Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for NDRG3

Gene Name Gene ID Reads Annotation
NDRG3 ENSGALG00000001492 5919 NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]











Genes with expression patterns similar to NDRG3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NDRG3 ENSGALG00000001492 5919 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
2. RCAN3 ENSGALG00000004282 7778 1.74 - - - - - - 0.871 0.869 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
3. RNASEH1 ENSGALG00000016389 2694 1.717 - - - - - - 0.794 0.923 - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
4. PKN3 532 1.693 - - - - - - 0.850 0.843 - - protein kinase N3, transcript variant X2
5. AIP ENSGALG00000040247 4166 1.683 - - - - - - 0.796 0.887 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
6. BIVM ENSGALG00000016861 3987 1.633 - - - - - - 0.819 0.814 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
7. UBR4 ENSGALG00000030563 5225 1.536 - - - - - - 0.775 0.761 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
8. CCNK ENSGALG00000011138 6416 1.517 - - - - - - 0.806 0.711 - - cyclin K [Source:NCBI gene;Acc:423446]
9. RNF185 ENSGALG00000006960 5428 1.51 - - - - - - 0.740 0.770 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
10. PRPF40A ENSGALG00000012526 7724 1.503 - - - - - - 0.724 0.779 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
11. COQ5 ENSGALG00000007185 5614 1.474 - - - - - - 0.768 - - 0.706 coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
12. ITFG1 ENSGALG00000004049 2934 0.922 - - - - - - - 0.922 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
13. ENTPD4 ENSGALG00000000390 1394 0.921 - - - - - - - 0.921 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
14. PPP2R3A ENSGALG00000034512 1091 0.914 - - - - - - - 0.914 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
15. PDHX ENSGALG00000033753 2799 0.912 - - - - - - 0.912 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
16. SLC19A1 ENSGALG00000030511 1397 0.909 - - - - - - - 0.909 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
17. NPAT ENSGALG00000017162 1574 0.906 - - - - - - - 0.906 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
18. MMP15 ENSGALG00000038758 49988 0.903 - - - - - - - 0.903 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
19. USP28 ENSGALG00000006969 2645 0.898 - - - - - - - 0.898 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
20. TICAM1 ENSGALG00000026850 723 0.897 - - - - - - - 0.897 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
21. SMG8 ENSGALG00000005093 5557 0.895 - - - - - - - 0.895 - - SMG8 nonsense mediated mRNA decay factor
22. SPATA2 ENSGALG00000008026 2040 0.895 - - - - - - - 0.895 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
23. TAF1A ENSGALG00000009441 2431 0.894 - - - - - - - 0.894 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
24. FGFR1 ENSGALG00000039786 4480 0.894 - - - - - - - 0.894 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
25. AGRN ENSGALG00000039193 8135 0.893 - - - - - - - 0.893 - - agrin [Source:NCBI gene;Acc:396538]
26. DOK5 ENSGALG00000007786 1732 0.893 - - - - - - - 0.893 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
27. WIPI1 ENSGALG00000004215 3359 0.893 - - - - - - 0.893 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
28. WDR47 ENSGALG00000002129 2624 0.892 - - - - - - 0.892 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
29. BACE2 ENSGALG00000034932 1570 0.892 - - - - - - - 0.892 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
30. TPM3 ENSGALG00000013537 934 0.891 - - - - - - - 0.891 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
31. COPS8 ENSGALG00000033385 10166 0.89 - - - - - - 0.890 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
32. URM1 ENSGALG00000004971 17880 0.89 - - - - - - 0.890 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
33. MTUS1 ENSGALG00000013615 1040 0.89 - - - - - - - 0.890 - - microtubule associated tumor suppressor 1, transcript variant X4
34. IFT74 ENSGALG00000001801 1932 0.888 - - - - - - 0.888 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
35. MTIF2 ENSGALG00000031265 2366 0.887 - - - - - - - 0.887 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
36. PHF2 ENSGALG00000039208 2003 0.886 - - - - - - - 0.886 - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
37. SELM SELM 6366 0.884 - - - - - - 0.884 - - -
38. FBXO7 ENSGALG00000012569 4124 0.884 - - - - - - - 0.884 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
39. EML1 1941 0.883 - - - - - - - 0.883 - - echinoderm microtubule associated protein like 1, transcript variant X11
40. UBN1 ENSGALG00000031416 2848 0.883 - - - - - - - 0.883 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
41. PAPD7 ENSGALG00000013061 2031 0.883 - - - - - - 0.883 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
42. KLF6 ENSGALG00000033178 679 0.882 - - - - - - - 0.882 - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
43. ATP1B3 ENSGALG00000002764 1890 0.882 - - - - - - - 0.882 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
44. LONP1 ENSGALG00000040492 7133 0.882 - - - - - - 0.882 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
45. LRIG3 ENSGALG00000009755 6655 0.88 - - - - - - - 0.880 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
46. LIMS1 ENSGALG00000029970 7244 0.88 - - - - - - - 0.880 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
47. USP54 ENSGALG00000005232 2749 0.878 - - - - - - 0.878 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
48. CCNL2 ENSGALG00000001551 2620 0.878 - - - - - - - 0.878 - - cyclin L2 [Source:NCBI gene;Acc:395124]
49. PARL ENSGALG00000002315 15943 0.878 - - - - - - 0.878 - - - presenilin associated rhomboid like
50. NCAPH ENSGALG00000032270 2103 0.877 - - - - - - - 0.877 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
51. BRCA1 ENSGALG00000002781 2052 0.877 - - - - - - - 0.877 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
52. SRP72 ENSGALG00000011403 13666 0.877 - - - - - - 0.877 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
53. RASA3 ENSGALG00000016817 2146 0.876 - - - - - - - 0.876 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
54. RBL1 ENSGALG00000001332 2568 0.876 - - - - - - 0.876 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
55. ZBTB18 ENSGALG00000010705 3433 0.875 - - - - - - - 0.875 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
56. BUD13 ENSGALG00000025882 1800 0.875 - - - - - - - 0.875 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
57. RIMKLB ENSGALG00000040184 281 0.874 - - - - - - - 0.874 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
58. PEX16 ENSGALG00000008421 3684 0.874 - - - - - - 0.874 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
59. SPATA2L ENSGALG00000044991 463 0.873 - - - - - - - 0.873 - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
60. G2E3 ENSGALG00000009907 1754 0.873 - - - - - - - 0.873 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
61. HDAC1 ENSGALG00000003297 3528 0.872 - - - - - - - 0.872 - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
62. KIAA1009 KIAA1009 1261 0.872 - - - - - - - 0.872 - -
63. ANGPTL1 ENSGALG00000004290 1922 0.872 - - - - - - - 0.872 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
64. APBB2 ENSGALG00000014262 569 0.872 - - - - - - - 0.872 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
65. CLCN5 ENSGALG00000007234 1143 0.871 - - - - - - - 0.871 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
66. SLC25A28 ENSGALG00000007479 4902 0.871 - - - - - - - 0.871 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
67. HAGHL ENSGALG00000021040 1568 0.871 - - - - - - - 0.871 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
68. PDZD8 ENSGALG00000029095 1068 0.87 - - - - - - - 0.870 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
69. HOOK1 ENSGALG00000010889 1007 0.87 - - - - - - - 0.870 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
70. PGAP2 ENSGALG00000027762 2583 0.87 - - - - - - 0.870 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
71. SPG11 ENSGALG00000008180 1890 0.87 - - - - - - 0.870 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
72. GKAP1 ENSGALG00000012586 2908 0.87 - - - - - - - 0.870 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
73. ZNF750 ENSGALG00000001518 151 0.87 - - - - - - - 0.870 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
74. ABHD12B ENSGALG00000020342 511 0.869 - - - - - - - 0.869 - - abhydrolase domain containing 12B, transcript variant X2
75. TM2D3 ENSGALG00000026271 2566 0.868 - - - - - - 0.868 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
76. EPGN ENSGALG00000010859 187 0.868 - - - - - - - 0.868 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
77. CREPT CREPT 17142 0.868 - - - - - - - 0.868 - -
78. PCYOX1 ENSGALG00000013878 2200 0.867 - - - - - - - 0.867 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
79. EIF3I ENSGALG00000003337 28832 0.867 - - - - - - 0.867 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
80. KIF21B ENSGALG00000034347 4144 0.865 - - - - - - - 0.865 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
81. TTC38 ENSGALG00000014551 1135 0.864 - - - - - - - 0.864 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
82. PECR ENSGALG00000011497 1714 0.864 - - - - - - - 0.864 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
83. TMEM161A ENSGALG00000025809 2813 0.863 - - - - - - - 0.863 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
84. TTF1 4214 0.863 - - - - - - - 0.863 - - transcription termination factor 1
85. CMSS1 ENSGALG00000015267 2954 0.863 - - - - - - 0.863 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
86. NRG1 ENSGALG00000015422 196 0.863 - - - - - - - 0.863 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
87. NT5C3B ENSGALG00000003651 5190 0.862 - - - - - - - 0.862 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
88. ENSGALG00000002852 ENSGALG00000002852 2687 0.862 - - - - - - 0.862 - - -
89. DMA DMA 1012 0.862 - - - - - - - 0.862 - -
90. GLT8D1 ENSGALG00000001642 4232 0.862 - - - - - - - 0.862 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
91. NPHP4 ENSGALG00000000966 1698 0.862 - - - - - - 0.862 - - - nephrocystin 4, transcript variant X5
92. SPAG9 ENSGALG00000034001 2314 0.862 - - - - - - 0.862 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
93. SUN1 ENSGALG00000003781 3442 0.862 - - - - - - 0.862 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
94. KANK1 ENSGALG00000010158 3780 0.861 - - - - - - 0.861 - - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
95. TXNDC11 ENSGALG00000003154 2224 0.86 - - - - - - - 0.860 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
96. RBM46 ENSGALG00000009278 98 0.86 - - - - - - - 0.860 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
97. DIEXF ENSGALG00000009887 4782 0.86 - - - - - - 0.860 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
98. PAIP1 ENSGALG00000014867 202 0.859 - - - - - - - 0.859 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
99. GGCT ENSGALG00000030552 3446 0.858 - - - - - - 0.858 - - - gamma-glutamylcyclotransferase
100. TAF5 ENSGALG00000008241 5227 0.858 - - - - - - - 0.858 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]

There are 390 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA