Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP_6

Gene Name Gene ID Reads Annotation
Metazoa_SRP_6 Metazoa_SRP_6 7










Genes with expression patterns similar to Metazoa_SRP_6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Metazoa_SRP_6 Metazoa_SRP_6 7 5 1.000 1.000 1.000 - 1.000 - - - 1.000
2. efhb ENSDARG00000069703 9 2 1.000 - - - 1.000 - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
3. odf3b ENSDARG00000114397, ENSDARG00000116899 21 1.908 0.908 1.000 - - - - - - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
4. trip4 ENSDARG00000098074 79 1.878 0.878 1.000 - - - - - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
5. CU855895.3 CU855895.3 21 1.853 0.887 - - - - - - - 0.966
6. si:dkey-153k10.6 10 1.841 0.841 - - - 1.000 - - - - si:dkey-153k10.6, transcript variant X1
7. slain1b ENSDARG00000104974 61 1.823 0.898 - 0.925 - - - - - - SLAIN motif family, member 1b [Source:ZFIN;Acc:ZDB-GENE-080516-6]
8. CABZ01081674.1 CABZ01081674.1 15 1.808 - 0.808 - - 1.000 - - - -
9. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1.808 1.000 0.808 - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
10. atp8b3 ENSDARG00000042285 31 1.808 1.000 0.808 - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
11. si:dkey-15h19.3 si:dkey-15h19.3 5 1.808 1.000 0.808 - - - - - - -
12. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.795 - - 0.795 - 1.000 - - - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
13. si:ch211-244b2.3 ENSDARG00000069244 19 1.781 - 0.781 - - - - - - 1.000 si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
14. CABZ01002626.1 CABZ01002626.1 29 1.771 1.000 - 0.771 - - - - - -
15. soat2 ENSDARG00000059824 62 1.744 1.000 - 0.744 - - - - - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
16. ZC3H12A ENSDARG00000005271 5 1.736 - - 0.736 - 1.000 - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
17. abcc8 ENSDARG00000051879, ENSDARG00000114458 18 1.728 - - - - 1.000 - - - 0.728 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050517-22]
18. zgc:171501 ENSDARG00000075375 11 1.651 - 0.808 - - 0.843 - - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
19. oxgr1a.1 ENSDARG00000033684 24 1.649 0.841 0.808 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
20. piwil1 ENSDARG00000041699 21 1.622 0.907 - - - 0.715 - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
21. ASPG_1 ASPG_1 2 1 - - - - 1.000 - - - -
22. pygo1 ENSDARG00000098687 4 1 1.000 - - - - - - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
23. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - - - - - - - 1.000
24. CU681842.3 CU681842.3 2 1 - - - - 1.000 - - - -
25. extl2 ENSDARG00000063191 118 1 - 1.000 - - - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
26. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 1 1.000 - - - - - - - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
27. tbc1d25 ENSDARG00000075333 126 1 1.000 - - - - - - - - TBC1 domain family, member 25 [Source:ZFIN;Acc:ZDB-GENE-041111-25]
28. zgc:174654 zgc:174654 54 1 - 1.000 - - - - - - -
29. im:7160594 ENSDARG00000070957 1 1 - - - - 1.000 - - - - im:7160594 [Source:ZFIN;Acc:ZDB-GENE-080917-43]
30. syt5b ENSDARG00000011640 70 1 - 1.000 - - - - - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
31. CR388416.2 CR388416.2 3 1 1.000 - - - - - - - -
32. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - 1.000 - - - -
33. GIGYF1_2 GIGYF1_2 22 1 1.000 - - - - - - - -
34. SLC4A10 SLC4A10 1 1 - - - - 1.000 - - - -
35. KCNJ12 KCNJ12 17 1 1.000 - - - - - - - -
36. atg16l2 ENSDARG00000043238, ENSDARG00000109384 10 1 1.000 - - - - - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
37. NCKAP1L ENSDARG00000075748 129 1 1.000 - - - - - - - - NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]
38. zgc:123068 ENSDARG00000017489 15 1 - - - - 1.000 - - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
39. alkbh7 ENSDARG00000037906 9 1 - - - - 1.000 - - - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
40. GSG1 GSG1 10 1 - 1.000 - - - - - - -
41. si:ch211-283l16.1 ENSDARG00000112586 131 1 - 1.000 - - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
42. fnbp1 fnbp1 5 1 - - - - 1.000 - - - -
43. si:ch211-267e7.11 si:ch211-267e7.11 0 1 - - - - 1.000 - - - -
44. BX119916.1 BX119916.1 19 1 1.000 - - - - - - - -
45. olfcw1 ENSDARG00000100604, ENSDARG00000109588 0 1 - - - - 1.000 - - - - olfactory receptor C family, w1 [Source:ZFIN;Acc:ZDB-GENE-050522-281]
46. nfixa ENSDARG00000043226 14 1 - - - - 1.000 - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
47. CR356223.3 CR356223.3 0 1 - - - - 1.000 - - - -
48. sytl4 ENSDARG00000102433 19 1 1.000 - - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
49. si:dkey-79c1.1 ENSDARG00000093179 11 1 - 1.000 - - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
50. pcdh1g2 ENSDARG00000101232 5 1 - - - - - - - - 1.000 protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
51. WASF3 WASF3 1 1 - - - - 1.000 - - - -
52. CABZ01075947.1 CABZ01075947.1 2 1 - - - - - - - - 1.000
53. si:ch211-207e19.13 si:ch211-207e19.13 1 1 - - - - 1.000 - - - -
54. CU457819.2 ENSDARG00000105374 8 1 - - - - 1.000 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
55. itpr2 ENSDARG00000011909 3 1 - - - - 1.000 - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
56. zgc:153311 ENSDARG00000015964 85 1 - - - - 1.000 - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
57. CABZ01057951.1 CABZ01057951.1 10 1 1.000 - - - - - - - -
58. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - - - 1.000 - - - -
59. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 1 - - - - 1.000 - - - - finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
60. pcdh2ab6 ENSDARG00000091043 1 1 - - - - 1.000 - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
61. si:dkey-45h7.1 ENSDARG00000093618 1 1 - - - - 1.000 - - - - si:dkey-45h7.1 [Source:ZFIN;Acc:ZDB-GENE-050420-369]
62. kcnq2a ENSDARG00000075307 7 1 1.000 - - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
63. FKBP15_2 FKBP15_2 40 1 1.000 - - - - - - - -
64. zgc:103510 ENSDARG00000027699 13 1 1.000 - - - - - - - - zgc:103510 [Source:ZFIN;Acc:ZDB-GENE-041212-27]
65. fmn1 ENSDARG00000011975 5 1 - - - - 1.000 - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
66. ZNRF4 ZNRF4 16 1 - - - - - - - - 1.000
67. si:dkey-19a16.13 ENSDARG00000095454 0 1 - - - - 1.000 - - - - si:dkey-19a16.13 [Source:ZFIN;Acc:ZDB-GENE-110411-2]
68. BX548021.2 BX548021.2 4 1 - - - - 1.000 - - - -
69. zgc:172075 ENSDARG00000076146 93 1 1.000 - - - - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
70. ZNF835 ZNF835 6 1 - - - - 1.000 - - - -
71. lgi1b ENSDARG00000058421 12 1 - - - - 1.000 - - - - leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
72. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - - - 1.000 si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
73. dennd2db ENSDARG00000030250 24 1 1.000 - - - - - - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
74. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - - - 1.000 - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
75. zdhhc24 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 6 1 - - - - 1.000 - - - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
76. frzb ENSDARG00000018383 93 1 1.000 - - - - - - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
77. erap2 ENSDARG00000098618 16 1 1.000 - - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
78. paqr8 ENSDARG00000088828 4 1 - - - - - - - - 1.000 progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
79. ABCC6 ABCC6 5 1 1.000 - - - - - - - -
80. parp12a ENSDARG00000042496 82 1 1.000 - - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
81. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - - 1.000 - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
82. crygm2e ENSDARG00000044875 1 1 - - - - 1.000 - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
83. CR354549.1 ENSDARG00000117215 3 1 1.000 - - - - - - - -
84. pde6a ENSDARG00000000380 40 1 1.000 - - - - - - - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
85. si:dkey-197d18.1 si:dkey-197d18.1 4 1 - - - - 1.000 - - - -
86. LRFN5_1 LRFN5_1 96 1 - 1.000 - - - - - - -
87. illr4 ENSDARG00000008075 164 1 1.000 - - - - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
88. ctc1 ENSDARG00000070119 8 1 1.000 - - - - - - - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
89. si:ch211-223a10.3 si:ch211-223a10.3 3 1 - - - - 1.000 - - - -
90. CR762480.2 ENSDARG00000102728 1 1 - - - - 1.000 - - - -
91. ca15b ENSDARG00000040510 5 1 1.000 - - - - - - - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
92. HIST2H4A HIST2H4A 33 1 1.000 - - - - - - - -
93. tsg101 tsg101 1 1 - - - - 1.000 - - - -
94. eif2b5 ENSDARG00000074995 8 1 1.000 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
95. si:ch211-121a2.2 ENSDARG00000039682 1240 1 - - - - 1.000 - - - - si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]
96. zgc:173702_1 ENSDARG00000110229 24 1 1.000 - - - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
97. chtopb ENSDARG00000070430 29 1 1.000 - - - - - - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
98. CABZ01059392.1 ENSDARG00000063108 3 1 1.000 - - - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
99. CIT_1 CIT_1 6 1 - - - - 1.000 - - - -
100. samsn1b ENSDARG00000078647 8 1 - - - - 1.000 - - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]

There are 717 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA