Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Msc

Gene Name Gene ID Reads Annotation
Msc ENSMUSG00000025930 30 musculin [Source:MGI Symbol;Acc:MGI:1333884]







Genes with expression patterns similar to Msc

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Msc ENSMUSG00000025930 30 6 1.000 1.000 1.000 1.000 1.000 1.000 musculin [Source:MGI Symbol;Acc:MGI:1333884]
2. Hcrtr2 ENSMUSG00000032360 19 1.841 - - 0.936 0.905 - - hypocretin (orexin) receptor 2 [Source:MGI Symbol;Acc:MGI:2680765]
3. Clec7a ENSMUSG00000079293 35 1.641 - - 0.766 0.875 - - C-type lectin domain family 7, member a [Source:MGI Symbol;Acc:MGI:1861431]
4. Gm13056 ENSMUSG00000085395 13 0.943 - - 0.943 - - - predicted gene 13056 [Source:MGI Symbol;Acc:MGI:3650725]
5. Gm14951 ENSMUSG00000084776 22 0.942 - - 0.942 - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
6. 2310042E22Rik 2310042E22Rik 17 0.942 - - 0.942 - - -
7. Ugt3a2 ENSMUSG00000049152 5 0.942 - - 0.942 - - - UDP glycosyltransferases 3 family, polypeptide A2 [Source:MGI Symbol;Acc:MGI:2145969]
8. Gm25541 ENSMUSG00000080538 21 0.942 - - 0.942 - - - predicted gene, 25541 [Source:MGI Symbol;Acc:MGI:5455318]
9. Gm12295 ENSMUSG00000085162 3 0.942 - - 0.942 - - - predicted gene 12295 [Source:MGI Symbol;Acc:MGI:3650535]
10. Gm773 ENSMUSG00000073177 2 0.942 - - 0.942 - - - predicted gene 773 [Source:MGI Symbol;Acc:MGI:2685619]
11. Gm11370 ENSMUSG00000081905 2 0.942 - - 0.942 - - - predicted gene 11370 [Source:MGI Symbol;Acc:MGI:3651832]
12. Gm22257 ENSMUSG00000089312 2 0.942 - - 0.942 - - - predicted gene, 22257 [Source:MGI Symbol;Acc:MGI:5452034]
13. Dupd1 ENSMUSG00000063821 7 0.942 - - 0.942 - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:MGI Symbol;Acc:MGI:3647127]
14. Prl8a6 ENSMUSG00000021345 4 0.942 - - 0.942 - - - prolactin family 8, subfamily a, member 6 [Source:MGI Symbol;Acc:MGI:1332225]
15. Gm20628 ENSMUSG00000093656 3 0.942 - - 0.942 - - - predicted gene 20628 [Source:MGI Symbol;Acc:MGI:5313075]
16. 1700057H21Rik ENSMUSG00000086007 2 0.942 - - 0.942 - - - RIKEN cDNA 1700057H21 gene [Source:MGI Symbol;Acc:MGI:1920625]
17. Lrrc25 ENSMUSG00000049988 4 0.94 - - 0.940 - - - leucine rich repeat containing 25 [Source:MGI Symbol;Acc:MGI:2445284]
18. Fcna ENSMUSG00000026938 10 0.94 - - 0.940 - - - ficolin A [Source:MGI Symbol;Acc:MGI:1340905]
19. Pirb ENSMUSG00000058818 16 0.939 - - 0.939 - - - paired Ig-like receptor B [Source:MGI Symbol;Acc:MGI:894311]
20. Gm7416 ENSMUSG00000084031 7 0.939 - - 0.939 - - - predicted gene 7416 [Source:MGI Symbol;Acc:MGI:3647901]
21. Crhbp ENSMUSG00000021680 29 0.938 - - 0.938 - - - corticotropin releasing hormone binding protein [Source:MGI Symbol;Acc:MGI:88497]
22. Gm23031 ENSMUSG00000088623 9 0.937 - - - 0.937 - - predicted gene, 23031 [Source:MGI Symbol;Acc:MGI:5452808]
23. Gm25520 ENSMUSG00000089014 14 0.936 - - 0.936 - - - predicted gene, 25520 [Source:MGI Symbol;Acc:MGI:5455297]
24. Slc11a1 ENSMUSG00000026177 34 0.935 - - 0.935 - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
25. Gm25313 ENSMUSG00000095738 7 0.933 - - - 0.933 - - predicted gene, 25313 [Source:MGI Symbol;Acc:MGI:5455090]
26. Henmt1 ENSMUSG00000045662 10 0.933 - - - 0.933 - - HEN1 methyltransferase homolog 1 (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1913965]
27. Gm11637 ENSMUSG00000084375 5 0.933 - - - 0.933 - - predicted gene 11637 [Source:MGI Symbol;Acc:MGI:3651875]
28. Npas4 ENSMUSG00000045903 62 0.933 - - 0.933 - - - neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]
29. Gm15620 ENSMUSG00000085202 5 0.933 - - - 0.933 - - predicted gene 15620 [Source:MGI Symbol;Acc:MGI:3783065]
30. Cxcl1 ENSMUSG00000029380 4 0.932 - - 0.932 - - - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
31. Cngb1 ENSMUSG00000031789 4 0.93 - - 0.930 - - - cyclic nucleotide gated channel beta 1 [Source:MGI Symbol;Acc:MGI:2664102]
32. Gm25789 ENSMUSG00000065228 22 0.929 - - 0.929 - - - predicted gene, 25789 [Source:MGI Symbol;Acc:MGI:5455566]
33. RP24-325L16.1 RP24-325L16.1 31 0.927 - - 0.927 - - -
34. Fbxo48 ENSMUSG00000044966 21 0.926 - - - 0.926 - - F-box protein 48 [Source:MGI Symbol;Acc:MGI:2442569]
35. Sprtn ENSMUSG00000031986 4 0.925 - - 0.925 - - - SprT-like N-terminal domain [Source:MGI Symbol;Acc:MGI:2685351]
36. Gm12299 ENSMUSG00000085926 6 0.925 - - - 0.925 - - predicted gene 12299 [Source:MGI Symbol;Acc:MGI:3652304]
37. Gm3558 ENSMUSG00000079364 14 0.924 - - - 0.924 - - predicted gene 3558 [Source:MGI Symbol;Acc:MGI:3781735]
38. Hmgb1-ps3 ENSMUSG00000081455 5 0.921 - - 0.921 - - - high mobility group box 1, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3768539]
39. Hpgds ENSMUSG00000029919 68 0.921 - - 0.921 - - - hematopoietic prostaglandin D synthase [Source:MGI Symbol;Acc:MGI:1859384]
40. Mettl3 ENSMUSG00000022160 30 0.919 - - - 0.919 - - methyltransferase like 3 [Source:MGI Symbol;Acc:MGI:1927165]
41. C030013C21Rik ENSMUSG00000085078 24 0.919 - - - 0.919 - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
42. Gm26771 ENSMUSG00000097250 8 0.917 - - 0.917 - - - predicted gene, 26771 [Source:MGI Symbol;Acc:MGI:5477265]
43. Mettl21e ENSMUSG00000046828 7 0.917 - - 0.917 - - - methyltransferase like 21E [Source:MGI Symbol;Acc:MGI:2685837]
44. Ptpn22 ENSMUSG00000027843 17 0.916 - - 0.916 - - - protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:MGI Symbol;Acc:MGI:107170]
45. Gm17552 ENSMUSG00000097233, ENSMUSG00000097556 8 0.916 - - - 0.916 - - predicted gene, 17552 [Source:MGI Symbol;Acc:MGI:4937186]
46. Gm10182 ENSMUSG00000094627 24 0.915 - - - 0.915 - - predicted pseudogene 10182 [Source:MGI Symbol;Acc:MGI:3704327]
47. Gm20663 ENSMUSG00000093378 49 0.914 - - 0.914 - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
48. Gm26721 ENSMUSG00000096943 22 0.914 - - 0.914 - - - predicted gene, 26721 [Source:MGI Symbol;Acc:MGI:5477215]
49. 9930013L23Rik 9930013L23Rik 21 0.913 - - 0.913 - - -
50. B3gnt9 ENSMUSG00000069920 24 0.913 - - 0.913 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:MGI Symbol;Acc:MGI:2142841]
51. Slc46a2 ENSMUSG00000028386 10 0.911 - - - 0.911 - - solute carrier family 46, member 2 [Source:MGI Symbol;Acc:MGI:1353616]
52. Rasal3 ENSMUSG00000052142 7 0.909 - - 0.909 - - - RAS protein activator like 3 [Source:MGI Symbol;Acc:MGI:2444128]
53. Bmp5 ENSMUSG00000032179 12 0.908 - - 0.908 - - - bone morphogenetic protein 5 [Source:MGI Symbol;Acc:MGI:88181]
54. Tha1 ENSMUSG00000017713 54 0.908 - - - 0.908 - - threonine aldolase 1 [Source:MGI Symbol;Acc:MGI:1919026]
55. Cox6b2 ENSMUSG00000051811 121 0.907 - - 0.907 - - - cytochrome c oxidase subunit 6B2 [Source:MGI Symbol;Acc:MGI:3044182]
56. Gpr35 ENSMUSG00000026271 17 0.905 - - 0.905 - - - G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
57. Popdc3 ENSMUSG00000019848 48 0.901 - - 0.901 - - - popeye domain containing 3 [Source:MGI Symbol;Acc:MGI:1930153]
58. Nod2 ENSMUSG00000055994 12 0.898 - - 0.898 - - - nucleotide-binding oligomerization domain containing 2 [Source:MGI Symbol;Acc:MGI:2429397]
59. Syt12 ENSMUSG00000049303 17 0.895 - - 0.895 - - - synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
60. 6430562O15Rik ENSMUSG00000097828 27 0.894 - - 0.894 - - - RIKEN cDNA 6430562O15 gene [Source:MGI Symbol;Acc:MGI:2444982]
61. E230001N04Rik ENSMUSG00000066170 39 0.893 - - 0.893 - - - RIKEN cDNA E230001N04 gene [Source:MGI Symbol;Acc:MGI:2443549]
62. Gm5239 ENSMUSG00000062742 76 0.892 - - - 0.892 - - predicted pseudogene 5239 [Source:MGI Symbol;Acc:MGI:3648788]
63. Slc52a3 ENSMUSG00000027463 30 0.891 - - 0.891 - - - solute carrier protein family 52, member 3 [Source:MGI Symbol;Acc:MGI:1916948]
64. Pkn1 ENSMUSG00000057672 59 0.89 - - - 0.890 - - protein kinase N1 [Source:MGI Symbol;Acc:MGI:108022]
65. 2410004P03Rik ENSMUSG00000071398 46 0.889 - - - 0.889 - - RIKEN cDNA 2410004P03 gene [Source:MGI Symbol;Acc:MGI:1920917]
66. Lama3 ENSMUSG00000024421 55 0.888 - - 0.888 - - - laminin, alpha 3 [Source:MGI Symbol;Acc:MGI:99909]
67. Gsc2 ENSMUSG00000022738 13 0.887 - - - 0.887 - - goosecoid homebox 2 [Source:MGI Symbol;Acc:MGI:892006]
68. 1810021B22Rik ENSMUSG00000087331 54 0.887 - - 0.887 - - - RIKEN cDNA 1810021B22 gene [Source:MGI Symbol;Acc:MGI:1916370]
69. Pi4kb ENSMUSG00000038861 97 0.883 - - 0.883 - - - phosphatidylinositol 4-kinase beta [Source:MGI Symbol;Acc:MGI:1334433]
70. Lrrc73 ENSMUSG00000071073 18 0.882 - - 0.882 - - - leucine rich repeat containing 73 [Source:MGI Symbol;Acc:MGI:2684934]
71. Gm11645 ENSMUSG00000080895 26 0.881 - - 0.881 - - - predicted gene 11645 [Source:MGI Symbol;Acc:MGI:3652133]
72. Tmem179 ENSMUSG00000054013 29 0.88 - - - 0.880 - - transmembrane protein 179 [Source:MGI Symbol;Acc:MGI:2144891]
73. 2010015L04Rik 2010015L04Rik 37 0.877 - - 0.877 - - -
74. AI118078 AI118078 5 0.876 - - - - 0.876 -
75. Gm13657 ENSMUSG00000086813 15 0.875 - - 0.875 - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
76. Gm4787 ENSMUSG00000072974 15 0.871 - - 0.871 - - - predicted gene 4787 [Source:MGI Symbol;Acc:MGI:3646380]
77. 4930570G19Rik ENSMUSG00000085084 34 0.871 - - 0.871 - - - RIKEN cDNA 4930570G19 gene [Source:MGI Symbol;Acc:MGI:1923158]
78. A2m ENSMUSG00000030111 38 0.869 - - 0.869 - - - alpha-2-macroglobulin [Source:MGI Symbol;Acc:MGI:2449119]
79. Nr1h3 ENSMUSG00000002108 35 0.868 - - 0.868 - - - nuclear receptor subfamily 1, group H, member 3 [Source:MGI Symbol;Acc:MGI:1352462]
80. Ccl6 ENSMUSG00000018927 44 0.866 - - - 0.866 - - chemokine (C-C motif) ligand 6 [Source:MGI Symbol;Acc:MGI:98263]
81. Rgs9bp ENSMUSG00000056043 113 0.866 - - - 0.866 - - regulator of G-protein signalling 9 binding protein [Source:MGI Symbol;Acc:MGI:2384418]
82. Gpr12 ENSMUSG00000041468 30 0.865 - - - 0.865 - - G-protein coupled receptor 12 [Source:MGI Symbol;Acc:MGI:101909]
83. Gm17315 ENSMUSG00000097791 47 0.864 - - - 0.864 - - predicted gene, 17315 [Source:MGI Symbol;Acc:MGI:4936949]
84. Cdh9 ENSMUSG00000025370 9 0.863 - - 0.863 - - - cadherin 9 [Source:MGI Symbol;Acc:MGI:107433]
85. D130040H23Rik ENSMUSG00000079038 18 0.861 - - 0.861 - - - RIKEN cDNA D130040H23 gene [Source:MGI Symbol;Acc:MGI:2444324]
86. E530011L22Rik ENSMUSG00000097820 57 0.861 - - - 0.861 - - RIKEN cDNA E530011L22 gene [Source:MGI Symbol;Acc:MGI:2443770]
87. Gm25394 ENSMUSG00000087963 22 0.86 - - - 0.860 - - predicted gene, 25394 [Source:MGI Symbol;Acc:MGI:5455171]
88. Gm27042 ENSMUSG00000097792 33 0.859 - - 0.859 - - - predicted gene, 27042 [Source:MGI Symbol;Acc:MGI:5504157]
89. Thap1 ENSMUSG00000037214 256 0.859 - - 0.859 - - - THAP domain containing, apoptosis associated protein 1 [Source:MGI Symbol;Acc:MGI:1921004]
90. Gm14326 ENSMUSG00000078862 130 0.859 - - - 0.859 - - predicted gene 14326 [Source:MGI Symbol;Acc:MGI:3709298]
91. Gm26631 ENSMUSG00000097445 22 0.857 - - 0.857 - - - predicted gene, 26631 [Source:MGI Symbol;Acc:MGI:5477125]
92. Gm15530 ENSMUSG00000081651 13 0.857 - - 0.857 - - - predicted gene 15530 [Source:MGI Symbol;Acc:MGI:3782978]
93. C3ar1 ENSMUSG00000040552 119 0.853 - - 0.853 - - - complement component 3a receptor 1 [Source:MGI Symbol;Acc:MGI:1097680]
94. Satb2 ENSMUSG00000038331 158 0.853 - - - 0.853 - - special AT-rich sequence binding protein 2 [Source:MGI Symbol;Acc:MGI:2679336]
95. Vps25 ENSMUSG00000078656 14 0.853 - - 0.853 - - - vacuolar protein sorting 25 [Source:MGI Symbol;Acc:MGI:106354]
96. Steap3 ENSMUSG00000026389 20 0.849 - - 0.849 - - - STEAP family member 3 [Source:MGI Symbol;Acc:MGI:1915678]
97. Gm5898 ENSMUSG00000081788 45 0.847 - - 0.847 - - - predicted gene 5898 [Source:MGI Symbol;Acc:MGI:3644921]
98. Gm15559 ENSMUSG00000086401 9 0.847 0.847 - - - - - predicted gene 15559 [Source:MGI Symbol;Acc:MGI:3783008]
99. Tmigd1 ENSMUSG00000020839 18 0.846 - - 0.846 - - - transmembrane and immunoglobulin domain containing 1 [Source:MGI Symbol;Acc:MGI:1913851]
100. Neu4 ENSMUSG00000034000 2 0.846 - 0.846 - - - - sialidase 4 [Source:MGI Symbol;Acc:MGI:2661364]

There are 213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA