Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NCL

Gene Name Gene ID Reads Annotation
NCL ENSGALG00000032930 66655 nucleolin [Source:NCBI gene;Acc:396201]











Genes with expression patterns similar to NCL

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NCL ENSGALG00000032930 66655 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleolin [Source:NCBI gene;Acc:396201]
2. KIF23 ENSGALG00000008095 9919 1.798 - - - - - - 0.981 0.817 - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
3. TRAPPC8 ENSGALG00000015157 4308 1.763 - - - - - - 0.977 0.786 - - trafficking protein particle complex 8, transcript variant X5
4. PUF60 ENSGALG00000039901 26902 0.994 - - - - - - 0.994 - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
5. SDC3 ENSGALG00000035184 14096 0.989 - - - - - - 0.989 - - - syndecan 3 [Source:NCBI gene;Acc:396343]
6. SERPINE2 ENSGALG00000005135 16108 0.987 - - - - - - 0.987 - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
7. TBRG4 ENSGALG00000038102 9269 0.986 - - - - - - 0.986 - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
8. AP1M1 ENSGALG00000003959 31761 0.984 - - - - - - 0.984 - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
9. SEPHS1 ENSGALG00000014575 10701 0.982 - - - - - - 0.982 - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
10. PCMT1 ENSGALG00000012388 7778 0.982 - - - - - - 0.982 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
11. OGT ENSGALG00000005425 31074 0.982 - - - - - - 0.982 - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
12. STRAP ENSGALG00000013092 13100 0.982 - - - - - - 0.982 - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
13. ARHGDIA ENSGALG00000008443 39103 0.981 - - - - - - 0.981 - - - Rho GDP dissociation inhibitor alpha [Source:NCBI gene;Acc:769231]
14. SPPL2A ENSGALG00000031348 16700 0.981 - - - - - - 0.981 - - - signal peptide peptidase like 2A [Source:NCBI gene;Acc:415450]
15. RND3 ENSGALG00000026313 9271 0.98 - - - - - - 0.980 - - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
16. UBE2I ENSGALG00000006428 18421 0.98 - - - - - - 0.980 - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
17. DIABLO ENSGALG00000004412 9499 0.979 - - - - - - 0.979 - - - diablo IAP-binding mitochondrial protein, transcript variant X3
18. ZNF462 ENSGALG00000015451 12653 0.978 - - - - - - 0.978 - - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
19. NDUFA4 ENSGALG00000025999 53323 0.978 - - - - - - 0.978 - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
20. CHTOP ENSGALG00000042129 24112 0.978 - - - - - - 0.978 - - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
21. C4H8ORF40 C4H8ORF40 6145 0.978 - - - - - - 0.978 - - -
22. ARG2 ENSGALG00000009519 19523 0.977 - - - - - - 0.977 - - - arginase 2 [Source:NCBI gene;Acc:423272]
23. ANO5 ENSGALG00000003748 3959 0.976 - - - - - - 0.976 - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
24. SGK1 ENSGALG00000013971 2608 0.975 - - - - - - 0.975 - - - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
25. RALGDS ENSGALG00000003412 4478 0.975 - - - - - - 0.975 - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
26. PRKX ENSGALG00000042759 2418 0.975 - - - - - - 0.975 - - - protein kinase X-linked [Source:HGNC Symbol;Acc:HGNC:9441]
27. C5H15ORF57 C5H15ORF57 4113 0.975 - - - - - - 0.975 - - -
28. RBM24 ENSGALG00000012712 4138 0.975 - - - - - - 0.975 - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
29. LYN ENSGALG00000042321 3539 0.975 - - - - - - 0.975 - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
30. WWP1 ENSGALG00000041795 2291 0.974 - - - - - - 0.974 - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:420212]
31. VPS13B 2293 0.974 - - - - - - 0.974 - - - vacuolar protein sorting 13 homolog B
32. CAMK2D ENSGALG00000041635 3384 0.974 - - - - - - 0.974 - - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
33. GOLPH3 ENSGALG00000028267 9692 0.974 - - - - - - 0.974 - - - golgi phosphoprotein 3, transcript variant X1
34. ENSGALG00000027132 ENSGALG00000027132 1704 0.974 - - - - - - 0.974 - - -
35. ANXA2 ENSGALG00000003770 18252 0.973 - - - - - - 0.973 - - - annexin A2 [Source:NCBI gene;Acc:396297]
36. CENPE ENSGALG00000013208 12337 0.973 - - - - - - 0.973 - - - centromere protein E, transcript variant X4
37. TMF1 ENSGALG00000013408 3344 0.973 - - - - - - 0.973 - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
38. C10orf54 C10orf54 2444 0.973 - - - - - - 0.973 - - -
39. TF ENSGALG00000006453 14007 0.971 - - - - - - 0.971 - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
40. UBE2D3 ENSGALG00000012311 39831 0.966 - - - - - - 0.966 - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
41. CCT8 ENSGALG00000015821 12161 0.964 - - - - - - 0.964 - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
42. ENSGALG00000021397 ENSGALG00000021397 51155 0.957 - - - - - - 0.957 - - -
43. OAZ OAZ 45951 0.912 - - - - - - 0.912 - - -
44. PLS3 ENSGALG00000005930 12625 0.903 - - - - - - 0.903 - - - plastin 3 [Source:NCBI gene;Acc:422222]
45. HSP90AB1 ENSGALG00000010175 77935 0.9 - - - - - - 0.900 - - - heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
46. PLEKHH3 ENSGALG00000037269 875 0.894 - - - - - - - - 0.894 - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
47. RPLP2 ENSGALG00000034811 152607 0.885 - - - - - - 0.885 - - - ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
48. PDZRN4 ENSGALG00000009530 832 0.881 - - - - - - - - 0.881 - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
49. LHCGR ENSGALG00000009095 174 0.875 - - - - - - - - 0.875 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
50. SORD ENSGALG00000031408 2119 0.875 - - - - - - - - 0.875 - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
51. CAMKK1 ENSGALG00000001617 64 0.87 - - - - - - - - 0.870 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
52. ALMS1 ENSGALG00000044620 570 0.866 - - - - - - - - 0.866 - ALMS1, centrosome and basal body associated protein, transcript variant X1
53. KIAA1217 ENSGALG00000007766 144 0.865 - - - - - - - - 0.865 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
54. C7 ENSGALG00000014835 322 0.862 - - - - - - - - 0.862 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
55. PRDM15 ENSGALG00000019178 2729 0.862 - - - - - - - - 0.862 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
56. MEIS2 ENSGALG00000039118 81591 0.86 - - - - - - 0.860 - - - Meis homeobox 2 [Source:NCBI gene;Acc:395588]
57. SMARCB1 ENSGALG00000005983 20548 0.86 - - - - - - 0.860 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
58. BCAS2 ENSGALG00000002002 22536 0.856 - - - - - - - 0.856 - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
59. IGF1R ENSGALG00000040651 772 0.856 - - - - - - - - 0.856 - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
60. CEP112 ENSGALG00000034989 123 0.856 - - - - - - - - 0.856 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
61. PSMA6 ENSGALG00000010060 26517 0.852 - - - - - - - 0.852 - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
62. TOM1L2 ENSGALG00000004902 89 0.852 - - - - - - - - 0.852 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
63. FAM120B ENSGALG00000011180 101 0.851 - - - - - - - - 0.851 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
64. LRRC59 ENSGALG00000007673 2081 0.85 - - - - - - - - 0.850 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
65. TBC1D23 ENSGALG00000015273 4856 0.85 - - - - - - 0.850 - - - TBC1 domain family member 23 [Source:NCBI gene;Acc:418383]
66. SLTM ENSGALG00000004192 3244 0.849 - - - - - - - - 0.849 - SAFB like transcription modulator [Source:HGNC Symbol;Acc:HGNC:20709]
67. MIB1 ENSGALG00000014974 3583 0.849 - - - - - - - - 0.849 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
68. KLHL15 ENSGALG00000016345 1638 0.848 - - - - - - - - 0.848 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
69. CEP250 ENSGALG00000026151 163 0.844 - - - - - - - - 0.844 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
70. NTL ENSGALG00000005156 278 0.844 - - - - - - - - 0.844 - neurotrypsin-like, transcript variant X7
71. PLCXD3 ENSGALG00000014845 247 0.843 - - - - - - - - 0.843 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
72. SLCO4A1 ENSGALG00000005460 109 0.839 - - - - - - - - 0.839 - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
73. GSPT1 15580 0.839 - - - - - - - 0.839 - - G1 to S phase transition 1, transcript variant X1
74. PCLO 249 0.837 - - - - - - - - 0.837 - piccolo presynaptic cytomatrix protein
75. ELL2 ENSGALG00000014678 1111 0.835 - - - - - - - - 0.835 - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
76. ENSGALG00000026919 ENSGALG00000026919 301 0.833 - - - - - - - - 0.833 -
77. RAD17 ENSGALG00000015571 1374 0.833 - - - - - - - - 0.833 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
78. ZDHHC7 ENSGALG00000042522 1774 0.833 - - - - - - - - 0.833 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
79. TMED2 ENSGALG00000003307 20704 0.833 - - - - - - - 0.833 - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
80. IQCA1 ENSGALG00000003980 87 0.832 - - - - - - - - 0.832 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
81. ENSGALG00000014171 ENSGALG00000014171 10383 0.832 - - - - - - - - 0.832 -
82. SERINC2 ENSGALG00000021685 1581 0.832 - - - - - - - - 0.832 - serine incorporator 2 [Source:NCBI gene;Acc:419558]
83. NUDCD2 ENSGALG00000001726 6303 0.831 - - - - - - - 0.831 - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
84. GSTAL2 ENSGALG00000028551 4899 0.83 - - - - - - - 0.830 - - glutathione S-transferase alpha-like 2, transcript variant X4
85. FDFT1 ENSGALG00000016665 3053 0.829 - - - - - - - - 0.829 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
86. DCP1B 1306 0.828 - - - - - - - - 0.828 - decapping mRNA 1B
87. CUX2 ENSGALG00000004598 231 0.826 - - - - - - - - 0.826 - cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
88. YBX3 ENSGALG00000031890 819 0.825 - - - - - - - - 0.825 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
89. FGD5 ENSGALG00000008546 4031 0.822 - - - - - - - - 0.822 - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
90. SMAP2 ENSGALG00000029244 498 0.821 - - - - - - - - 0.821 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
91. NRXN1 ENSGALG00000009107 277 0.82 - - - - - - - - 0.820 - neurexin 1 [Source:NCBI gene;Acc:395398]
92. ODZ2 ODZ2 1380 0.82 - - - - - - - - 0.820 -
93. ZNF618 ENSGALG00000008886 1326 0.819 - - - - - - - - 0.819 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
94. PDXDC1 ENSGALG00000034829 406 0.819 - - - - - - - - 0.819 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
95. EXOSC8 ENSGALG00000017048 2939 0.819 - - - - - - - - 0.819 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
96. L3HYPDH ENSGALG00000012011 2212 0.817 - - - - - - - - 0.817 - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
97. MSX2 ENSGALG00000038848 6950 0.816 - - - - - - - - 0.816 - msh homeobox 2 [Source:NCBI gene;Acc:395245]
98. ZNF217 ZNF217 14511 0.814 - - - - - - 0.814 - - -
99. CARS2 ENSGALG00000016847 3814 0.814 - - - - - - - - 0.814 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
100. ABCC8 ENSGALG00000006172 41 0.814 - - - - - - - - 0.814 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]

There are 251 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA