Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NBN

Gene Name Gene ID Reads Annotation
NBN ENSGALG00000037686 648 nibrin [Source:NCBI gene;Acc:374246]











Genes with expression patterns similar to NBN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NBN ENSGALG00000037686 648 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nibrin [Source:NCBI gene;Acc:374246]
2. TRIM3 ENSGALG00000034004 110 1.814 - - - - - - - - 0.852 0.962 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
3. ELL2 ENSGALG00000014678 1111 1.707 - - - - - - - - 0.771 0.936 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
4. MDN1 ENSGALG00000015733 2352 1.653 - - - - - - - - 0.802 0.851 midasin AAA ATPase 1, transcript variant X1
5. DENND1A ENSGALG00000001157 503 1.626 - - - - - - - - 0.737 0.889 DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
6. U2SURP ENSGALG00000002612 4255 1.625 - - - - - - - - 0.762 0.863 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
7. ANKRD50 ENSGALG00000011831 2870 1.594 - - - - - - - - 0.806 0.788 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
8. OGFOD3 ENSGALG00000001618 2438 1.589 - - - - - - - - 0.738 0.851 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
9. WDR36 ENSGALG00000000247 11277 1.58 - - - - - - - - 0.775 0.805 WD repeat domain 36 [Source:NCBI gene;Acc:415609]
10. RFFL ENSGALG00000002225 928 1.563 - - - - - - - - 0.751 0.812 ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
11. YBX3 ENSGALG00000031890 819 1.502 - - - - - - - - 0.733 0.769 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
12. PRICKLE1 ENSGALG00000009556 60 0.962 - - - - - - - - - 0.962 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
13. CCBL2 CCBL2 184 0.961 - - - - - - - - - 0.961
14. RABEP1 ENSGALG00000001737 2650 0.96 - - - - - - - - 0.960 - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
15. ATP2B2 ENSGALG00000030908 584 0.959 - - - - - - - - - 0.959 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
16. TFG ENSGALG00000015299 849 0.958 - - - - - - - - - 0.958 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
17. UBE3C ENSGALG00000006461 57 0.958 - - - - - - - - - 0.958 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
18. PROCR ENSGALG00000006547 645 0.957 - - - - - - - - - 0.957 protein C receptor [Source:NCBI gene;Acc:424867]
19. TM6SF2 ENSGALG00000029015 109 0.957 - - - - - - - - - 0.957 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
20. AGMO ENSGALG00000010792 76 0.957 - - - - - - - - - 0.957 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
21. CNKSR3 ENSGALG00000027159 41 0.957 - - - - - - - - - 0.957 CNKSR family member 3, transcript variant X2
22. ENSGALG00000008594 ENSGALG00000008594 54 0.956 - - - - - - - - - 0.956
23. SLC38A1 ENSGALG00000009698 566 0.956 - - - - - - - - - 0.956 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
24. SOS2 ENSGALG00000012273 41 0.956 - - - - - - - - - 0.956 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
25. PTPRE ENSGALG00000009823 250 0.956 - - - - - - - - - 0.956 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
26. MAP3K8 ENSGALG00000007356 188 0.955 - - - - - - - - - 0.955 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
27. BCOR ENSGALG00000016245 85 0.955 - - - - - - - - - 0.955 BCL6 corepressor, transcript variant X8
28. ENSGALG00000018358 ENSGALG00000018358 101 0.955 - - - - - - - - - 0.955
29. DTX2 ENSGALG00000001905 1475 0.955 - - - - - - - - - 0.955 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
30. ADAMTS12 55 0.955 - - - - - - - - - 0.955 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
31. ENSGALG00000004772 ENSGALG00000004772 173 0.953 - - - - - - - - - 0.953
32. TTI1 ENSGALG00000006791 1218 0.953 - - - - - - - - - 0.953 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
33. ENSGALG00000027621 ENSGALG00000027621 863 0.952 - - - - - - - - - 0.952
34. ENSGALG00000001919 ENSGALG00000001919 531 0.952 - - - - - - - - - 0.952
35. ENSGALG00000004643 ENSGALG00000004643 2297 0.951 - - - - - - - - - 0.951
36. RGP1 ENSGALG00000002394 5937 0.951 - - - - - - - - - 0.951 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
37. RP9 ENSGALG00000035453 1186 0.95 - - - - - - - - - 0.950 retinitis pigmentosa 9 (autosomal dominant)
38. NFKBIE ENSGALG00000044525 633 0.95 - - - - - - - - - 0.950 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
39. PDCD7 ENSGALG00000021027 3807 0.95 - - - - - - - - - 0.950 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
40. SERPINB6 ENSGALG00000012866 1582 0.949 - - - - - - - - - 0.949 serpin family B member 6 [Source:NCBI gene;Acc:420895]
41. ZFPM2 ENSGALG00000040079 942 0.949 - - - - - - - - - 0.949 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
42. ZNF142 ENSGALG00000011393 2078 0.948 - - - - - - - - - 0.948 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
43. GRPEL2 ENSGALG00000002673 105 0.948 - - - - - - - - - 0.948 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
44. RASSF8 ENSGALG00000014041 850 0.947 - - - - - - - - - 0.947 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
45. SHPK ENSGALG00000004637 2386 0.947 - - - - - - - - - 0.947 sedoheptulokinase, transcript variant X1
46. PMVK ENSGALG00000046656 645 0.946 - - - - - - - - - 0.946 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
47. SUPV3L1 ENSGALG00000004197 4141 0.946 - - - - - - - - - 0.946 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
48. GPR114 GPR114 46 0.946 - - - - - - - - - 0.946
49. MAP3K3 ENSGALG00000000525 115 0.945 - - - - - - - - - 0.945 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
50. CTK-1 CTK-1 1618 0.945 - - - - - - - - - 0.945
51. STX6 3297 0.944 - - - - - - - - - 0.944 syntaxin 6
52. TRIM24 ENSGALG00000012823 2725 0.943 - - - - - - - - - 0.943 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
53. VAV2 ENSGALG00000002699 503 0.943 - - - - - - - - - 0.943 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
54. EEA1 ENSGALG00000011280 923 0.943 - - - - - - - - - 0.943 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
55. USP36 ENSGALG00000037018 783 0.942 - - - - - - - - - 0.942 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
56. PIGW ENSGALG00000023554 951 0.942 - - - - - - - - - 0.942 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
57. MAP3K5 ENSGALG00000013892 565 0.942 - - - - - - - - 0.942 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
58. RPGR ENSGALG00000036284 186 0.942 - - - - - - - - - 0.942 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
59. TYSND1 ENSGALG00000033807 716 0.941 - - - - - - - - - 0.941 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
60. PKDCCB ENSGALG00000011166 74 0.941 - - - - - - - - - 0.941 protein kinase domain containing, cytoplasmic b
61. TGFB3 ENSGALG00000010346 3118 0.939 - - - - - - - - - 0.939 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
62. TMEM199 ENSGALG00000023757 10781 0.938 - - - - - - - - - 0.938 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
63. DUSP23 1663 0.938 - - - - - - - - - 0.938 dual specificity phosphatase 23, transcript variant X1
64. CENPJ ENSGALG00000017148 1415 0.938 - - - - - - - - - 0.938 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
65. IFNAR2 ENSGALG00000041867 1596 0.937 - - - - - - - - - 0.937 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
66. CTCF 10811 0.936 - - - - - - - - - 0.936 CCCTC-binding factor, transcript variant X2
67. FOXP1 127 0.935 - - - - - - - - - 0.935 forkhead box P1, transcript variant X14
68. MITF ENSGALG00000039583 865 0.935 - - - - - - - - - 0.935 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
69. C5orf24 ENSGALG00000006371 1573 0.934 - - - - - - - - - 0.934 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
70. PDCD4 ENSGALG00000008700 574 0.934 - - - - - - - - - 0.934 programmed cell death 4 [Source:NCBI gene;Acc:374191]
71. CKI CKI 2845 0.934 - - - - - - - - - 0.934
72. RPRD2 ENSGALG00000014656 939 0.933 - - - - - - - - - 0.933 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
73. RFWD3 2315 0.932 - - - - - - - - - 0.932 ring finger and WD repeat domain 3
74. EDEM2 ENSGALG00000003128 3338 0.932 - - - - - - - - - 0.932 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
75. TRIP4 ENSGALG00000030672 1255 0.931 - - - - - - - - - 0.931 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
76. NHLRC2 ENSGALG00000008946 387 0.931 - - - - - - - - - 0.931 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
77. TNFRSF21 ENSGALG00000016719 2762 0.93 - - - - - - - - - 0.930 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
78. FTSJ3 ENSGALG00000032993 8929 0.93 - - - - - - - - - 0.930 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
79. MRPS5 ENSGALG00000008550 1707 0.93 - - - - - - - - - 0.930 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
80. PCMTD2 ENSGALG00000005901 1833 0.929 - - - - - - - - - 0.929 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
81. BZFP1 ENSGALG00000027546 632 0.929 - - - - - - - - - 0.929 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
82. VOPP1 ENSGALG00000042773 771 0.928 - - - - - - - - - 0.928 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
83. AP3B2 2331 0.928 - - - - - - - - - 0.928 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
84. TRMT44 ENSGALG00000015594 1490 0.928 - - - - - - - - - 0.928 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
85. PRR11 2624 0.926 - - - - - - - - - 0.926 proline rich 11, transcript variant X8
86. FN3K ENSGALG00000001531 208 0.926 - - - - - - - - - 0.926 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
87. STAT5 STAT5 1796 0.926 - - - - - - - - - 0.926
88. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.925 - - - - - - - - - 0.925 family with sequence similarity 83, member D
89. CEP57 ENSGALG00000017201 524 0.924 - - - - - - - - - 0.924 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
90. HPS4 ENSGALG00000005595 2217 0.924 - - - - - - - - - 0.924 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
91. ACOX1 ENSGALG00000002159 2953 0.924 - - - - - - - - - 0.924 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
92. MASP1 ENSGALG00000007419 141 0.923 - - - - - - - - - 0.923 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
93. LUZP1 ENSGALG00000025858 947 0.923 - - - - - - - - - 0.923 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
94. RAB34 ENSGALG00000026315 1193 0.921 - - - - - - - - - 0.921 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
95. PERP PERP 734 0.921 - - - - - - - - - 0.921
96. PRKAB2 ENSGALG00000001678 1999 0.921 - - - - - - - - - 0.921 protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
97. EP3 EP3 741 0.918 - - - - - - - - - 0.918
98. FBXL2 ENSGALG00000030175 157 0.917 - - - - - - - - - 0.917 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]
99. RAB11FIP2 ENSGALG00000009304 913 0.917 - - - - - - - - - 0.917 RAB11 family interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29152]
100. INTS8 ENSGALG00000037955 3349 0.917 - - - - - - - - - 0.917 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]

There are 471 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA