Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NEFM

Gene Name Gene ID Reads Annotation
NEFM ENSGALG00000000317 6992 neurofilament medium [Source:NCBI gene;Acc:396206]











Genes with expression patterns similar to NEFM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NEFM ENSGALG00000000317 6992 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 neurofilament medium [Source:NCBI gene;Acc:396206]
2. NEFL ENSGALG00000000314 4883 4.028 - 0.739 - 0.805 0.709 0.832 - - - 0.943 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
3. NFASC ENSGALG00000031776 4264 3.427 - - 0.944 0.828 - 0.778 - - - 0.877 neurofascin [Source:NCBI gene;Acc:419824]
4. TAGLN3 ENSGALG00000015379 7865 3.147 - - - 0.844 0.774 0.740 - - - 0.789 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
5. NHLH1 ENSGALG00000025817 1617 3.116 - - 0.749 0.794 0.744 - - - - 0.829 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
6. NSG1 ENSGALG00000015010 5829 2.597 - - - - - 0.866 0.861 - - 0.870 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
7. ASTN1 ENSGALG00000004472 855 2.579 - - - - - 0.906 - 0.847 - 0.826 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
8. ELAVL4 ENSGALG00000010533 4978 2.556 - - - 0.853 0.800 - - - - 0.903 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
9. RTN1 ENSGALG00000012006 2438 2.467 - - - 0.717 - 0.790 - - - 0.960 reticulon 1 [Source:NCBI gene;Acc:378791]
10. GPM6A ENSGALG00000043480 2133 2.419 - - - 0.779 0.749 - - - - 0.891 glycoprotein M6A [Source:NCBI gene;Acc:422569]
11. HES5 ENSGALG00000001141 6514 2.343 - - - 0.718 0.757 0.868 - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
12. MNR2 ENSGALG00000011349 3340 2.281 - - - 0.771 0.727 - - - - 0.783 homeodomain protein
13. ZBTB18 ENSGALG00000010705 3433 2.262 - - - 0.749 0.713 - - - - 0.800 zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
14. LFNG ENSGALG00000038515 5178 1.784 - - - - - 0.887 0.897 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
15. FABP7 ENSGALG00000038933 6780 1.725 - - - - - 0.877 - - - 0.848 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
16. DENND5B 4077 1.689 - - - - - 0.862 - - - 0.827 DENN domain containing 5B, transcript variant X1
17. CRABP-I ENSGALG00000003193 67258 1.685 - - - 0.798 - 0.887 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
18. STMN2 ENSGALG00000039690 989 1.672 - - - 0.757 - - - - - 0.915 stathmin 2 [Source:NCBI gene;Acc:396095]
19. DCLK2 ENSGALG00000032386 2253 1.667 - - - - - 0.789 0.878 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
20. MARCKSL1 ENSGALG00000032335 88728 1.665 - - - - - 0.855 - - - 0.810 MARCKS like 1 [Source:NCBI gene;Acc:770764]
21. MYT1 ENSGALG00000005932 2017 1.657 - - - 0.723 - - - - - 0.934 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
22. MAP2 ENSGALG00000002789 6597 1.643 - - - - - 0.800 - - - 0.843 microtubule associated protein 2, transcript variant X33
23. MURC 3759 1.612 - - - - - 0.802 - - - 0.810 muscle related coiled-coil protein
24. MYT1L ENSGALG00000016384 147 1.61 - - - - - 0.738 - - - 0.872 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
25. OPTC ENSGALG00000003554 3698 1.606 - - - - - 0.901 0.705 - - - opticin [Source:NCBI gene;Acc:395130]
26. CSPG5 ENSGALG00000032184 991 1.604 - - - - 0.772 0.832 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
27. NIN ENSGALG00000012361 2284 1.604 - - - - - 0.731 0.873 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
28. UCH-L1 UCH-L1 12697 1.587 - - - - - - 0.791 - - 0.796
29. PTN ENSGALG00000040493 864 1.561 - - - - - 0.724 0.837 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
30. DACH1 ENSGALG00000037015 5648 1.561 - - - - - 0.813 - - - 0.748 dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
31. DLL1 ENSGALG00000011182 1613 1.552 - - - 0.702 - 0.850 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
32. PAX-6 PAX-6 2650 1.551 - - - - 0.736 0.815 - - - -
33. CKB ENSGALG00000011511 2100 1.537 - - - - - 0.827 - - - 0.710 creatine kinase B [Source:NCBI gene;Acc:396248]
34. ENSGALG00000027373 ENSGALG00000027373 2129 1.533 - - - - - 0.730 0.803 - - -
35. NOVA1 ENSGALG00000009850 7584 1.531 - - 0.770 - - - - - - 0.761 uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
36. SYT4 ENSGALG00000042626 384 1.53 - - - - 0.743 - - - - 0.787 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
37. CRMP1B CRMP1B 18633 1.529 - - - - 0.729 - - - - 0.800
38. PTPRZ1 ENSGALG00000040114 3410 1.521 - - - - 0.733 0.788 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
39. TRABD2A ENSGALG00000026395 704 1.517 - - - - - 0.739 0.778 - - - TraB domain containing 2A, transcript variant X3
40. WNT4 ENSGALG00000041708 1277 1.516 - - - - - 0.809 0.707 - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
41. TUBB2B ENSGALG00000012821 41535 1.512 - - - - - 0.721 - - - 0.791 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
42. GADD45_1 GADD45_1 1433 1.503 - - - - 0.716 - - - - 0.787
43. TMSB10 TMSB10 518 1.452 - - 0.706 - - - - - - 0.746
44. CXCR4 ENSGALG00000012357 1320 1.452 - - - - - 0.748 - - - 0.704 C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
45. ISL1 ENSGALG00000014884 7666 0.927 - - - - - - - - - 0.927 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
46. SPAG9 ENSGALG00000034001 2314 0.912 - - - - - - 0.912 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
47. GRM3 ENSGALG00000006576 474 0.912 - - - - - - - - - 0.912 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
48. ANO3 ENSGALG00000013311 16 0.901 - - - - - - - 0.901 - - anoctamin 3 [Source:NCBI gene;Acc:422968]
49. CERCAM ENSGALG00000004986 5158 0.901 - - - - - 0.901 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
50. SLC16A4 ENSGALG00000000417 168 0.901 - - - - - - - 0.901 - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
51. ZIC1 ENSGALG00000040532 6543 0.892 - - - - - 0.892 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
52. SPG11 ENSGALG00000008180 1890 0.892 - - - - - - 0.892 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
53. EF1A EF1A 2378 0.892 - - - - - - - - - 0.892
54. SDK2 ENSGALG00000031895 2682 0.889 - - - - - - 0.889 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
55. PLPPR1 ENSGALG00000015542 3179 0.887 - - - - - - - - - 0.887 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
56. SNAP25 ENSGALG00000009003 222 0.886 - - - - - - - - - 0.886 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
57. CHGA ENSGALG00000010820 1028 0.886 - - - 0.886 - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
58. CEP290 ENSGALG00000011177 1559 0.885 - - - - - - 0.885 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
59. MAP1B ENSGALG00000014999 6288 0.883 - - - - - - - - - 0.883 microtubule associated protein 1B
60. COPS8 ENSGALG00000033385 10166 0.882 - - - - - - 0.882 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
61. CCDC28B ENSGALG00000003241 459 0.881 - - - - - - - 0.881 - - coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
62. SIAT8C SIAT8C 178 0.881 - - - - - - - - - 0.881
63. FAM57A ENSGALG00000004820 1492 0.88 - - - - - - 0.880 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
64. FAM167B ENSGALG00000003301 11 0.879 - - - - - - - 0.879 - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
65. TTLL7 ENSGALG00000008850 49 0.879 - - - - - - - 0.879 - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
66. IL6 ENSGALG00000010915 8 0.879 - - - - - - - 0.879 - - interleukin 6 [Source:NCBI gene;Acc:395337]
67. ZHX1 ENSGALG00000034999 21 0.879 - - - - - - - 0.879 - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
68. AGO2 ENSGALG00000040957 25 0.879 - - - - - - - 0.879 - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
69. EHF ENSGALG00000007817 11 0.879 - - - - - - - 0.879 - - ETS homologous factor [Source:NCBI gene;Acc:425791]
70. uc uc 37 0.879 - - - - - - - 0.879 - -
71. IL15RA ENSGALG00000008153 3 0.879 - - - - - - - 0.879 - - interleukin 15 receptor, alpha, transcript variant X2
72. RASGEF1B 2014 0.879 - - - - - - 0.879 - - - RasGEF domain family member 1B, transcript variant X8
73. MSL2 ENSGALG00000039294 55 0.879 - - - - - - - 0.879 - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
74. FGFR3 ENSGALG00000015708 16853 0.879 - - - - - 0.879 - - - - fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
75. DCBLD1 ENSGALG00000014907 19 0.879 - - - - - - - 0.879 - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
76. DUS4L ENSGALG00000023661 29 0.879 - - - - - - - 0.879 - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
77. FAM193A ENSGALG00000015667 3075 0.878 - - - - - - 0.878 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
78. CCNL1 ENSGALG00000009699 1033 0.877 - - - - - - 0.877 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
79. gga-mir-125b gga-mir-125b 146 0.876 - - - - - - - 0.876 - -
80. ZBTB16 ENSGALG00000038540 5544 0.873 - - - - - 0.873 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
81. ERMP1 ENSGALG00000000438 1136 0.871 - - - - - - 0.871 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
82. SGSM3 ENSGALG00000012033 1839 0.871 - - - - - - 0.871 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
83. USP20 ENSGALG00000041104 3186 0.87 - - - - - - 0.870 - - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
84. BMI1 ENSGALG00000041267 6618 0.87 - - - - - - 0.870 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
85. ENSGALG00000013233 ENSGALG00000013233 3265 0.87 - - - - - - 0.870 - - -
86. MBTPS1 ENSGALG00000003293 4843 0.87 - - - - - - 0.870 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
87. WIPI1 ENSGALG00000004215 3359 0.869 - - - - - - 0.869 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
88. UBE2O ENSGALG00000001971 77 0.869 - - - - - - - 0.869 - - ubiquitin conjugating enzyme E2 O [Source:HGNC Symbol;Acc:HGNC:29554]
89. TFAP2A ENSGALG00000012775 294 0.869 - - - - - 0.869 - - - - transcription factor AP-2 alpha [Source:NCBI gene;Acc:395982]
90. MAPK8 ENSGALG00000006109 51 0.869 - - - - - - - 0.869 - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
91. ASB6 ENSGALG00000004378 1080 0.866 - - - - - - 0.866 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
92. LCA5 ENSGALG00000015878 160 0.865 - - - - - - - 0.865 - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
93. PGAP2 ENSGALG00000027762 2583 0.865 - - - - - - 0.865 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
94. ITSN1 ENSGALG00000036677 5727 0.865 - - - - - - 0.865 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
95. ARL16 49 0.865 - - - - - - - 0.865 - - ADP ribosylation factor like GTPase 16, transcript variant X1
96. Sep-03 Sep-03 109 0.865 - - - - - - - - - 0.865
97. FAM183A 242 0.863 - - - - - - 0.863 - - - family with sequence similarity 183 member A, transcript variant 2
98. NCAPG2 ENSGALG00000006525 2319 0.862 - - - - - - 0.862 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
99. USP54 ENSGALG00000005232 2749 0.862 - - - - - - 0.862 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
100. LIPG ENSGALG00000043734 2490 0.86 - - - - - 0.860 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]

There are 381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA