Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Msh5

Gene Name Gene ID Reads Annotation
Msh5 ENSMUSG00000007035 89 mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]







Genes with expression patterns similar to Msh5

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Msh5 ENSMUSG00000007035 89 6 1.000 1.000 1.000 1.000 1.000 1.000 mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]
2. Gm17108 ENSMUSG00000091133 29 1.68 - 0.881 0.799 - - - predicted gene 17108 [Source:MGI Symbol;Acc:MGI:4937935]
3. Gm12657 ENSMUSG00000063314 79 1.642 - 0.856 0.786 - - - predicted gene 12657 [Source:MGI Symbol;Acc:MGI:3651714]
4. 1700112E06Rik 52 1.624 - 0.874 0.750 - - - RIKEN cDNA 1700112E06 gene, transcript variant X4
5. Asah2 ENSMUSG00000024887 54 1.431 - - 0.721 - - 0.710 N-acylsphingosine amidohydrolase 2 [Source:MGI Symbol;Acc:MGI:1859310]
6. Bace2 ENSMUSG00000040605 132 0.908 - 0.908 - - - - beta-site APP-cleaving enzyme 2 [Source:MGI Symbol;Acc:MGI:1860440]
7. Igsf10 ENSMUSG00000036334 133 0.9 - - - - - 0.900 immunoglobulin superfamily, member 10 [Source:MGI Symbol;Acc:MGI:1923481]
8. 6330403A02Rik 6330403A02Rik 84 0.9 - - 0.900 - - -
9. Col9a3 ENSMUSG00000027570 98 0.9 - 0.900 - - - - collagen, type IX, alpha 3 [Source:MGI Symbol;Acc:MGI:894686]
10. Gm22767 ENSMUSG00000088990 25 0.896 - 0.896 - - - - predicted gene, 22767 [Source:MGI Symbol;Acc:MGI:5452544]
11. Pnpo ENSMUSG00000018659 322 0.89 - 0.890 - - - - pyridoxine 5'-phosphate oxidase [Source:MGI Symbol;Acc:MGI:2144151]
12. Kcna6 ENSMUSG00000038077 132 0.89 - 0.890 - - - - potassium voltage-gated channel, shaker-related, subfamily, member 6 [Source:MGI Symbol;Acc:MGI:96663]
13. Gm2026 ENSMUSG00000078886 27 0.889 - 0.889 - - - - predicted gene 2026 [Source:MGI Symbol;Acc:MGI:3780195]
14. Pcdh10 ENSMUSG00000049100 172 0.889 - 0.889 - - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
15. 1810062O18Rik ENSMUSG00000084925 34 0.885 - 0.885 - - - - RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
16. Prl2c1 ENSMUSG00000062551 9 0.884 - 0.884 - - - - Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
17. Irs3 ENSMUSG00000047182 11 0.884 - 0.884 - - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
18. 9130230N09Rik ENSMUSG00000092626 12 0.884 - 0.884 - - - - RIKEN cDNA 9130230N09 gene [Source:MGI Symbol;Acc:MGI:1924921]
19. Gm12367 ENSMUSG00000084828 11 0.884 - 0.884 - - - - predicted gene 12367 [Source:MGI Symbol;Acc:MGI:3649554]
20. Gm16020 ENSMUSG00000072576 11 0.884 - 0.884 - - - - predicted gene 16020 [Source:MGI Symbol;Acc:MGI:3801865]
21. Nxt2 ENSMUSG00000042271 400 0.882 - - 0.882 - - - nuclear transport factor 2-like export factor 2 [Source:MGI Symbol;Acc:MGI:2147914]
22. Gm12198 ENSMUSG00000085564 18 0.881 - 0.881 - - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
23. Il1r2 ENSMUSG00000026073 26 0.881 - 0.881 - - - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
24. 1700026L06Rik 1700026L06Rik 37 0.88 - 0.880 - - - -
25. Rspo1 ENSMUSG00000028871 365 0.88 - 0.880 - - - - R-spondin 1 [Source:MGI Symbol;Acc:MGI:2183426]
26. Gm8129 ENSMUSG00000059159 76 0.879 - 0.879 - - - - predicted pseudogene 8129 [Source:MGI Symbol;Acc:MGI:3646863]
27. Gm10736 ENSMUSG00000096842 39 0.878 - 0.878 - - - - predicted gene 10736 [Source:MGI Symbol;Acc:MGI:3704412]
28. Kctd10 ENSMUSG00000001098 136 0.877 - 0.877 - - - - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
29. 5930422O12Rik ENSMUSG00000048544 74 0.876 - 0.876 - - - - RIKEN cDNA 5930422O12 gene [Source:MGI Symbol;Acc:MGI:2442538]
30. Gm10155 ENSMUSG00000066180 21 0.876 - 0.876 - - - - predicted gene 10155 [Source:MGI Symbol;Acc:MGI:3642914]
31. C030013C21Rik ENSMUSG00000085078 24 0.876 - 0.876 - - - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
32. Stap1 ENSMUSG00000029254 13 0.875 - 0.875 - - - - signal transducing adaptor family member 1 [Source:MGI Symbol;Acc:MGI:1926193]
33. Myh7b ENSMUSG00000074652 24 0.87 - - - - - 0.870 myosin, heavy chain 7B, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:3710243]
34. Tomm6 ENSMUSG00000033475 42 0.87 - 0.870 - - - - translocase of outer mitochondrial membrane 6 [Source:MGI Symbol;Acc:MGI:1913369]
35. St14 ENSMUSG00000031995 31 0.868 - 0.868 - - - - suppression of tumorigenicity 14 (colon carcinoma) [Source:MGI Symbol;Acc:MGI:1338881]
36. 1700016K19Rik ENSMUSG00000053783 24 0.866 - 0.866 - - - - RIKEN cDNA 1700016K19 gene [Source:MGI Symbol;Acc:MGI:1921480]
37. Gfod1 ENSMUSG00000051335 46 0.865 - 0.865 - - - - glucose-fructose oxidoreductase domain containing 1 [Source:MGI Symbol;Acc:MGI:2145304]
38. Gm12577 ENSMUSG00000083834 78 0.865 - 0.865 - - - - predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
39. 6030443J06Rik ENSMUSG00000097207 38 0.863 - 0.863 - - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
40. Cacnb2 ENSMUSG00000057914 107 0.862 - 0.862 - - - - calcium channel, voltage-dependent, beta 2 subunit [Source:MGI Symbol;Acc:MGI:894644]
41. Gm25776 ENSMUSG00000080365 59 0.862 - 0.862 - - - - predicted gene, 25776 [Source:MGI Symbol;Acc:MGI:5455553]
42. Myo1f ENSMUSG00000024300 181 0.862 - 0.862 - - - - myosin IF [Source:MGI Symbol;Acc:MGI:107711]
43. AA474331 AA474331 111 0.86 - 0.860 - - - -
44. 2310007B03Rik ENSMUSG00000034159 31 0.859 - 0.859 - - - - RIKEN cDNA 2310007B03 gene [Source:MGI Symbol;Acc:MGI:1919124]
45. MIMT1 MIMT1 23 0.857 - 0.857 - - - -
46. Mocs3 ENSMUSG00000074576 94 0.855 - 0.855 - - - - molybdenum cofactor synthesis 3 [Source:MGI Symbol;Acc:MGI:1916622]
47. Hoxd11 ENSMUSG00000042499 16 0.854 - 0.854 - - - - homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
48. Gm22 71 0.851 - 0.851 - - - - predicted gene 22, transcript variant X1
49. Zfp956 ENSMUSG00000045466 81 0.85 - 0.850 - - - - zinc finger protein 956 [Source:MGI Symbol;Acc:MGI:2141515]
50. Gm16907 ENSMUSG00000097242 72 0.85 - 0.850 - - - - predicted gene, 16907 [Source:MGI Symbol;Acc:MGI:4439831]
51. Rpl35 ENSMUSG00000062997 54 0.849 - 0.849 - - - - ribosomal protein L35 [Source:MGI Symbol;Acc:MGI:1913739]
52. Nipal2 ENSMUSG00000038879 37 0.847 - 0.847 - - - - NIPA-like domain containing 2 [Source:MGI Symbol;Acc:MGI:1924488]
53. Gm5595 249 0.846 - 0.846 - - - - predicted gene 5595
54. 1810013D15Rik ENSMUSG00000028177 15 0.845 - - 0.845 - - - RIKEN cDNA 1810013D15 gene [Source:MGI Symbol;Acc:MGI:1916292]
55. Ncoa4 ENSMUSG00000056234 40 0.844 - 0.844 - - - - nuclear receptor coactivator 4 [Source:MGI Symbol;Acc:MGI:1350932]
56. Rgs18 ENSMUSG00000026357 156 0.843 - - - - 0.843 - regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
57. Col9a2 ENSMUSG00000028626 672 0.843 - 0.843 - - - - collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]
58. Hist2h2be ENSMUSG00000068854 501 0.843 - 0.843 - - - - histone cluster 2, H2be [Source:MGI Symbol;Acc:MGI:2448415]
59. Gm13589 ENSMUSG00000085950 206 0.84 - 0.840 - - - - predicted gene 13589 [Source:MGI Symbol;Acc:MGI:3649991]
60. St6gal2 ENSMUSG00000024172, ENSMUSG00000098633 202 0.839 - - 0.839 - - - beta galactoside alpha 2,6 sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:2445190]
61. Lrrc8e ENSMUSG00000046589 169 0.838 - 0.838 - - - - leucine rich repeat containing 8 family, member E [Source:MGI Symbol;Acc:MGI:1919517]
62. Ak5 ENSMUSG00000039058 89 0.834 - 0.834 - - - - adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
63. Gm14325 ENSMUSG00000095362 531 0.833 - 0.833 - - - - predicted gene 14325 [Source:MGI Symbol;Acc:MGI:3702875]
64. Col8a2 ENSMUSG00000056174 221 0.833 - 0.833 - - - - collagen, type VIII, alpha 2 [Source:MGI Symbol;Acc:MGI:88464]
65. Gm15727 ENSMUSG00000081274 6 0.832 - - 0.832 - - - predicted gene 15727 [Source:MGI Symbol;Acc:MGI:3783170]
66. Zfp641 ENSMUSG00000022987 31 0.831 - - 0.831 - - - zinc finger protein 641 [Source:MGI Symbol;Acc:MGI:2442788]
67. Mitf ENSMUSG00000035158 96 0.831 - 0.831 - - - - melanogenesis associated transcription factor [Source:MGI Symbol;Acc:MGI:104554]
68. Gm15401 ENSMUSG00000072999 54 0.83 - 0.830 - - - - predicted gene 15401 [Source:MGI Symbol;Acc:MGI:3642201]
69. Zfp11 ENSMUSG00000051034 218 0.829 - - 0.829 - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
70. Gm16221 ENSMUSG00000082234 99 0.827 - 0.827 - - - - predicted gene 16221 [Source:MGI Symbol;Acc:MGI:3802147]
71. Lect2 ENSMUSG00000021539 23 0.827 - - - - 0.827 - leukocyte cell-derived chemotaxin 2 [Source:MGI Symbol;Acc:MGI:1278342]
72. Rpl30-ps3 ENSMUSG00000080873 111 0.827 - 0.827 - - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
73. Gm24187 ENSMUSG00000088609 210 0.826 - 0.826 - - - - predicted gene, 24187 [Source:MGI Symbol;Acc:MGI:5453964]
74. Adrb1 ENSMUSG00000035283 12 0.826 - - 0.826 - - - adrenergic receptor, beta 1 [Source:MGI Symbol;Acc:MGI:87937]
75. Pou4f2 ENSMUSG00000031688 28 0.824 - - 0.824 - - - POU domain, class 4, transcription factor 2 [Source:MGI Symbol;Acc:MGI:102524]
76. Rpl35a-ps5 ENSMUSG00000093885 16 0.823 - - 0.823 - - - ribosomal protein L35A, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3704247]
77. Zfp433 ENSMUSG00000096795 63 0.821 - - 0.821 - - - zinc finger protein 433 [Source:MGI Symbol;Acc:MGI:1920860]
78. Bin2 ENSMUSG00000098112 317 0.821 - 0.821 - - - - bridging integrator 2 [Source:MGI Symbol;Acc:MGI:3611448]
79. Gm26606 ENSMUSG00000097337 23 0.819 - - - - - 0.819 predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
80. Fgf10 ENSMUSG00000021732 520 0.818 - 0.818 - - - - fibroblast growth factor 10 [Source:MGI Symbol;Acc:MGI:1099809]
81. 5730422E09Rik ENSMUSG00000097191 32 0.817 - - 0.817 - - - RIKEN cDNA 5730422E09 gene [Source:MGI Symbol;Acc:MGI:1917793]
82. Gm16238 ENSMUSG00000089988 17 0.815 - - 0.815 - - - predicted gene 16238 [Source:MGI Symbol;Acc:MGI:3802104]
83. Tmem150a ENSMUSG00000055912, ENSMUSG00000102455 471 0.815 - 0.815 - - - - transmembrane protein 150A [Source:MGI Symbol;Acc:MGI:2385244]
84. 4930470G03Rik ENSMUSG00000085788 23 0.815 - - 0.815 - - - RIKEN cDNA 4930470G03 gene [Source:MGI Symbol;Acc:MGI:1922171]
85. Gm15366 ENSMUSG00000080726 11 0.814 - - - - - 0.814 predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
86. Capn15 ENSMUSG00000037326 23 0.814 - - - - - 0.814 calpain 15 [Source:MGI Symbol;Acc:MGI:1355075]
87. Plcd4 ENSMUSG00000026173 6 0.814 - - - - - 0.814 phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
88. D5Ertd577e ENSMUSG00000070677 7 0.814 - - - - - 0.814 DNA segment, Chr 5, ERATO Doi 577, expressed [Source:MGI Symbol;Acc:MGI:1261918]
89. Gm22299 ENSMUSG00000064597, ENSMUSG00000116186 14 0.814 - - - - - 0.814 predicted gene, 22299 [Source:MGI Symbol;Acc:MGI:5452076]
90. 4921513D11Rik 4921513D11Rik 4 0.814 - - 0.814 - - -
91. Skint7 ENSMUSG00000049214 6 0.814 - - 0.814 - - - selection and upkeep of intraepithelial T cells 7 [Source:MGI Symbol;Acc:MGI:3041190]
92. Btn2a2 ENSMUSG00000053216 12 0.814 - - 0.814 - - - butyrophilin, subfamily 2, member A2 [Source:MGI Symbol;Acc:MGI:3606486]
93. Gm13604 ENSMUSG00000083910 10 0.814 - - - - - 0.814 predicted gene 13604 [Source:MGI Symbol;Acc:MGI:3652203]
94. Dnah5 ENSMUSG00000022262 9 0.814 - - 0.814 - - - dynein, axonemal, heavy chain 5 [Source:MGI Symbol;Acc:MGI:107718]
95. 3110099E03Rik ENSMUSG00000085582 57 0.814 - - - - - 0.814 RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
96. Gm27001 ENSMUSG00000097963 3 0.814 - - - - - 0.814 predicted gene, 27001 [Source:MGI Symbol;Acc:MGI:5504116]
97. Kcnv2 ENSMUSG00000047298 8 0.814 - - 0.814 - - - potassium channel, subfamily V, member 2 [Source:MGI Symbol;Acc:MGI:2670981]
98. Gm12891 ENSMUSG00000080929 3 0.814 - - 0.814 - - - predicted gene 12891 [Source:MGI Symbol;Acc:MGI:3649646]
99. S100g ENSMUSG00000040808 7 0.814 - - 0.814 - - - S100 calcium binding protein G [Source:MGI Symbol;Acc:MGI:104528]
100. Gm2108 ENSMUSG00000092031 8 0.814 - - - - - 0.814 predicted gene 2108 [Source:MGI Symbol;Acc:MGI:3780276]

There are 222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA