Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NDC1

Gene Name Gene ID Reads Annotation
NDC1 ENSGALG00000031606 3094 NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]











Genes with expression patterns similar to NDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NDC1 ENSGALG00000031606 3094 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
2. KDM6A ENSGALG00000016217 2302 1.621 - - 0.908 - - - - 0.713 - - lysine demethylase 6A, transcript variant X14
3. MANF ENSGALG00000002362 7518 1.609 - - 0.833 - - - - 0.776 - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
4. SLC12A4 ENSGALG00000034179 5674 1.582 - - 0.831 - - - - 0.751 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
5. URM1 ENSGALG00000004971 17880 1.578 - - 0.875 - - - - 0.703 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
6. TIMMDC1 ENSGALG00000024480 9337 1.57 - - 0.836 - - - - 0.734 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
7. NAB1 ENSGALG00000037778 3467 1.529 - - 0.776 - - - 0.753 - - - NGFI-A binding protein 1 [Source:NCBI gene;Acc:374126]
8. PANK1 ENSGALG00000006431 2910 1.528 - - 0.821 - - - - 0.707 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
9. CSTF3 ENSGALG00000011685 4711 1.521 - - 0.816 - - - - - - 0.705 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
10. C12H3ORF37 C12H3ORF37 6362 1.508 - - 0.737 - - - 0.771 - - -
11. CHMP4B ENSGALG00000002095 17422 1.486 - - 0.782 - - - - 0.704 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
12. PSMD13 ENSGALG00000043684 14720 1.471 - - 0.747 - - - - 0.724 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
13. UTP15 ENSGALG00000013510 13122 1.405 - - - - - - - 0.702 - 0.703 UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
14. CENPO ENSGALG00000016609 1699 0.947 - - 0.947 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
15. AKTIP ENSGALG00000033378 1991 0.946 - - 0.946 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
16. BBS5 ENSGALG00000009846 344 0.944 - - 0.944 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
17. LRRC42 ENSGALG00000010743 384 0.944 - - 0.944 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
18. GTF2H2 ENSGALG00000002399 2361 0.942 - - 0.942 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
19. AASDHPPT ENSGALG00000027981 1017 0.941 - - 0.941 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
20. ENSGALG00000004703 ENSGALG00000004703 112 0.941 - - 0.941 - - - - - - -
21. NUBP1 ENSGALG00000007241 3791 0.941 - - 0.941 - - - - - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
22. TCTN2 ENSGALG00000023683 3596 0.939 - - 0.939 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
23. SMARCAD1 ENSGALG00000037339 149 0.939 - - 0.939 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
24. TRIM13 ENSGALG00000017011 92 0.939 - - 0.939 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
25. CDC14B ENSGALG00000012627 110 0.938 - - 0.938 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
26. L3MBTL3 ENSGALG00000034030 113 0.938 - - 0.938 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
27. RPS6KB1 ENSGALG00000005198 169 0.938 - - 0.938 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
28. F2R ENSGALG00000014983 106 0.938 - - 0.938 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
29. PTDSS2 ENSGALG00000004300 682 0.938 - - 0.938 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
30. U4 U4 69 0.938 - - 0.938 - - - - - - -
31. TTPAL ENSGALG00000004244 2734 0.938 - - 0.938 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
32. AKAP10 ENSGALG00000004679 103 0.938 - - 0.938 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
33. CLEC16A ENSGALG00000007167 66 0.938 - - 0.938 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
34. PRUNE PRUNE 452 0.938 - - 0.938 - - - - - - -
35. UEVLD ENSGALG00000006342 164 0.938 - - 0.938 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
36. KCTD3 ENSGALG00000009678 335 0.938 - - 0.938 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
37. ENSGALG00000028964 ENSGALG00000028964 46 0.937 - - 0.937 - - - - - - -
38. ENSGALG00000020103 ENSGALG00000020103 64 0.937 - - 0.937 - - - - - - -
39. GDPD4 ENSGALG00000000690 824 0.937 - - 0.937 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
40. MRC2 ENSGALG00000000461 48 0.937 - - 0.937 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
41. LRRC71 ENSGALG00000027351 695 0.937 - - 0.937 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
42. ITGB4 ENSGALG00000002389 44 0.937 - - 0.937 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
43. SLC3A1 ENSGALG00000009973 608 0.937 - - 0.937 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
44. RQCD1 RQCD1 110 0.937 - - 0.937 - - - - - - -
45. TDRD6 48 0.937 - - 0.937 - - - - - - - tudor domain containing 6
46. FAM134C 860 0.936 - - 0.936 - - - - - - - family with sequence similarity 134 member C
47. OSGIN2 ENSGALG00000042840 83 0.935 - - 0.935 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
48. DBN1 ENSGALG00000033405 216 0.935 - - 0.935 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
49. MED12 ENSGALG00000036322 814 0.935 - - 0.935 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
50. SZT2 ENSGALG00000028561 255 0.935 - - 0.935 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
51. NXPE3 ENSGALG00000015344 111 0.934 - - 0.934 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
52. PCYT1B 190 0.934 - - 0.934 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
53. TUBGCP3 ENSGALG00000016836 332 0.934 - - 0.934 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
54. ABCC3 ENSGALG00000007522 340 0.934 - - 0.934 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
55. FBXL5 ENSGALG00000014510 245 0.933 - - 0.933 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
56. CA9 ENSGALG00000021340 1431 0.933 - - 0.933 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
57. ENSGALG00000002020 ENSGALG00000002020 183 0.933 - - 0.933 - - - - - - -
58. RAD54L2 ENSGALG00000003243 187 0.932 - - 0.932 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
59. GGT7 ENSGALG00000001062 476 0.931 - - 0.931 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
60. ITM2B ENSGALG00000016996 1112 0.931 - - 0.931 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
61. CAMSAP1 ENSGALG00000001692 2617 0.93 - - 0.930 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
62. MIB1 ENSGALG00000014974 3583 0.93 - - 0.930 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
63. CHGA ENSGALG00000010820 1028 0.93 - - 0.930 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
64. TRAF3IP1 ENSGALG00000004236 7094 0.928 - - 0.928 - - - - - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
65. SGCE ENSGALG00000009670 3070 0.927 - - 0.927 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
66. GFER ENSGALG00000005579 1367 0.927 - - 0.927 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
67. MLLT3 ENSGALG00000015078 502 0.927 - - 0.927 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
68. CHAMP1 ENSGALG00000016813 508 0.926 - - 0.926 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
69. SEPHS1 ENSGALG00000014575 10701 0.926 - - 0.926 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
70. NACAD 679 0.926 - - 0.926 - - - - - - - NAC alpha domain containing, transcript variant X1
71. SMOC2 ENSGALG00000011205 340 0.926 - - 0.926 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
72. GTF2E1 ENSGALG00000042320 7712 0.925 - - 0.925 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
73. PCDH17 ENSGALG00000016941 1006 0.925 - - 0.925 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
74. MED15 ENSGALG00000006430 814 0.925 - - 0.925 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
75. TFAP2C ENSGALG00000007690 768 0.924 - - 0.924 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
76. ADK ENSGALG00000005057 199 0.924 - - 0.924 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
77. CEP104 ENSGALG00000000978 1130 0.924 - - 0.924 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
78. ABCE1 ENSGALG00000009961 958 0.923 - - 0.923 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
79. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.922 - - 0.922 - - - - - - -
80. NGF ENSGALG00000002556 122 0.921 - - 0.921 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
81. RRN3 ENSGALG00000041989 3934 0.921 - - 0.921 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
82. WDR92 ENSGALG00000008760 3934 0.921 - - 0.921 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
83. DDX6 ENSGALG00000033064 2193 0.921 - - 0.921 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
84. BBX ENSGALG00000015353 1281 0.92 - - 0.920 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
85. SELK SELK 15022 0.92 - - 0.920 - - - - - - -
86. ZNF639 ENSGALG00000005944 6387 0.919 - - 0.919 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
87. PEMT ENSGALG00000004875 4094 0.919 - - 0.919 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
88. ATP8B4 ENSGALG00000002326 456 0.919 - - 0.919 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
89. APTX ENSGALG00000001954 692 0.918 - - 0.918 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
90. ENSGALG00000008689 ENSGALG00000008689 232 0.917 - - 0.917 - - - - - - -
91. IFT57 ENSGALG00000015356 5540 0.917 - - 0.917 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
92. HOXA7 ENSGALG00000026989 6746 0.917 - - 0.917 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
93. IFT81 ENSGALG00000003854 2534 0.917 - - 0.917 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
94. TUBA4A ENSGALG00000000433 1367 0.916 - - 0.916 - - - - - - - tubulin alpha 4a
95. SNX14 ENSGALG00000015831 2554 0.916 - - 0.916 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
96. RECQL ENSGALG00000013174 1323 0.915 - - 0.915 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
97. RFK ENSGALG00000033558 1364 0.915 - - 0.915 - - - - - - - riboflavin kinase, transcript variant X3
98. WHSC1 1712 0.915 - - 0.915 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
99. NUDCD2 ENSGALG00000001726 6303 0.915 - - 0.915 - - - - - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
100. DCP1B 1306 0.914 - - 0.914 - - - - - - - decapping mRNA 1B

There are 464 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA