HGNC:18600]
99. CARKD CARKD 2914 0.713 - - - - - 0.713 - - - -
100. TPM4 ENSGALG00000002563 15621 0.713 0.713 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA