Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NDUFS4

Gene Name Gene ID Reads Annotation
NDUFS4 ENSGALG00000028026 25876 NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]











Genes with expression patterns similar to NDUFS4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NDUFS4 ENSGALG00000028026 25876 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
2. ENSGALG00000027854 ENSGALG00000027854 5007 1.671 - - - - 0.954 - - 0.717 - -
3. CDCA7 ENSGALG00000040833 7484 1.66 - - - - 0.942 - - - - 0.718 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
4. TSPO2 ENSGALG00000003212 5141 1.659 - - - - 0.934 - - 0.725 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
5. SRSF7 ENSGALG00000033120 43444 1.651 - - - - 0.800 - 0.851 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
6. DDOST ENSGALG00000010073 18707 1.591 - - - - 0.880 - - - - 0.711 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
7. TMEM9B ENSGALG00000005908 14074 1.576 - - - - - - 0.873 - - 0.703 TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
8. EEF1D 153795 1.572 - - - - 0.837 - 0.735 - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
9. SFSWAP ENSGALG00000002487 9977 0.985 - - - - - - 0.985 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
10. NEK6 ENSGALG00000001118 20333 0.976 - - - - 0.976 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
11. HDAC8 ENSGALG00000004825 12066 0.961 - - - - 0.961 - - - - - histone deacetylase 8, transcript variant X2
12. SH3BGR ENSGALG00000016127 2561 0.956 - - - - 0.956 - - - - - SH3 domain binding glutamate rich protein
13. PSMC1 ENSGALG00000010675 20633 0.956 - - - - 0.956 - - - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
14. SRP19 ENSGALG00000000218 14207 0.954 - - - - 0.954 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
15. DENR ENSGALG00000003795 30805 0.954 - - - - 0.954 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
16. SLMO2 SLMO2 9207 0.954 - - - - 0.954 - - - - -
17. FNDC5 ENSGALG00000003567 3328 0.953 - - - - 0.953 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
18. UTP6 ENSGALG00000003260 4909 0.952 - - - - 0.952 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
19. MYBL2 ENSGALG00000003503 15875 0.951 - - - - 0.951 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
20. KIF11 ENSGALG00000030597 5528 0.951 - - - - 0.951 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
21. MYO9A ENSGALG00000033618 4505 0.951 - - - - 0.951 - - - - - myosin IXA, transcript variant X10
22. SFXN5 ENSGALG00000016094 2678 0.95 - - - - 0.950 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
23. LGALS1 ENSGALG00000012420 13993 0.95 - - - - 0.950 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
24. PSMD3 ENSGALG00000033162 25615 0.949 - - - - 0.949 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
25. SAP30 ENSGALG00000036252 2032 0.949 - - - - 0.949 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
26. RBM6 ENSGALG00000035578 1690 0.949 - - - - 0.949 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
27. SYNE1 ENSGALG00000013505 2324 0.949 - - - - 0.949 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
28. LZIC ENSGALG00000002616 9052 0.948 - - - - 0.948 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
29. YARS ENSGALG00000003563 11093 0.948 - - - - 0.948 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
30. ETS1 ENSGALG00000001143 7284 0.948 - - - - 0.948 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
31. CEP78 ENSGALG00000015179 5227 0.948 - - - - 0.948 - - - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
32. MEF2BNB MEF2BNB 5578 0.948 - - - - 0.948 - - - - -
33. EDNRA ENSGALG00000010013 2472 0.947 - - - - 0.947 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
34. RHOT1 ENSGALG00000003397 5149 0.947 - - - - 0.947 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
35. STARD3NL ENSGALG00000033038 4851 0.947 - - - - 0.947 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
36. PITHD1 ENSGALG00000003986 11470 0.947 - - - - 0.947 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
37. WDR92 ENSGALG00000008760 3934 0.947 - - - - 0.947 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
38. ENSGALG00000006569 ENSGALG00000006569 2169 0.947 - - - - 0.947 - - - - -
39. GTF2H1 ENSGALG00000042340 1553 0.947 - - - - 0.947 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
40. PRDM4 ENSGALG00000012619 876 0.946 - - - - 0.946 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
41. HSF2 ENSGALG00000038420 5259 0.946 - - - - 0.946 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
42. RAMP3 ENSGALG00000037246 1187 0.946 - - - - 0.946 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
43. SMG7 ENSGALG00000004667 707 0.946 - - - - 0.946 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
44. BRF1 ENSGALG00000011705 3406 0.946 - - - - 0.946 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
45. BHMT ENSGALG00000004518 4700 0.946 - - - - 0.946 - - - - - betaine--homocysteine S-methyltransferase
46. MED8 ENSGALG00000009993 3095 0.946 - - - - 0.946 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
47. ANKRD9 ENSGALG00000011376 525 0.946 - - - - 0.946 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
48. FUNDC2 ENSGALG00000029585 9334 0.946 - - - - 0.946 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
49. PHTF1 ENSGALG00000001845 3276 0.946 - - - - 0.946 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
50. C9orf85 ENSGALG00000026001 4110 0.945 - - - - 0.945 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
51. SDCBP ENSGALG00000015436 1228 0.945 - - - - 0.945 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
52. LMAN2 ENSGALG00000033232 11740 0.945 - - - - 0.945 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
53. TIMMDC1 ENSGALG00000024480 9337 0.945 - - - - 0.945 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
54. PREP2 PREP2 238 0.945 - - - - 0.945 - - - - -
55. NDUFV1 ENSGALG00000042809 6222 0.945 - - - - 0.945 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
56. ASAP2 ENSGALG00000016419 1393 0.945 - - - - 0.945 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
57. PTK2B ENSGALG00000016564 406 0.944 - - - - 0.944 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
58. DGKZ ENSGALG00000008380 5389 0.944 - - - - 0.944 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
59. RBM34 ENSGALG00000029915 5618 0.943 - - - - 0.943 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
60. HARS ENSGALG00000035080 11602 0.943 - - - - 0.943 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
61. MED21 ENSGALG00000027435 5766 0.943 - - - - 0.943 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
62. MARC1 ENSGALG00000009453 5675 0.943 - - - - 0.943 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
63. LOC426385 ENSGALG00000026301 2703 0.942 - - - - 0.942 - - - - - serine/threonine kinase 35-like, transcript variant X2
64. DLD ENSGALG00000007931 11011 0.942 - - - - 0.942 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
65. TMF1 ENSGALG00000013408 3344 0.942 - - - - 0.942 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
66. RAD54B ENSGALG00000043597 1699 0.942 - - - - 0.942 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
67. CDKN1B ENSGALG00000022980 4606 0.942 - - - - 0.942 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
68. PSMG3 ENSGALG00000004203 11240 0.941 - - - - 0.941 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
69. UBE2D3 ENSGALG00000012311 39831 0.941 - - - - 0.941 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
70. BAHD1 ENSGALG00000033675 1779 0.941 - - - - 0.941 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
71. DLL1 ENSGALG00000011182 1613 0.94 - - - - 0.940 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
72. COQ5 ENSGALG00000007185 5614 0.94 - - - - 0.940 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
73. SNX14 ENSGALG00000015831 2554 0.94 - - - - 0.940 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
74. MRPL16 ENSGALG00000029419 8033 0.94 - - - - 0.940 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
75. IARS2 ENSGALG00000009566 4599 0.939 - - - - 0.939 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
76. NUP88 ENSGALG00000032280 9847 0.938 - - - - 0.938 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
77. RALGDS ENSGALG00000003412 4478 0.938 - - - - 0.938 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
78. PBRM1 ENSGALG00000037455 6450 0.937 - - - - 0.937 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
79. UPF3B ENSGALG00000008618 12350 0.936 - - - - 0.936 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
80. ZYX ENSGALG00000014688 8686 0.935 - - - - 0.935 - - - - - zyxin [Source:NCBI gene;Acc:418300]
81. PRCC ENSGALG00000040696 9346 0.935 - - - - 0.935 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
82. SPEN ENSGALG00000036932 9688 0.935 - - - - 0.935 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
83. GATC ENSGALG00000007195 8610 0.935 - - - - 0.935 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
84. DNAJC9 ENSGALG00000002701 19249 0.934 - - - - 0.934 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
85. ACAT2 ENSGALG00000011659 12825 0.934 - - - - 0.934 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
86. RPL22 ENSGALG00000000719 74238 0.934 - - - - 0.934 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
87. SPRED1 ENSGALG00000028203 6520 0.934 - - - - 0.934 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
88. ZDHHC6 ENSGALG00000008870 16575 0.931 - - - - 0.931 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
89. TM9SF3 ENSGALG00000005534 15290 0.931 - - - - 0.931 - - - - - transmembrane 9 superfamily member 3
90. SLC30A4 ENSGALG00000005703 5696 0.93 - - - - 0.930 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
91. GSPT1 15580 0.93 - - - - 0.930 - - - - - G1 to S phase transition 1, transcript variant X1
92. CDH3 5050 0.93 - - - - 0.930 - - - - - cadherin 3
93. SEPHS1 ENSGALG00000014575 10701 0.929 - - - - 0.929 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
94. CDCA4 ENSGALG00000011692 10381 0.929 - - - - 0.929 - - - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
95. LGMN ENSGALG00000010811 7401 0.929 - - - - 0.929 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
96. SRGAP1 ENSGALG00000009825 6753 0.928 - - - - 0.928 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
97. Mar-05 Mar-05 6330 0.928 - - - - 0.928 - - - - -
98. VMA21 ENSGALG00000009065 6432 0.928 - - - - 0.928 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
99. WNK2 ENSGALG00000038850 4712 0.926 - - - - 0.926 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
100. GSTO1 ENSGALG00000008409 7561 0.924 - - - - 0.924 - - - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]

There are 211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA