Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NDE1

Gene Name Gene ID Reads Annotation
NDE1 ENSGALG00000032590 3277 nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]











Genes with expression patterns similar to NDE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NDE1 ENSGALG00000032590 3277 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]
2. HYPK ENSGALG00000013916 4900 1.537 - - - - - - 0.744 0.793 - - huntingtin interacting protein K [Source:NCBI gene;Acc:770307]
3. CLN8 ENSGALG00000039606 4209 1.474 - - - - - - 0.708 0.766 - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
4. SETD3 ENSGALG00000034802 4125 0.858 - - - - - - 0.858 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
5. SRSF1 ENSGALG00000005525 4376 0.828 - - - - - - 0.828 - - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
6. NR2C1 ENSGALG00000011327 5109 0.821 - - - - - - 0.821 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
7. UBE2Q2 3861 0.818 - - - - - - 0.818 - - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
8. LASP-2 LASP-2 4415 0.813 - - - - - - 0.813 - - -
9. SECISBP2 ENSGALG00000010694 6990 0.808 - - - - - - 0.808 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
10. DAD1 ENSGALG00000035626 32604 0.801 - - - - - - 0.801 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
11. DCUN1D1 ENSGALG00000008807 6545 0.8 - - - - - - 0.800 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
12. MRPL40 ENSGALG00000001587 20893 0.797 - - - - - - 0.797 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
13. ANXA8 ENSGALG00000005956 479 0.797 - - - - - - 0.797 - - - annexin A8, transcript variant X1
14. BLCAP ENSGALG00000027126 12200 0.795 - - - - - - 0.795 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
15. MAK16 ENSGALG00000001663 7455 0.794 - - - - - - 0.794 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
16. IFT46 ENSGALG00000007438 4094 0.793 - - - - - - - 0.793 - - intraflagellar transport 46, transcript variant X1
17. QARS ENSGALG00000029980 4207 0.792 - - - - - - 0.792 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
18. ME1 ENSGALG00000015849 1169 0.791 - - - 0.791 - - - - - - malic enzyme 1 [Source:NCBI gene;Acc:374189]
19. DDX49 ENSGALG00000003130 5216 0.791 - - - - - - - 0.791 - - DEAD-box helicase 49 [Source:NCBI gene;Acc:420116]
20. TANGO2 ENSGALG00000002056 1971 0.79 - - - - - - - 0.790 - - transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
21. NOP58 ENSGALG00000008454 34630 0.788 - - - - - - 0.788 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
22. TIPRL ENSGALG00000015246 7875 0.787 - - - - - - - 0.787 - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
23. HOXB-7 HOXB-7 2066 0.787 - - - - - - 0.787 - - -
24. MVD ENSGALG00000007267 4374 0.786 - - - - - - - 0.786 - - mevalonate diphosphate decarboxylase [Source:HGNC Symbol;Acc:HGNC:7529]
25. MCM3AP ENSGALG00000004363 3247 0.784 - - - - - - 0.784 - - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
26. CDT1 ENSGALG00000013784 6801 0.781 - - - - - - - 0.781 - - chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]
27. C1H12ORF4 2696 0.781 - - - - - - 0.781 - - - chromosome 1 open reading frame, human C12orf4
28. NDUFC2 ENSGALG00000029172 26136 0.781 - - - - - - 0.781 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
29. AKT1 ENSGALG00000011620 4089 0.78 - - - - - - - 0.780 - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
30. NOP16 ENSGALG00000003355 10692 0.779 - - - - - - 0.779 - - - NOP16 nucleolar protein
31. WHAMM ENSGALG00000006002 1678 0.779 - - - - - - 0.779 - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
32. MCFD2 ENSGALG00000010017 8905 0.779 - - - - - - 0.779 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
33. RNF144A ENSGALG00000028709 2855 0.779 - - - - - - - - - 0.779 ring finger protein 144A, transcript variant X1
34. SMCR8 ENSGALG00000024082 44 0.779 - - - 0.779 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
35. RAB21 ENSGALG00000010183 7718 0.779 - - - - - - 0.779 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
36. TNFAIP2 ENSGALG00000011446 32 0.775 - - - 0.775 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
37. RPA3 ENSGALG00000010700 6212 0.773 - - - - - - 0.773 - - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
38. ZDHHC8 ENSGALG00000002124 35 0.771 - - - 0.771 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
39. AIFM1 ENSGALG00000004003 10451 0.771 - - - - - - - 0.771 - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
40. PEX3 ENSGALG00000013777 3158 0.77 - - - - - - - 0.770 - - peroxisomal biogenesis factor 3
41. CP ENSGALG00000030773 119 0.77 - - - 0.770 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
42. HTR1E ENSGALG00000015826 11 0.769 - - - 0.769 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
43. OXGR1 ENSGALG00000016891 13 0.769 - - - 0.769 - - - - - - oxoglutarate receptor 1
44. ZPBP2 ENSGALG00000013484 14 0.769 - - - 0.769 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
45. ODZ3 ODZ3 2213 0.768 - - - - - - - 0.768 - -
46. NUP160 ENSGALG00000043074 46 0.768 - - - 0.768 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
47. DLD ENSGALG00000007931 11011 0.768 - - - - - - 0.768 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
48. ATP5J 14451 0.767 - - - - - - - 0.767 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
49. E2F5 ENSGALG00000038915 3562 0.767 - - - - - - - - 0.767 - E2F transcription factor 5 [Source:NCBI gene;Acc:420206]
50. ZNF598 ENSGALG00000005598 8270 0.767 - - - - - - 0.767 - - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
51. VEPH1 ENSGALG00000009682 51 0.767 - - - 0.767 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
52. ENSGALG00000028652 ENSGALG00000028652 65 0.766 - - - 0.766 - - - - - -
53. RFESD ENSGALG00000014673 198 0.765 - - - 0.765 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
54. gga-mir-454 ENSGALG00000033526 22 0.764 - - - 0.764 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
55. OTUD7B ENSGALG00000013348 38 0.764 - - - 0.764 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
56. TRAF2 ENSGALG00000042838 24 0.763 - - - 0.763 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
57. KCNK1 ENSGALG00000011005 1643 0.763 - - - - - - 0.763 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
58. MTERFD3 MTERFD3 20 0.763 - - - 0.763 - - - - - -
59. FAM47E-STBD1 FAM47E-STBD1 1148 0.762 - - - - - - 0.762 - - -
60. CALCOCO2 ENSGALG00000001525 3121 0.762 - - - - - - - 0.762 - - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
61. Mar-06 Mar-06 1218 0.761 - - - - - - 0.761 - - -
62. TOLLIP ENSGALG00000006697 917 0.761 - - - - - - 0.761 - - - toll interacting protein [Source:NCBI gene;Acc:423099]
63. ADSS ENSGALG00000010702 7207 0.761 - - - - - - - 0.761 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
64. KLHL18 ENSGALG00000005582 3053 0.759 - - - - - - 0.759 - - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
65. SLC30A5 ENSGALG00000014787 5573 0.758 - - - - - - 0.758 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
66. COG5 ENSGALG00000042764 4205 0.757 - - - - - - 0.757 - - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
67. SFXN1 ENSGALG00000033956 2713 0.757 - - - - - - 0.757 - - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
68. PTTG1 17936 0.757 - - - - - - 0.757 - - - pituitary tumor-transforming 1, transcript variant X1
69. ACOX2 ENSGALG00000007132 47 0.756 - - - 0.756 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
70. KIAA0020 KIAA0020 14353 0.755 - - - - - - 0.755 - - -
71. TAF7 4725 0.755 - - - - - - 0.755 - - - TATA-box binding protein associated factor 7, transcript variant X1
72. GNB1L ENSGALG00000001925 1981 0.754 - - - - - - 0.754 - - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
73. NPAS3 ENSGALG00000029022 1950 0.753 - - - - - - - - 0.753 - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
74. BEGAIN ENSGALG00000011236 35 0.752 - - - 0.752 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
75. RGS16 ENSGALG00000033535 139 0.751 - - - 0.751 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
76. RHBDF1 ENSGALG00000007434 2359 0.751 - - - - - - - 0.751 - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
77. PXDC1 ENSGALG00000012814 1163 0.751 - - - - - - - 0.751 - - PX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21361]
78. TM9SF2L ENSGALG00000006487 5566 0.75 - - - - - - 0.750 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
79. GINS2 ENSGALG00000033063 1669 0.747 - - - - - - 0.747 - - - GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]
80. RPAIN ENSGALG00000001666 2676 0.747 - - - - - - 0.747 - - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
81. MRPS2 ENSGALG00000026303 12124 0.747 - - - - - - 0.747 - - - mitochondrial ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:14495]
82. PTGS2 ENSGALG00000033635 426 0.746 - - - - - - 0.746 - - - prostaglandin-endoperoxide synthase 2 [Source:NCBI gene;Acc:396451]
83. NRIP1 ENSGALG00000015681 10711 0.746 - - - - - - 0.746 - - - nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]
84. PPP2R5D ENSGALG00000040005 6804 0.744 - - - - - - 0.744 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
85. PPP2R2A ENSGALG00000000235 4263 0.744 - - - - - - 0.744 - - - protein phosphatase 2 regulatory subunit Balpha [Source:NCBI gene;Acc:419523]
86. ENSGALG00000025895 ENSGALG00000025895 69 0.744 - - - 0.744 - - - - - -
87. PTPRG ENSGALG00000007177 2341 0.744 - - - - - - - 0.744 - - protein tyrosine phosphatase, receptor type G [Source:NCBI gene;Acc:374208]
88. C4H4ORF29 C4H4ORF29 2442 0.744 - - - - - - - 0.744 - -
89. SVIL ENSGALG00000007331 12032 0.743 - - - - - - 0.743 - - - supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
90. CSTF1 ENSGALG00000007757 789 0.741 - - - - - - 0.741 - - - cleavage stimulation factor subunit 1 [Source:HGNC Symbol;Acc:HGNC:2483]
91. ZNF335 ENSGALG00000041370 4740 0.741 - - - - - - - 0.741 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
92. TMEM69 ENSGALG00000010279 716 0.74 - - - 0.740 - - - - - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
93. TSEN54 3192 0.74 - - - - - - 0.740 - - - tRNA splicing endonuclease subunit 54, transcript variant X2
94. AGA ENSGALG00000010716 2299 0.74 - - - - - - 0.740 - - - aspartylglucosaminidase [Source:NCBI gene;Acc:422558]
95. KITLG ENSGALG00000011206 71 0.74 - - - 0.740 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
96. EIF3B ENSGALG00000040999 49971 0.739 - - - - - - 0.739 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
97. MAD2L2 ENSGALG00000004640 3971 0.739 - - - - - - 0.739 - - - MAD2 mitotic arrest deficient-like 2 (yeast) [Source:NCBI gene;Acc:419493]
98. BAI3 BAI3 106 0.739 - - - 0.739 - - - - - -
99. GNG2 ENSGALG00000027629 9404 0.739 - - - - - - 0.739 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
100. DGUOK ENSGALG00000005961 5929 0.738 - - - - - - 0.738 - - - deoxyguanosine kinase [Source:NCBI gene;Acc:770922]

There are 131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA