Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Msra

Gene Name Gene ID Reads Annotation
Msra ENSMUSG00000054733 407 methionine sulfoxide reductase A [Source:MGI Symbol;Acc:MGI:106916]







Genes with expression patterns similar to Msra

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Msra ENSMUSG00000054733 407 6 1.000 1.000 1.000 1.000 1.000 1.000 methionine sulfoxide reductase A [Source:MGI Symbol;Acc:MGI:106916]
2. Gm5863 ENSMUSG00000082927 407 1.713 - - 0.773 - 0.940 - predicted gene 5863 [Source:MGI Symbol;Acc:MGI:3648580]
3. 3110043O21Rik 488 1.67 - - 0.759 - 0.911 - RIKEN cDNA 3110043O21 gene, transcript variant X2
4. Astn1 ENSMUSG00000026587 613 1.628 - - 0.756 - 0.872 - astrotactin 1 [Source:MGI Symbol;Acc:MGI:1098567]
5. Scamp5 ENSMUSG00000040722 166 1.582 - 0.842 0.740 - - - secretory carrier membrane protein 5 [Source:MGI Symbol;Acc:MGI:1928948]
6. Zfp2 ENSMUSG00000049321 376 1.537 - - 0.715 - 0.822 - zinc finger protein 2 [Source:MGI Symbol;Acc:MGI:99167]
7. Col22a1 ENSMUSG00000079022 290 1.517 - - 0.735 - 0.782 - collagen, type XXII, alpha 1 [Source:MGI Symbol;Acc:MGI:1916950]
8. Zfp319 ENSMUSG00000046556 583 1.477 - - 0.708 - 0.769 - zinc finger protein 319 [Source:MGI Symbol;Acc:MGI:1890618]
9. Hic2 ENSMUSG00000050240 2857 1.468 - - 0.754 - 0.714 - hypermethylated in cancer 2 [Source:MGI Symbol;Acc:MGI:1929869]
10. Adamts17 ENSMUSG00000058145 169 0.967 - - - - 0.967 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17 [Source:MGI Symbol;Acc:MGI:3588195]
11. 1110032F04Rik ENSMUSG00000046999 184 0.959 - - - - 0.959 - RIKEN cDNA 1110032F04 gene [Source:MGI Symbol;Acc:MGI:1915975]
12. Xkr6 ENSMUSG00000035067 533 0.942 - - - - 0.942 - X-linked Kx blood group related 6 [Source:MGI Symbol;Acc:MGI:2447765]
13. Hps3 ENSMUSG00000027615 596 0.941 - - - - 0.941 - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:MGI Symbol;Acc:MGI:2153839]
14. Gm16287 ENSMUSG00000073739 273 0.939 - - - - 0.939 - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
15. Gm11792 ENSMUSG00000083137 57 0.937 - - - - 0.937 - predicted gene 11792 [Source:MGI Symbol;Acc:MGI:3652127]
16. Cldn1 ENSMUSG00000022512 77 0.936 - - - - 0.936 - claudin 1 [Source:MGI Symbol;Acc:MGI:1276109]
17. Gm20605 ENSMUSG00000029720 375 0.936 - - - - 0.936 - predicted gene 20605 [Source:MGI Symbol;Acc:MGI:5306917]
18. Gm13132 ENSMUSG00000081276 68 0.936 - - - - 0.936 - predicted gene 13132 [Source:MGI Symbol;Acc:MGI:3651366]
19. Ankrd13c ENSMUSG00000039988 429 0.935 - - - - 0.935 - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
20. Mrap ENSMUSG00000039956 92 0.935 - - - - 0.935 - melanocortin 2 receptor accessory protein [Source:MGI Symbol;Acc:MGI:1924287]
21. Tmem204 ENSMUSG00000024168 307 0.935 - - - - 0.935 - transmembrane protein 204 [Source:MGI Symbol;Acc:MGI:3039635]
22. Maz ENSMUSG00000030678 250 0.935 - - - - 0.935 - MYC-associated zinc finger protein (purine-binding transcription factor) [Source:MGI Symbol;Acc:MGI:1338823]
23. C130036L24Rik ENSMUSG00000073627 155 0.933 - - - - 0.933 - RIKEN cDNA C130036L24 gene [Source:MGI Symbol;Acc:MGI:2441877]
24. Gm16551 ENSMUSG00000066477 147 0.932 - - - - 0.932 - predicted gene 16551 [Source:MGI Symbol;Acc:MGI:4414971]
25. Tchh ENSMUSG00000052415 60 0.932 - - - - 0.932 - trichohyalin [Source:MGI Symbol;Acc:MGI:2177944]
26. Ticrr ENSMUSG00000046591 631 0.931 - - - - 0.931 - TOPBP1-interacting checkpoint and replication regulator [Source:MGI Symbol;Acc:MGI:1924261]
27. Sphk1 ENSMUSG00000061878 72 0.931 - - - - 0.931 - sphingosine kinase 1 [Source:MGI Symbol;Acc:MGI:1316649]
28. Myo16 ENSMUSG00000039057 160 0.929 - - - - 0.929 - myosin XVI [Source:MGI Symbol;Acc:MGI:2685951]
29. Rps12l2 Rps12l2 94 0.927 - - - - 0.927 -
30. Sez6 ENSMUSG00000000632 145 0.926 - - - - 0.926 - seizure related gene 6 [Source:MGI Symbol;Acc:MGI:104745]
31. Barhl2 ENSMUSG00000034384 99 0.926 - - - - 0.926 - BarH like homeobox 2 [Source:MGI Symbol;Acc:MGI:1859314]
32. Adcy7 ENSMUSG00000031659 202 0.926 - - - - 0.926 - adenylate cyclase 7 [Source:MGI Symbol;Acc:MGI:102891]
33. Wnt3 ENSMUSG00000000125 142 0.924 - - - - 0.924 - wingless-type MMTV integration site family, member 3 [Source:MGI Symbol;Acc:MGI:98955]
34. Zswim7 ENSMUSG00000014243 799 0.924 - - - - 0.924 - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
35. E130309D02Rik ENSMUSG00000039244 390 0.923 - - - - 0.923 - RIKEN cDNA E130309D02 gene [Source:MGI Symbol;Acc:MGI:2442621]
36. Tceal3 ENSMUSG00000044550 742 0.922 - - - - 0.922 - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
37. Zfp414 ENSMUSG00000073423 326 0.921 - - - - 0.921 - zinc finger protein 414 [Source:MGI Symbol;Acc:MGI:1915641]
38. Rnf2 ENSMUSG00000026484 5321 0.921 - - - - 0.921 - ring finger protein 2 [Source:MGI Symbol;Acc:MGI:1101759]
39. Tmem163 ENSMUSG00000026347 282 0.921 - - - - 0.921 - transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
40. Gm12191 ENSMUSG00000083061 359 0.919 - - - - 0.919 - predicted gene 12191 [Source:MGI Symbol;Acc:MGI:3651293]
41. Gstm5 ENSMUSG00000004032 1525 0.919 - - - - 0.919 - glutathione S-transferase, mu 5 [Source:MGI Symbol;Acc:MGI:1309466]
42. Pinx1 ENSMUSG00000021958 1439 0.919 - - - - 0.919 - PIN2/TERF1 interacting, telomerase inhibitor 1 [Source:MGI Symbol;Acc:MGI:1919650]
43. Gm6136 ENSMUSG00000084106 261 0.919 - - - - 0.919 - predicted pseudogene 6136 [Source:MGI Symbol;Acc:MGI:3646897]
44. Mkrn3 ENSMUSG00000070527 269 0.918 - - - - 0.918 - makorin, ring finger protein, 3 [Source:MGI Symbol;Acc:MGI:2181178]
45. Sorbs3 ENSMUSG00000022091 397 0.917 - - - - 0.917 - sorbin and SH3 domain containing 3 [Source:MGI Symbol;Acc:MGI:700013]
46. Zfp125 ENSMUSG00000069755 218 0.916 - - - - 0.916 - zinc finger protein 125 [Source:MGI Symbol;Acc:MGI:1336211]
47. 1600002H07Rik 740 0.915 - - - - 0.915 - RIKEN cDNA 1600002H07 gene, transcript variant X2
48. Wdr19 ENSMUSG00000037890 402 0.915 - - - - 0.915 - WD repeat domain 19 [Source:MGI Symbol;Acc:MGI:2443231]
49. Dhtkd1 ENSMUSG00000025815 258 0.915 - - - - 0.915 - dehydrogenase E1 and transketolase domain containing 1 [Source:MGI Symbol;Acc:MGI:2445096]
50. Ypel3 ENSMUSG00000042675 3138 0.915 - - - - 0.915 - yippee like 3 [Source:MGI Symbol;Acc:MGI:1913340]
51. Nkain1 ENSMUSG00000078532 323 0.915 - - - - 0.915 - Na+/K+ transporting ATPase interacting 1 [Source:MGI Symbol;Acc:MGI:1914399]
52. Arfgap3 ENSMUSG00000054277 1293 0.914 - - - - 0.914 - ADP-ribosylation factor GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:1913501]
53. Amacr ENSMUSG00000022244 358 0.91 - - - - 0.910 - alpha-methylacyl-CoA racemase [Source:MGI Symbol;Acc:MGI:1098273]
54. Gareml 193 0.909 - - - - 0.909 - GRB2 associated, regulator of MAPK1-like
55. 4931414P19Rik ENSMUSG00000022179 746 0.908 - - - - 0.908 - RIKEN cDNA 4931414P19 gene [Source:MGI Symbol;Acc:MGI:1921609]
56. Grik5 ENSMUSG00000003378 363 0.906 - - - - 0.906 - glutamate receptor, ionotropic, kainate 5 (gamma 2) [Source:MGI Symbol;Acc:MGI:95818]
57. 2300009A05Rik ENSMUSG00000032403 871 0.905 - - - - 0.905 - RIKEN cDNA 2300009A05 gene [Source:MGI Symbol;Acc:MGI:1916728]
58. Gm26764 ENSMUSG00000097667 599 0.905 - - - - 0.905 - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
59. Aifm2 ENSMUSG00000020085 140 0.905 - - - - 0.905 - apoptosis-inducing factor, mitochondrion-associated 2 [Source:MGI Symbol;Acc:MGI:1918611]
60. Ing5 ENSMUSG00000026283 657 0.904 - - - - 0.904 - inhibitor of growth family, member 5 [Source:MGI Symbol;Acc:MGI:1922816]
61. Abcb8 ENSMUSG00000028973 649 0.904 - - - - 0.904 - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:MGI Symbol;Acc:MGI:1351667]
62. Cdh15 ENSMUSG00000031962 318 0.903 - - - - 0.903 - cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
63. 2310035C23Rik 513 0.902 - - - - 0.902 - RIKEN cDNA 2310035C23 gene, transcript variant X14
64. Arl6 ENSMUSG00000022722 609 0.902 - - - - 0.902 - ADP-ribosylation factor-like 6 [Source:MGI Symbol;Acc:MGI:1927136]
65. Nudt10 ENSMUSG00000073293 707 0.902 - - - - 0.902 - nudix (nucleoside diphosphate linked moiety X)-type motif 10 [Source:MGI Symbol;Acc:MGI:2147931]
66. Tmem63b ENSMUSG00000036026 357 0.9 - - - - 0.900 - transmembrane protein 63b [Source:MGI Symbol;Acc:MGI:2387609]
67. Sik2 ENSMUSG00000037112 1369 0.9 - - - - 0.900 - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
68. Gm11961 ENSMUSG00000056288 300 0.899 - - - - 0.899 - predicted gene 11961 [Source:MGI Symbol;Acc:MGI:3652303]
69. Gtf2h4 ENSMUSG00000001524 502 0.899 - - - - 0.899 - general transcription factor II H, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1338799]
70. Rab39b ENSMUSG00000031202 360 0.899 - - - - 0.899 - RAB39B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1915040]
71. Lin37 ENSMUSG00000036845 280 0.898 - - - - 0.898 - lin-37 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1922910]
72. Trim45 ENSMUSG00000033233 404 0.898 - - - - 0.898 - tripartite motif-containing 45 [Source:MGI Symbol;Acc:MGI:1918187]
73. Tmem138 ENSMUSG00000024666 1036 0.898 - - - - 0.898 - transmembrane protein 138 [Source:MGI Symbol;Acc:MGI:1920232]
74. Pard6b ENSMUSG00000044641 535 0.898 - - - - 0.898 - par-6 family cell polarity regulator beta [Source:MGI Symbol;Acc:MGI:2135605]
75. Enthd2 271 0.897 - - - - 0.897 - ENTH domain containing 2, transcript variant X3
76. Stk40 ENSMUSG00000042608 1035 0.894 - - - - 0.894 - serine/threonine kinase 40 [Source:MGI Symbol;Acc:MGI:1921428]
77. Shb ENSMUSG00000044813 322 0.893 - - - - 0.893 - src homology 2 domain-containing transforming protein B [Source:MGI Symbol;Acc:MGI:98294]
78. Klhdc4 ENSMUSG00000040263 710 0.893 - - - - 0.893 - kelch domain containing 4 [Source:MGI Symbol;Acc:MGI:2384569]
79. Trim13 ENSMUSG00000035235 728 0.893 - - - - 0.893 - tripartite motif-containing 13 [Source:MGI Symbol;Acc:MGI:1913847]
80. Pabpn1 ENSMUSG00000022194 1359 0.892 - - - - 0.892 - poly(A) binding protein, nuclear 1 [Source:MGI Symbol;Acc:MGI:1859158]
81. Nck1 ENSMUSG00000032475 1234 0.892 - - - - 0.892 - non-catalytic region of tyrosine kinase adaptor protein 1 [Source:MGI Symbol;Acc:MGI:109601]
82. Rbm38 ENSMUSG00000027510 566 0.892 - - - - 0.892 - RNA binding motif protein 38 [Source:MGI Symbol;Acc:MGI:1889294]
83. Fam73a 1247 0.892 - - - - 0.892 - family with sequence similarity 73, member A, transcript variant X2
84. Aig1 ENSMUSG00000019806 816 0.891 - - - - 0.891 - androgen-induced 1 [Source:MGI Symbol;Acc:MGI:1913503]
85. Gm5776 ENSMUSG00000099647 589 0.891 - - - - 0.891 - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
86. Lrrc4b ENSMUSG00000047085 349 0.891 - - - - 0.891 - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
87. 1110034G24Rik 289 0.891 - - - - 0.891 - RIKEN cDNA 1110034G24 gene, transcript variant X6
88. Lrp2 ENSMUSG00000027070 303 0.891 - - - - 0.891 - low density lipoprotein receptor-related protein 2 [Source:MGI Symbol;Acc:MGI:95794]
89. Slc35f1 ENSMUSG00000038602 342 0.89 - - - - 0.890 - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
90. Sin3a ENSMUSG00000042557 4019 0.89 - - - - 0.890 - transcriptional regulator, SIN3A (yeast) [Source:MGI Symbol;Acc:MGI:107157]
91. Lss ENSMUSG00000033105 1532 0.887 - - - - 0.887 - lanosterol synthase [Source:MGI Symbol;Acc:MGI:1336155]
92. Lemd2 ENSMUSG00000044857 775 0.887 - - - - 0.887 - LEM domain containing 2 [Source:MGI Symbol;Acc:MGI:2385045]
93. Ubap1 ENSMUSG00000028437 2702 0.887 - - - - 0.887 - ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
94. Fam210a ENSMUSG00000038121 857 0.886 - - - - 0.886 - family with sequence similarity 210, member A [Source:MGI Symbol;Acc:MGI:1914000]
95. l7Rn6 2860 0.886 - - - - 0.886 - lethal, Chr 7, Rinchik 6, transcript variant X2
96. Ift81 ENSMUSG00000029469 806 0.885 - - - - 0.885 - intraflagellar transport 81 [Source:MGI Symbol;Acc:MGI:1098597]
97. Xrcc3 ENSMUSG00000021287 302 0.884 - - - - 0.884 - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:MGI Symbol;Acc:MGI:1921585]
98. Dnajc12 ENSMUSG00000036764 649 0.884 - - - - 0.884 - DnaJ heat shock protein family (Hsp40) member C12 [Source:MGI Symbol;Acc:MGI:1353428]
99. Ptgr2 ENSMUSG00000072946 410 0.884 - - - - 0.884 - prostaglandin reductase 2 [Source:MGI Symbol;Acc:MGI:1916372]
100. Tmem241 ENSMUSG00000049411 173 0.884 - - - - 0.884 - transmembrane protein 241 [Source:MGI Symbol;Acc:MGI:2442435]

There are 524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA