Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for NDUFB3

Gene Name Gene ID Reads Annotation
NDUFB3 ENSGALG00000008239 15511 NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]











Genes with expression patterns similar to NDUFB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NDUFB3 ENSGALG00000008239 15511 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
2. CHMP3 ENSGALG00000015805 11581 1.849 - - - - - - 0.882 0.967 - - charged multivesicular body protein 3
3. PGAM5 ENSGALG00000002137 7700 1.818 - - - - - - 0.872 0.946 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
4. PFDN1 ENSGALG00000000946 18822 1.781 - - - - - - 0.899 0.882 - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
5. PPCS ENSGALG00000004882 5759 1.746 - - - - - - 0.811 0.935 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
6. SMDT1 ENSGALG00000011897 9360 1.743 - - - - - - 0.802 0.941 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
7. CNOT8 ENSGALG00000003950 8271 1.735 - - - - - - 0.885 0.850 - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
8. FXR1 ENSGALG00000008864 10250 1.73 - - - - - - 0.780 0.950 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
9. CHMP6 ENSGALG00000026428 18026 1.729 - - - - - - 0.776 0.953 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
10. CHTF8 ENSGALG00000000632 7230 1.704 - - - - - - 0.898 - - 0.806 chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
11. NET1 ENSGALG00000008437 9850 1.687 - - - - - - - 0.910 - 0.777 neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
12. SNAI2 ENSGALG00000030902 8201 1.681 - - - - - - 0.748 0.933 - - snail family transcriptional repressor 2
13. MRPL20 ENSGALG00000001542 28764 1.677 - - - - - - 0.769 0.908 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
14. ERGIC2 ENSGALG00000007183 12870 1.675 - - - - - - 0.755 0.920 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
15. SNAP29 ENSGALG00000040128 3581 1.672 - - - - - - 0.748 0.924 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
16. MARC1 ENSGALG00000009453 5675 1.666 - - - - - - 0.755 0.911 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
17. HNRNPD ENSGALG00000011184 10686 1.664 - - - - - - 0.761 0.903 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
18. DNAJA1 ENSGALG00000023066 3820 1.659 - - - - - - - 0.892 - 0.767 DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
19. TRIM24 ENSGALG00000012823 2725 1.658 - - - - - - - 0.920 - 0.738 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
20. RP9 ENSGALG00000035453 1186 1.657 - - - - - - - 0.857 - 0.800 retinitis pigmentosa 9 (autosomal dominant)
21. TRMT44 ENSGALG00000015594 1490 1.644 - - - - - - - 0.881 - 0.763 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
22. SLC35E3 ENSGALG00000009940 8560 1.644 - - - - - - 0.729 0.915 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
23. C5orf24 ENSGALG00000006371 1573 1.637 - - - - - - - 0.849 - 0.788 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
24. NDUFAF1 ENSGALG00000008587 14779 1.633 - - - - - - 0.702 0.931 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
25. DLD ENSGALG00000007931 11011 1.633 - - - - - - 0.784 0.849 - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
26. gga-mir-1772 ENSGALG00000025300 2892 1.63 - - - - - - 0.740 0.890 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
27. GTF2A2 ENSGALG00000003793 5957 1.621 - - - - - - 0.713 0.908 - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
28. RUVBL1 ENSGALG00000005931 9379 1.613 - - - - - - 0.745 0.868 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
29. PCGF6 ENSGALG00000008230 1690 1.606 - - - - - - 0.810 - - 0.796 polycomb group ring finger 6 [Source:HGNC Symbol;Acc:HGNC:21156]
30. APOOL ENSGALG00000006978 1953 1.606 - - - - - - - 0.866 - 0.740 apolipoprotein O like [Source:NCBI gene;Acc:422271]
31. Mar-05 Mar-05 6330 1.602 - - - - - - 0.706 0.896 - -
32. MCFD2 ENSGALG00000010017 8905 1.591 - - - - - - 0.825 - - 0.766 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
33. BCAP29 ENSGALG00000008009 8519 1.585 - - - - - - 0.709 0.876 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
34. LIMD1 ENSGALG00000035623 7282 1.581 - - - - - - 0.730 0.851 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
35. NAA38 ENSGALG00000045783 11229 1.56 - - - - - - 0.748 0.812 - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
36. EXOSC9 ENSGALG00000011884 3403 1.556 - - - - - - 0.813 - - 0.743 exosome component 9 [Source:NCBI gene;Acc:619530]
37. UTP6 ENSGALG00000003260 4909 1.554 - - - - - - 0.700 0.854 - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
38. OAF ENSGALG00000006715 12518 1.549 - - - - - - 0.718 0.831 - - out at first homolog [Source:NCBI gene;Acc:395161]
39. STX6 3297 1.547 - - - - - - 0.747 - - 0.800 syntaxin 6
40. MRPL15 ENSGALG00000041086 16820 1.512 - - - - - - 0.717 - - 0.795 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
41. MED28 ENSGALG00000007138 7686 1.511 - - - - - - 0.701 0.810 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
42. MED17 ENSGALG00000017218 5821 1.499 - - - - - - 0.773 - - 0.726 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
43. GRAMD3 1685 1.493 - - - - - - 0.721 - - 0.772 GRAM domain containing 3, transcript variant X9
44. SART3 ENSGALG00000039472 4948 1.457 - - - - - - 0.727 0.730 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
45. IREB2 ENSGALG00000035462 10659 1.444 - - - - - - 0.718 - - 0.726 iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
46. CKAP2 ENSGALG00000017025 25020 0.958 - - - - - - - 0.958 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
47. MRPL18 ENSGALG00000011625 7855 0.954 - - - - - - - 0.954 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
48. TSC22D2 ENSGALG00000027591 6594 0.954 - - - - - - - 0.954 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
49. MRPS23 ENSGALG00000005559 10360 0.953 - - - - - - - 0.953 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
50. UBE2D1 ENSGALG00000021213 5876 0.952 - - - - - - - 0.952 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
51. BID ENSGALG00000013039 12427 0.95 - - - - - - - 0.950 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
52. SCO1 ENSGALG00000030475 7304 0.95 - - - - - - - 0.950 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
53. MAPK9 ENSGALG00000039099 5467 0.947 - - - - - - - 0.947 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
54. CAMSAP2 ENSGALG00000002145 6109 0.947 - - - - - - - 0.947 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
55. FBXO33 ENSGALG00000010192 2917 0.943 - - - - - - - 0.943 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
56. MED24 ENSGALG00000013506 5403 0.94 - - - - - - - 0.940 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
57. EFTUD2 ENSGALG00000000988 17913 0.937 - - - - - - - 0.937 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
58. LATS2 4776 0.936 - - - - - - - 0.936 - - large tumor suppressor kinase 2
59. AHCTF1 ENSGALG00000010630 4809 0.934 - - - - - - - 0.934 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
60. RDM1 ENSGALG00000000243 3388 0.934 - - - - - - - 0.934 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
61. CTSC ENSGALG00000017239 7651 0.933 - - - - - - - 0.933 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
62. FGFR1OP ENSGALG00000011423 2418 0.932 - - - - - - - 0.932 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
63. ENSGALG00000003150 ENSGALG00000003150 10001 0.931 - - - - - - - 0.931 - -
64. NAE1 ENSGALG00000038957 13777 0.931 - - - - - - - 0.931 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
65. BAG3 ENSGALG00000009433 6152 0.93 - - - - - - - 0.930 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
66. GFPT1 ENSGALG00000036391 14025 0.93 - - - - - - - 0.930 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
67. CEP170 ENSGALG00000010733 4177 0.926 - - - - - - - 0.926 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
68. TCEA1 ENSGALG00000015274 2706 0.925 - - - - - - - 0.925 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
69. VGLL4 ENSGALG00000004937 3762 0.924 - - - - - - - 0.924 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
70. BCLAF1 ENSGALG00000013935 7596 0.923 - - - - - - - 0.923 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
71. CDC42BPA ENSGALG00000009158 3926 0.922 - - - - - - - 0.922 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
72. ZNF326 ENSGALG00000006113 15141 0.922 - - - - - - - 0.922 - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
73. MAST2 ENSGALG00000010313 2975 0.922 - - - - - - - 0.922 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
74. MTERFD1 MTERFD1 3640 0.922 - - - - - - - 0.922 - -
75. RNF214 ENSGALG00000036993 3729 0.922 - - - - - - - 0.922 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
76. ARFRP1 ENSGALG00000006101 3743 0.922 - - - - - - - 0.922 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
77. LIG3 ENSGALG00000002288 7198 0.921 - - - - - - - 0.921 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
78. KDM4A ENSGALG00000010074 7219 0.921 - - - - - - - 0.921 - - lysine demethylase 4A
79. CENPH ENSGALG00000014788 10601 0.92 - - - - - - - 0.920 - - centromere protein H [Source:NCBI gene;Acc:395316]
80. SRP72 ENSGALG00000011403 13666 0.918 - - - - - - - 0.918 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
81. PEO1 PEO1 6747 0.917 - - - - - - - 0.917 - -
82. VCAN ENSGALG00000015624 11489 0.916 - - - - - - - 0.916 - - versican [Source:NCBI gene;Acc:395565]
83. GLG1 ENSGALG00000039818 6221 0.915 - - - - - - - 0.915 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
84. CCDC61 ENSGALG00000006714 8066 0.915 - - - - - - - 0.915 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
85. ATG4C ENSGALG00000010985 6102 0.915 - - - - - - - 0.915 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
86. XPO6 ENSGALG00000035360 7042 0.913 - - - - - - - 0.913 - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
87. BRCC3 ENSGALG00000005383 4844 0.913 - - - - - - - 0.913 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
88. HPCAL1 ENSGALG00000016443 6633 0.913 - - - - - - - 0.913 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
89. SMIM12 ENSGALG00000030261 5860 0.912 - - - - - - - 0.912 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
90. STAG2 ENSGALG00000008482 13629 0.912 - - - - - - - 0.912 - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
91. NDUFS6 ENSGALG00000013191 15874 0.911 - - - - - - - 0.911 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
92. KHDRBS1 ENSGALG00000003272 4249 0.91 - - - - - - - 0.910 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
93. TMEM59 ENSGALG00000010746 4669 0.91 - - - - - - - 0.910 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
94. MLLT10 ENSGALG00000007928 4022 0.91 - - - - - - - 0.910 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
95. WASH1 WASH1 3240 0.91 - - - - - - - 0.910 - -
96. ECHS1 ENSGALG00000024271 9364 0.909 - - - - - - - 0.909 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
97. DPYD ENSGALG00000005509 4115 0.909 - - - - - - - 0.909 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
98. SLC25A1 ENSGALG00000041760 4744 0.909 - - - - - - - 0.909 - - solute carrier family 25 member 1, transcript variant X2
99. ACSL1 ENSGALG00000010628 2560 0.908 - - - - - - - 0.908 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
100. PWWP2A ENSGALG00000038202 3686 0.908 - - - - - - - 0.908 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]

There are 936 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA