Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NEFL

Gene Name Gene ID Reads Annotation
NEFL ENSGALG00000000314 4883 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]











Genes with expression patterns similar to NEFL

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NEFL ENSGALG00000000314 4883 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
2. NFASC ENSGALG00000031776 4264 4.242 - 0.714 - 0.746 - 0.901 - - 0.949 0.932 neurofascin [Source:NCBI gene;Acc:419824]
3. NEFM ENSGALG00000000317 6992 4.028 - 0.739 - 0.805 0.709 0.832 - - - 0.943 neurofilament medium [Source:NCBI gene;Acc:396206]
4. GPM6A ENSGALG00000043480 2133 3.876 - - 0.743 0.830 0.707 - - - 0.733 0.863 glycoprotein M6A [Source:NCBI gene;Acc:422569]
5. RTN1 ENSGALG00000012006 2438 3.301 - - 0.843 0.703 - - - - 0.814 0.941 reticulon 1 [Source:NCBI gene;Acc:378791]
6. MYT1 ENSGALG00000005932 2017 3.244 - - 0.766 0.715 - - - - 0.822 0.941 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
7. TAGLN3 ENSGALG00000015379 7865 3.224 - 0.747 0.859 0.778 - 0.840 - - - - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
8. MNR2 ENSGALG00000011349 3340 3.196 - - 0.743 0.703 - - - - 0.886 0.864 homeodomain protein
9. GAP43 ENSGALG00000015089 505 2.545 - - 0.725 - - - - - 0.911 0.909 growth associated protein 43 [Source:NCBI gene;Acc:427955]
10. FABP7 ENSGALG00000038933 6780 2.54 - - - - - 0.878 - - 0.818 0.844 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
11. ISL1 ENSGALG00000014884 7666 2.526 - - 0.729 - - - - - 0.899 0.898 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
12. GRM3 ENSGALG00000006576 474 2.495 - - - 0.735 - - - - 0.818 0.942 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
13. SCML4 ENSGALG00000015309 499 2.474 - - 0.708 - - - - - 0.851 0.915 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
14. ECEL1 ENSGALG00000030420 670 2.406 - - 0.705 - - - - - 0.804 0.897 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
15. STMN2 ENSGALG00000039690 989 2.398 - - - 0.724 - - - - 0.732 0.942 stathmin 2 [Source:NCBI gene;Acc:396095]
16. NSG1 ENSGALG00000015010 5829 2.39 - - - - - 0.769 - - 0.790 0.831 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
17. HMP19 ENSGALG00000028602 1604 2.381 - - 0.740 - - - - - 0.749 0.892 Gallus gallus HMP19 protein (HMP19), mRNA. [Source:RefSeq mRNA;Acc:NM_001326465]
18. NHLH1 ENSGALG00000025817 1617 2.345 - - 0.850 - - 0.739 - - - 0.756 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
19. ASTN1 ENSGALG00000004472 855 2.329 - - - - - 0.745 - - 0.735 0.849 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
20. WSCD2 ENSGALG00000004849 477 2.309 - - 0.750 - - 0.805 - - - 0.754 WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
21. EFCAB6 ENSGALG00000014188 139 2.297 - - 0.742 - - - - - 0.731 0.824 EF-hand calcium binding domain 6, transcript variant X3
22. UCH-L1 UCH-L1 12697 2.262 - - 0.738 - - - - - 0.778 0.746
23. ZBTB18 ENSGALG00000010705 3433 2.252 - - - 0.743 - 0.727 - - - 0.782 zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
24. HES5 ENSGALG00000001141 6514 2.209 - - 0.732 - 0.701 0.776 - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
25. DPYSL4 ENSGALG00000010490 3431 2.141 - - 0.703 - - - - - 0.715 0.723 dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
26. EF1A EF1A 2378 1.841 - - - - - - - - 0.905 0.936
27. SIAT8C SIAT8C 178 1.816 - - - - - - - - 0.876 0.940
28. ELAVL4 ENSGALG00000010533 4978 1.709 - - - 0.816 - - - - - 0.893 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
29. SNAP25 ENSGALG00000009003 222 1.672 - - - - - - - - 0.764 0.908 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
30. INA ENSGALG00000028238 208 1.669 - - - - - - - - 0.827 0.842 internexin neuronal intermediate filament protein alpha
31. SYT4 ENSGALG00000042626 384 1.658 - - - - - - - - 0.884 0.774 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
32. SLC10A4 ENSGALG00000033908 300 1.655 - - - - - - - - 0.758 0.897 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
33. MURC 3759 1.65 - - - - - 0.864 - - - 0.786 muscle related coiled-coil protein
34. SLC5A7 ENSGALG00000016804 93 1.65 - - - - - - - - 0.878 0.772 solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
35. MNX1 ENSGALG00000041154 244 1.629 - - - - - - - - 0.803 0.826 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
36. MARCKSL1 ENSGALG00000032335 88728 1.613 - - 0.741 - - 0.872 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
37. RUSC2 ENSGALG00000002371 272 1.603 - - - - - - - - 0.862 0.741 RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
38. STMN4 ENSGALG00000030929 621 1.576 - - - - - - - - 0.764 0.812 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
39. STMN1 ENSGALG00000001475 225354 1.569 - - - - - - - - 0.789 0.780 stathmin 1 [Source:NCBI gene;Acc:396057]
40. PLPPR1 ENSGALG00000015542 3179 1.568 - - - - - - - - 0.718 0.850 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
41. ZIC1 ENSGALG00000040532 6543 1.564 - - 0.704 - - 0.860 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
42. ALCAM ENSGALG00000015348 14283 1.55 - - - - - - - - 0.710 0.840 activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
43. HMGCS1 ENSGALG00000014862 2846 1.534 - - - - - - - - 0.807 0.727 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
44. CDH12 ENSGALG00000012941 223 1.516 - - - - 0.714 - - - - 0.802 cadherin 12, transcript variant X8
45. CXCR4 ENSGALG00000012357 1320 1.516 - - - - - 0.743 - - - 0.773 C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
46. DENND5B 4077 1.515 - - - - - 0.756 - - - 0.759 DENN domain containing 5B, transcript variant X1
47. SHISA3 ENSGALG00000026042 1108 1.506 - - 0.771 0.735 - - - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
48. TMEFF1 ENSGALG00000013212 4222 1.503 - - - - - 0.736 - - - 0.767 transmembrane protein with EGF-like and two follistatin-like domains 1
49. CHGA ENSGALG00000010820 1028 1.502 - - - 0.741 - 0.761 - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
50. GNG2 ENSGALG00000027629 9404 1.502 - - - - - - - - 0.774 0.728 G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
51. TBC1D30 ENSGALG00000009859 994 1.5 - - - - - - - - 0.794 0.706 TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
52. GABRA3 ENSGALG00000007269 985 1.494 - - - - - 0.702 - - 0.792 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
53. MAP2 ENSGALG00000002789 6597 1.492 - - - - - - - - 0.724 0.768 microtubule associated protein 2, transcript variant X33
54. NTM ENSGALG00000001437 584 1.456 - - - - - 0.703 - - 0.753 - neurotrimin [Source:NCBI gene;Acc:395450]
55. NOVA1 ENSGALG00000009850 7584 1.453 - - - - - - - - 0.748 0.705 uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
56. TUBB2B ENSGALG00000012821 41535 1.447 - - - - - 0.702 - - 0.745 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
57. DACH1 ENSGALG00000037015 5648 1.438 - - - - - 0.728 - - - 0.710 dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
58. PROCA1 668 1.433 - - 0.708 - - 0.725 - - - - protein interacting with cyclin A1
59. FAM134B 807 1.41 - - - - - - - - 0.703 0.707 family with sequence similarity 134 member B, transcript variant X3
60. NCAM1 ENSGALG00000007839 19929 1.406 - - - - - 0.702 - - 0.704 - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
61. COL14A1 ENSGALG00000037675 2652 0.933 - - - - - 0.933 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
62. Sep-03 Sep-03 109 0.891 - - - - - - - - - 0.891
63. PCDHA11 58 0.884 - - - - - - - - - 0.884 protocadherin alpha 11
64. MYT1L ENSGALG00000016384 147 0.878 - - - - - - - - - 0.878 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
65. MAP1B ENSGALG00000014999 6288 0.878 - - - - - - - - - 0.878 microtubule associated protein 1B
66. LFNG ENSGALG00000038515 5178 0.872 - - - - - 0.872 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
67. ZBTB16 ENSGALG00000038540 5544 0.862 - - - - - 0.862 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
68. UTS2D UTS2D 2246 0.861 - - - - - - - - - 0.861
69. TMSB10 TMSB10 518 0.858 - - 0.858 - - - - - - -
70. ENSGALG00000022967 ENSGALG00000022967 240 0.852 - - - - - 0.852 - - - -
71. SNAP91 ENSGALG00000015846 148 0.851 - - - - - - - - - 0.851 synaptosome associated protein 91 [Source:NCBI gene;Acc:428635]
72. OPTC ENSGALG00000003554 3698 0.85 - - - - - 0.850 - - - - opticin [Source:NCBI gene;Acc:395130]
73. CKB ENSGALG00000011511 2100 0.847 - - - - - 0.847 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
74. ENSGALG00000021344 ENSGALG00000021344 50 0.843 - - - - - - - 0.843 - -
75. LRRN2 ENSGALG00000000639 73 0.84 - - - - - - - - 0.840 - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
76. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.839 - - - - - - - 0.839 - - homer scaffolding protein 3, transcript variant X4
77. GNG10 ENSGALG00000015683 6905 0.839 - - - - - 0.839 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
78. CSPG5 ENSGALG00000032184 991 0.836 - - - - - 0.836 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
79. CRABP-I ENSGALG00000003193 67258 0.833 - - - - - 0.833 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
80. HOXB2 ENSGALG00000025774 5280 0.829 - - - - - 0.829 - - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
81. NPAS3 ENSGALG00000029022 1950 0.829 - - - - - 0.829 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
82. EML1 1941 0.827 - - - - - - - - - 0.827 echinoderm microtubule associated protein like 1, transcript variant X11
83. PNKD ENSGALG00000022166 595 0.824 - - - - - - - 0.824 - - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
84. MBTD1 ENSGALG00000002954 254 0.822 - - - - - - - 0.822 - - mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
85. AFF4 ENSGALG00000030147 56 0.815 - - - - - - - 0.815 - - AF4/FMR2 family member 4 [Source:HGNC Symbol;Acc:HGNC:17869]
86. FABP5 ENSGALG00000041344 3984 0.813 - - - - - - - - - 0.813 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
87. LOC415324 ENSGALG00000002097 17 0.813 - - - - - - - 0.813 - - epididymal protein-like, transcript variant X16
88. ENSGALG00000013318 ENSGALG00000013318 8 0.813 - - - - - - - 0.813 - -
89. MMD2 ENSGALG00000004530 167 0.811 - - - - - 0.811 - - - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
90. NR4A2 ENSGALG00000012538 29 0.807 - - - - - - - 0.807 - - nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]
91. PTPRZ1 ENSGALG00000040114 3410 0.804 - - - - - 0.804 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
92. CLVS2 ENSGALG00000014853 22 0.801 - - - - - - - - - 0.801 clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
93. HOXB-7 HOXB-7 2066 0.8 - - 0.800 - - - - - - -
94. DLL1 ENSGALG00000011182 1613 0.798 - - - - - 0.798 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
95. FZD3 ENSGALG00000042308 3356 0.797 - - - - - 0.797 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
96. CERCAM ENSGALG00000004986 5158 0.797 - - - - - 0.797 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
97. ELOVL4 ENSGALG00000015876 853 0.795 - - - - - - - - 0.795 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
98. GDI2 ENSGALG00000008169 67151 0.794 - - - - - - - - - 0.794 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
99. CRMP1B CRMP1B 18633 0.793 - - 0.793 - - - - - - -
100. EN1 ENSGALG00000042389 3051 0.793 - - - - - - - - - 0.793 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]

There are 126 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA