Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP_4

Gene Name Gene ID Reads Annotation
Metazoa_SRP_4 Metazoa_SRP_4 0










Genes with expression patterns similar to Metazoa_SRP_4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zpcx ENSDARG00000059252, ENSDARG00000111002 33 1 - - - 1.000 - - - - - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
2. CABZ01080134.1 CABZ01080134.1 2 1 - - - 1.000 - - - - -
3. scpp1 ENSDARG00000090416 1 1 - - - 1.000 - - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]
4. CU302326.1 CU302326.1 1 1 - - - 1.000 - - - - -
5. EXD1 ENSDARG00000098669 27 1 - - - 1.000 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
6. TRPC7 TRPC7 1 1 - - - 1.000 - - - - -
7. htra3a ENSDARG00000052895 28 1 - - - 1.000 - - - - - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
8. IMPG2_1 IMPG2_1 2 1 - - - 1.000 - - - - -
9. PLA2G4C_1 PLA2G4C_1 2 1 - - - 1.000 - - - - -
10. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - 1.000 - - - - -
11. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 - - - 1.000 - - - - -
12. CR450840.2 CR450840.2 1 1 - - - 1.000 - - - - -
13. adcy9 ENSDARG00000100869 1 1 - - - 1.000 - - - - - adenylate cyclase 9 [Source:ZFIN;Acc:ZDB-GENE-050208-455]
14. BX470196.1 BX470196.1 9 1 - - - 1.000 - - - - -
15. CABZ01016604.1 CABZ01016604.1 12 1 - - - 1.000 - - - - -
16. STX1A ENSDARG00000058994 0 1 - - - 1.000 - - - - - syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]
17. U1_1 U1_1 0 1 - - - 1.000 - - - - -
18. CU856520.1 ENSDARG00000098941 2 1 - - - 1.000 - - - - -
19. si:ch73-21k16.5 ENSDARG00000078770 7 1 - - - 1.000 - - - - - si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]
20. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - 1.000 - - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
21. si:dkeyp-33c10.5 11 1 - - - 1.000 - - - - - si:dkeyp-33c10.5, transcript variant X2
22. si:ch211-131e11.15 si:ch211-131e11.15 0 1 - - - 1.000 - - - - -
23. si:dkey-203c4.2 si:dkey-203c4.2 4 1 - - - 1.000 - - - - -
24. bend5 ENSDARG00000075624 10 1 - - - 1.000 - - - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
25. vtg3 ENSDARG00000016448 8 1 - - - 1.000 - - - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
26. si:dkeyp-52c3.1 3 1 - - - 1.000 - - - - - si:dkeyp-52c3.1, transcript variant X1
27. mcm5_1 ENSDARG00000019507 10 1 - - - 1.000 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
28. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - 1.000 - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
29. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1 - - - 1.000 - - - - -
30. SGSM1_1 SGSM1_1 40 1 - - - 1.000 - - - - -
31. FBXO15 ENSDARG00000016897 4 1 - - - 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
32. SSTR2 SSTR2 12 1 - - - 1.000 - - - - -
33. hcrt ENSDARG00000070932 4 1 - - - 1.000 - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
34. tlr5a ENSDARG00000044415 3 1 - - - 1.000 - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
35. TRAF2 TRAF2 13 1 - - - 1.000 - - - - -
36. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
37. U1_43 U1_43 0 1 - - - 1.000 - - - - -
38. BX465203.1 ENSDARG00000113985 8 1 - - - 1.000 - - - - -
39. CABZ01060030.1 ENSDARG00000106579 55 1 - - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
40. guca1c ENSDARG00000030758 9 1 - - - 1.000 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
41. zgc:114037_5 6 1 - - - 1.000 - - - - - zgc:114037
42. BX321875.3 ENSDARG00000112569 24 1 - - - 1.000 - - - - -
43. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
44. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
45. gpr155a ENSDARG00000090804 27 1 - - - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
46. si:ch211-198o19.2 si:ch211-198o19.2 0 1 - - - 1.000 - - - - -
47. ONECUT2 ENSDARG00000090387 8 1 - - - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
48. si:ch211-15p9.2 ENSDARG00000062241 1 1 - - - 1.000 - - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
49. BX005421.6 BX005421.6 4 1 - - - 1.000 - - - - -
50. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
51. FMNL1 FMNL1 7 1 - - - 1.000 - - - - -
52. GM2A ENSDARG00000088439 55 1 - - - 1.000 - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
53. top3b ENSDARG00000027586 8 1 - - - 1.000 - - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
54. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - - 1.000 - - - - -
55. bard1 ENSDARG00000076733 40 1 - - - 1.000 - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
56. mtp 1 1 - - - 1.000 - - - - - microsomal triglyceride transfer protein
57. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
58. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - 1.000 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
59. dcst2 ENSDARG00000088693 1 1 - - - 1.000 - - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
60. BX005442.2 ENSDARG00000111949 0 1 - - - 1.000 - - - - -
61. MYL2 MYL2 7 1 - - - 1.000 - - - - -
62. U1_24 U1_24 0 1 - - - 1.000 - - - - -
63. U1_27 U1_27 0 1 - - - 1.000 - - - - -
64. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1 - - - 1.000 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
65. Metazoa_SRP_4 Metazoa_SRP_4 0 1 - - - 1.000 - - - - -
66. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
67. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
68. zgc:158654 19 1 - - - 1.000 - - - - - zgc:158654, transcript variant X1
69. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
70. ighv14-1 ENSDARG00000096418 17 1 - - - 1.000 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
71. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
72. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
73. CABZ01072853.1 CABZ01072853.1 35 0.947 - - - 0.947 - - - - -
74. RNase_MRP RNase_MRP 118 0.924 - - - 0.924 - - - - -
75. creb5b ENSDARG00000070536 9 0.924 - - - 0.924 - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
76. si:dkey-114b16.5 si:dkey-114b16.5 5 0.924 - - - 0.924 - - - - -
77. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 0.924 - - - 0.924 - - - - -
78. cthl ENSDARG00000032206 2 0.922 - - - 0.922 - - - - - cystathionase (cystathionine gamma-lyase), like [Source:ZFIN;Acc:ZDB-GENE-040905-3]
79. vmhcl 119 0.916 - - - 0.916 - - - - - ventricular myosin heavy chain-like
80. pdcd7 ENSDARG00000038976 420 0.908 - - - 0.908 - - - - - programmed cell death 7 [Source:ZFIN;Acc:ZDB-GENE-040728-3]
81. lhx8a ENSDARG00000002330 25 0.908 - - - 0.908 - - - - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
82. GALNT8_1 GALNT8_1 10 0.907 - - - 0.907 - - - - -
83. tcf3a ENSDARG00000005915 12 0.907 - - - 0.907 - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
84. pclob ENSDARG00000098880 60 0.907 - - - 0.907 - - - - - piccolo presynaptic cytomatrix protein b [Source:ZFIN;Acc:ZDB-GENE-030131-8100]
85. si:ch73-119o17.1 si:ch73-119o17.1 6 0.907 - - - 0.907 - - - - -
86. BX119963.1 ENSDARG00000096135 28 0.904 - - - 0.904 - - - - -
87. HTRA2_10 HTRA2_10 2 0.879 - - - 0.879 - - - - -
88. si:dkey-256e21.1 si:dkey-256e21.1 11 0.879 - - - 0.879 - - - - -
89. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.879 - - - 0.879 - - - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
90. six7 ENSDARG00000070107 140 0.879 - - - 0.879 - - - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
91. CPEB4_1 CPEB4_1 1 0.879 - - - 0.879 - - - - -
92. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 0.873 - - - 0.873 - - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
93. slc10a2 ENSDARG00000014916, ENSDARG00000112112 20 0.866 - - - 0.866 - - - - - solute carrier family 10 (sodium/bile acid cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1328]
94. dbh ENSDARG00000069446, ENSDARG00000114942 60 0.856 - - - 0.856 - - - - - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
95. si:ch211-196c10.8 si:ch211-196c10.8 19 0.814 - - - 0.814 - - - - -
96. nr5a1b ENSDARG00000023362 54 0.8 - - - 0.800 - - - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
97. CCDC89 CCDC89 40 0.799 - - - 0.799 - - - - -
98. si:ch211-284a16.4 si:ch211-284a16.4 1 0.799 - - - 0.799 - - - - -
99. si:ch211-15j21.2 si:ch211-15j21.2 13 0.799 - - - 0.799 - - - - -
100. si:dkey-176f19.5 si:dkey-176f19.5 10 0.789 - - - 0.789 - - - - -

There are 20 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA