Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Msh6

Gene Name Gene ID Reads Annotation
Msh6 ENSMUSG00000005370 4347 mutS homolog 6 [Source:MGI Symbol;Acc:MGI:1343961]







Genes with expression patterns similar to Msh6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Msh6 ENSMUSG00000005370 4347 6 1.000 1.000 1.000 1.000 1.000 1.000 mutS homolog 6 [Source:MGI Symbol;Acc:MGI:1343961]
2. Efr3a ENSMUSG00000015002 5598 1.939 1.000 0.939 - - - - EFR3 homolog A [Source:MGI Symbol;Acc:MGI:1923990]
3. Crip2 ENSMUSG00000006356 4180 1.7 - 0.951 - - 0.749 - cysteine rich protein 2 [Source:MGI Symbol;Acc:MGI:1915587]
4. Ubr4 ENSMUSG00000066036 3260 1.68 - 0.950 - - 0.730 - ubiquitin protein ligase E3 component n-recognin 4 [Source:MGI Symbol;Acc:MGI:1916366]
5. Pepd ENSMUSG00000063931 3963 1.649 - 0.923 - - 0.726 - peptidase D [Source:MGI Symbol;Acc:MGI:97542]
6. E130311K13Rik ENSMUSG00000048581 4352 1 1.000 - - - - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
7. Nudcd3 ENSMUSG00000053838 4641 1 1.000 - - - - - NudC domain containing 3 [Source:MGI Symbol;Acc:MGI:2144158]
8. Zeb2 ENSMUSG00000026872 5611 1 1.000 - - - - - zinc finger E-box binding homeobox 2 [Source:MGI Symbol;Acc:MGI:1344407]
9. Snd1 ENSMUSG00000001424 7054 1 1.000 - - - - - staphylococcal nuclease and tudor domain containing 1 [Source:MGI Symbol;Acc:MGI:1929266]
10. Ell ENSMUSG00000070002 2934 1 1.000 - - - - - elongation factor RNA polymerase II [Source:MGI Symbol;Acc:MGI:109377]
11. Nexn ENSMUSG00000039103 2837 1 1.000 - - - - - nexilin [Source:MGI Symbol;Acc:MGI:1916060]
12. Eps15 ENSMUSG00000028552 3437 1 1.000 - - - - - epidermal growth factor receptor pathway substrate 15 [Source:MGI Symbol;Acc:MGI:104583]
13. Rad51 ENSMUSG00000027323 4863 1 1.000 - - - - - RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890]
14. Mcc ENSMUSG00000071856 4024 1 1.000 - - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
15. Capn7 ENSMUSG00000021893 3215 1 1.000 - - - - - calpain 7 [Source:MGI Symbol;Acc:MGI:1338030]
16. Tspo ENSMUSG00000041736 2960 1 1.000 - - - - - translocator protein [Source:MGI Symbol;Acc:MGI:88222]
17. Vkorc1 ENSMUSG00000096145 6414 1 1.000 - - - - - vitamin K epoxide reductase complex, subunit 1 [Source:MGI Symbol;Acc:MGI:106442]
18. Fam151b ENSMUSG00000034334 2211 1 1.000 - - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
19. Eif4e2 ENSMUSG00000026254 9053 0.999 0.999 - - - - - eukaryotic translation initiation factor 4E member 2 [Source:MGI Symbol;Acc:MGI:1914440]
20. Drosha ENSMUSG00000022191 6681 0.999 0.999 - - - - - drosha, ribonuclease type III [Source:MGI Symbol;Acc:MGI:1261425]
21. Amot ENSMUSG00000041688 7133 0.999 0.999 - - - - - angiomotin [Source:MGI Symbol;Acc:MGI:108440]
22. Gtf2i ENSMUSG00000060261 13970 0.999 0.999 - - - - - general transcription factor II I [Source:MGI Symbol;Acc:MGI:1202722]
23. Rfk ENSMUSG00000024712 5316 0.999 0.999 - - - - - riboflavin kinase [Source:MGI Symbol;Acc:MGI:1914688]
24. Dpf2 ENSMUSG00000024826 10503 0.998 0.998 - - - - - D4, zinc and double PHD fingers family 2 [Source:MGI Symbol;Acc:MGI:109529]
25. Sdk2 ENSMUSG00000041592 3074 0.998 0.998 - - - - - sidekick cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:2443847]
26. Ncl ENSMUSG00000026234 29206 0.997 0.997 - - - - - nucleolin [Source:MGI Symbol;Acc:MGI:97286]
27. Psme3 ENSMUSG00000078652 16638 0.996 0.996 - - - - - proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) [Source:MGI Symbol;Acc:MGI:1096366]
28. Crabp1 ENSMUSG00000032291 40831 0.995 0.995 - - - - - cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
29. Actc1 ENSMUSG00000068614 13555 0.995 0.995 - - - - - actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
30. Cox6b1 ENSMUSG00000036751 12215 0.995 0.995 - - - - - cytochrome c oxidase, subunit 6B1 [Source:MGI Symbol;Acc:MGI:107460]
31. Gna13 ENSMUSG00000020611 6315 0.995 0.995 - - - - - guanine nucleotide binding protein, alpha 13 [Source:MGI Symbol;Acc:MGI:95768]
32. Chd4 ENSMUSG00000063870 11560 0.992 0.992 - - - - - chromodomain helicase DNA binding protein 4 [Source:MGI Symbol;Acc:MGI:1344380]
33. Nomo1 ENSMUSG00000030835 5074 0.992 0.992 - - - - - nodal modulator 1 [Source:MGI Symbol;Acc:MGI:2385850]
34. Rsl1d1 ENSMUSG00000005846 6507 0.987 0.987 - - - - - ribosomal L1 domain containing 1 [Source:MGI Symbol;Acc:MGI:1913659]
35. Cnpy2 ENSMUSG00000025381 4468 0.986 - 0.986 - - - - canopy FGF signaling regulator 2 [Source:MGI Symbol;Acc:MGI:1928477]
36. Tbc1d7 ENSMUSG00000021368 930 0.986 - 0.986 - - - - TBC1 domain family, member 7 [Source:MGI Symbol;Acc:MGI:1914296]
37. Cd24a ENSMUSG00000047139 33769 0.984 0.984 - - - - - CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
38. Cpsf3l 1764 0.984 - 0.984 - - - - cleavage and polyadenylation specific factor 3-like, transcript variant X2
39. Eef1e1 ENSMUSG00000001707 2763 0.984 - 0.984 - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:MGI Symbol;Acc:MGI:1913393]
40. Cdc42 ENSMUSG00000006699 28155 0.981 0.981 - - - - - cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
41. Phb2 ENSMUSG00000004264 4535 0.98 - 0.980 - - - - prohibitin 2 [Source:MGI Symbol;Acc:MGI:102520]
42. U2af2 ENSMUSG00000030435 49812 0.977 0.977 - - - - - U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
43. Prpf18 ENSMUSG00000039449 1985 0.976 - 0.976 - - - - pre-mRNA processing factor 18 [Source:MGI Symbol;Acc:MGI:1914479]
44. Tmx3 ENSMUSG00000024614 1503 0.972 - 0.972 - - - - thioredoxin-related transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:2442418]
45. Ctse ENSMUSG00000004552 552 0.971 - 0.971 - - - - cathepsin E [Source:MGI Symbol;Acc:MGI:107361]
46. Neurl3 ENSMUSG00000047180 402 0.971 - 0.971 - - - - neuralized E3 ubiquitin protein ligase 3 [Source:MGI Symbol;Acc:MGI:2429944]
47. Stx16 ENSMUSG00000027522 2813 0.971 - 0.971 - - - - syntaxin 16 [Source:MGI Symbol;Acc:MGI:1923396]
48. Gm22906 ENSMUSG00000092932 830 0.971 - 0.971 - - - - predicted gene, 22906 [Source:MGI Symbol;Acc:MGI:5452683]
49. Hnf4a ENSMUSG00000017950 358 0.971 - 0.971 - - - - hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]
50. Mast3 ENSMUSG00000031833, ENSMUSG00000110763 679 0.971 - 0.971 - - - - microtubule associated serine/threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2683541]
51. Jrk ENSMUSG00000046380 696 0.97 - 0.970 - - - - jerky [Source:MGI Symbol;Acc:MGI:106214]
52. 1700021K19Rik 1700021K19Rik 830 0.97 - 0.970 - - - -
53. Gata3 ENSMUSG00000015619 847 0.97 - 0.970 - - - - GATA binding protein 3 [Source:MGI Symbol;Acc:MGI:95663]
54. Armcx4 ENSMUSG00000049804 5793 0.97 - 0.970 - - - - armadillo repeat containing, X-linked 4 [Source:MGI Symbol;Acc:MGI:2147887]
55. Gm14017 ENSMUSG00000081967 689 0.97 - 0.970 - - - - predicted gene 14017 [Source:MGI Symbol;Acc:MGI:3702155]
56. Nit1 ENSMUSG00000013997 660 0.97 - 0.970 - - - - nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
57. Tox2 ENSMUSG00000074607 717 0.969 - 0.969 - - - - TOX high mobility group box family member 2 [Source:MGI Symbol;Acc:MGI:3611233]
58. Atpaf2 ENSMUSG00000042709 993 0.969 - 0.969 - - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:2180561]
59. Thoc6 ENSMUSG00000041319 1276 0.969 - 0.969 - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
60. Trafd1 ENSMUSG00000042726 1594 0.969 - 0.969 - - - - TRAF type zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1923551]
61. Plce1 ENSMUSG00000024998 1051 0.969 - 0.969 - - - - phospholipase C, epsilon 1 [Source:MGI Symbol;Acc:MGI:1921305]
62. Map3k2 ENSMUSG00000024383 1064 0.969 - 0.969 - - - - mitogen-activated protein kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346873]
63. Fbxo33 ENSMUSG00000035329 946 0.969 - 0.969 - - - - F-box protein 33 [Source:MGI Symbol;Acc:MGI:1917861]
64. Zfp825 ENSMUSG00000069208 1108 0.969 - 0.969 - - - - zinc finger protein 825 [Source:MGI Symbol;Acc:MGI:2385315]
65. Adamts3 ENSMUSG00000043635 540 0.969 - 0.969 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 [Source:MGI Symbol;Acc:MGI:3045353]
66. Lrrfip2 ENSMUSG00000032497 1432 0.968 - 0.968 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:MGI Symbol;Acc:MGI:1918518]
67. Gdpd1 ENSMUSG00000061666 1642 0.968 - 0.968 - - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913819]
68. Ube4a ENSMUSG00000059890 1421 0.968 - 0.968 - - - - ubiquitination factor E4A [Source:MGI Symbol;Acc:MGI:2154580]
69. Cep135 ENSMUSG00000036403 1133 0.968 - 0.968 - - - - centrosomal protein 135 [Source:MGI Symbol;Acc:MGI:2681869]
70. Nfatc4 ENSMUSG00000023411 1084 0.968 - 0.968 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 [Source:MGI Symbol;Acc:MGI:1920431]
71. 0610011F06Rik 1655 0.968 - 0.968 - - - - RIKEN cDNA 0610011F06 gene
72. Myo9b ENSMUSG00000004677 902 0.967 - 0.967 - - - - myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
73. Vamp2 ENSMUSG00000020894 1819 0.966 - 0.966 - - - - vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
74. Samd10 ENSMUSG00000038605 1636 0.966 - 0.966 - - - - sterile alpha motif domain containing 10 [Source:MGI Symbol;Acc:MGI:2443872]
75. Fubp3 ENSMUSG00000026843 2442 0.966 - 0.966 - - - - far upstream element (FUSE) binding protein 3 [Source:MGI Symbol;Acc:MGI:2443699]
76. Zfp81 ENSMUSG00000003929 1819 0.966 - 0.966 - - - - zinc finger protein 81 [Source:MGI Symbol;Acc:MGI:1890752]
77. Rnf168 ENSMUSG00000014074 2298 0.965 - 0.965 - - - - ring finger protein 168 [Source:MGI Symbol;Acc:MGI:1917488]
78. Ranbp10 ENSMUSG00000037415 1474 0.964 - 0.964 - - - - RAN binding protein 10 [Source:MGI Symbol;Acc:MGI:1921584]
79. Dpp3 ENSMUSG00000063904 4642 0.964 - 0.964 - - - - dipeptidylpeptidase 3 [Source:MGI Symbol;Acc:MGI:1922471]
80. Tbc1d9b ENSMUSG00000036644 1557 0.964 - 0.964 - - - - TBC1 domain family, member 9B [Source:MGI Symbol;Acc:MGI:1924045]
81. Gcn1l1 ENSMUSG00000041638 2104 0.964 - 0.964 - - - - GCN1 general control of amino-acid synthesis 1-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:2444248]
82. Pfkl ENSMUSG00000020277 2200 0.963 - 0.963 - - - - phosphofructokinase, liver, B-type [Source:MGI Symbol;Acc:MGI:97547]
83. Mrps25 ENSMUSG00000014551 1972 0.963 - 0.963 - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
84. Gm26905 ENSMUSG00000097695 6535 0.963 - 0.963 - - - - predicted gene, 26905 [Source:MGI Symbol;Acc:MGI:5477399]
85. Uvssa ENSMUSG00000037355 1218 0.963 - 0.963 - - - - UV stimulated scaffold protein A [Source:MGI Symbol;Acc:MGI:1918351]
86. Bach1 ENSMUSG00000025612 3433 0.963 - 0.963 - - - - BTB and CNC homology 1, basic leucine zipper transcription factor 1 [Source:MGI Symbol;Acc:MGI:894680]
87. Efna4 ENSMUSG00000028040 2079 0.963 - 0.963 - - - - ephrin A4 [Source:MGI Symbol;Acc:MGI:106643]
88. Sh3bp5 ENSMUSG00000021892 2847 0.963 - 0.963 - - - - SH3-domain binding protein 5 (BTK-associated) [Source:MGI Symbol;Acc:MGI:1344391]
89. Cramp1l ENSMUSG00000038002 2785 0.963 - 0.963 - - - - cramped chromatin regulator homolog 1 [Source:MGI Symbol;Acc:MGI:1930190]
90. Tomm40 ENSMUSG00000002984 3250 0.962 - 0.962 - - - - translocase of outer mitochondrial membrane 40 [Source:MGI Symbol;Acc:MGI:1858259]
91. Rab5c ENSMUSG00000019173 2129 0.962 - 0.962 - - - - RAB5C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105306]
92. Rpl39-ps ENSMUSG00000036305 39280 0.962 0.962 - - - - - ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
93. Papss1 ENSMUSG00000028032 2736 0.962 - 0.962 - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:MGI Symbol;Acc:MGI:1330587]
94. Pttg1ip ENSMUSG00000009291 2159 0.962 - 0.962 - - - - pituitary tumor-transforming 1 interacting protein [Source:MGI Symbol;Acc:MGI:2652132]
95. Mapkap1 ENSMUSG00000038696 3140 0.961 - 0.961 - - - - mitogen-activated protein kinase associated protein 1 [Source:MGI Symbol;Acc:MGI:2444554]
96. Ccdc9 ENSMUSG00000041375 2256 0.961 - 0.961 - - - - coiled-coil domain containing 9 [Source:MGI Symbol;Acc:MGI:1921443]
97. Baz2a ENSMUSG00000040054 1653 0.96 - 0.960 - - - - bromodomain adjacent to zinc finger domain, 2A [Source:MGI Symbol;Acc:MGI:2151152]
98. Matr3 ENSMUSG00000037236 11220 0.96 - 0.960 - - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
99. Cwc15 ENSMUSG00000004096 5974 0.96 - 0.960 - - - - CWC15 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1913320]
100. Gm1673 ENSMUSG00000070858 2674 0.959 - 0.959 - - - - predicted gene 1673 [Source:MGI Symbol;Acc:MGI:2686519]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA