Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP_27

Gene Name Gene ID Reads Annotation
Metazoa_SRP_27 Metazoa_SRP_27 2










Genes with expression patterns similar to Metazoa_SRP_27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Metazoa_SRP_27 Metazoa_SRP_27 2 3 1.000 - 1.000 - - - - - 1.000
2. rag2 ENSDARG00000052121 15 1.911 1.000 - - - - - - - 0.911 recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
3. si:dkeyp-10a3.2 18 1.663 0.932 - - - - - - - 0.731 si:dkeyp-10a3.2
4. CU929521.1 CU929521.1 1 1 - - 1.000 - - - - - -
5. BX324198.1 BX324198.1 12 1 - - 1.000 - - - - - -
6. ak5 ENSDARG00000012555 12 1 - - 1.000 - - - - - - adenylate kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8256]
7. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
8. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
9. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
10. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
11. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
12. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
13. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
14. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
15. si:ch211-190p8.2 ENSDARG00000088276 1 1 - - - - - - - - 1.000 si:ch211-190p8.2 [Source:ZFIN;Acc:ZDB-GENE-070424-145]
16. s1pr5b ENSDARG00000052192 52 1 - - 1.000 - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
17. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
18. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
19. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
20. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
21. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
22. 5_8S_rRNA_5 5_8S_rRNA_5 1 1 - - 1.000 - - - - - -
23. U1_29 U1_29 0 1 1.000 - - - - - - - -
24. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
25. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
26. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
27. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
28. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
29. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
30. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
31. gabrr2a ENSDARG00000052982 21 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
32. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
33. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
34. irf1a ENSDARG00000043492 5 1 - - - - - - - - 1.000 interferon regulatory factor 1a [Source:ZFIN;Acc:ZDB-GENE-060421-4031]
35. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
36. FP245525.1 FP245525.1 3 1 - - 1.000 - - - - - -
37. rom1b ENSDARG00000026926 4 1 - - 1.000 - - - - - - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
38. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
39. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
40. BIN1 BIN1 11 1 1.000 - - - - - - - -
41. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
42. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
43. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
44. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 1 - - 1.000 - - - - - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
45. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
46. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
47. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
48. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
49. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
50. ros1 ENSDARG00000087197 9 1 - - 1.000 - - - - - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
51. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
52. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1 - - 1.000 - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
53. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
54. papd4_1 6 1 - - - - - - - - 1.000 PAP associated domain containing 4, transcript variant X1
55. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
56. CU570791.1 ENSDARG00000098597 4 1 - - - - - - - - 1.000 NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
57. or111-2 ENSDARG00000025658 2 1 1.000 - - - - - - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
58. znf652 ENSDARG00000062302 17 1 1.000 - - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
59. paqr8 ENSDARG00000088828 4 1 - - - - - - - - 1.000 progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
60. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
61. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - 1.000 - - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
62. ACTN4_2 ACTN4_2 1 1 1.000 - - - - - - - -
63. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
64. ZNRF4 ZNRF4 16 1 - - - - - - - - 1.000
65. MIER3 MIER3 114 1 1.000 - - - - - - - -
66. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
67. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
68. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
69. si:dkey-239h2.4 si:dkey-239h2.4 0 1 1.000 - - - - - - - -
70. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
71. zfyve19 ENSDARG00000003642 12 1 1.000 - - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
72. FBF1 FBF1 13 1 1.000 - - - - - - - -
73. CABZ01071058.1 CABZ01071058.1 4 1 - - 1.000 - - - - - -
74. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 1.000 - - - - - - - -
75. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
76. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
77. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
78. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
79. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
80. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
81. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
82. fgf10b ENSDARG00000100475 17 1 - - 1.000 - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
83. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
84. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
85. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
86. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
87. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
88. zgc:172244 zgc:172244 4 1 - - 1.000 - - - - - -
89. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
90. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
91. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
92. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
93. si:ch211-244b2.3 ENSDARG00000069244 19 1 - - - - - - - - 1.000 si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
94. zgc:101553 zgc:101553 1 1 - - 1.000 - - - - - -
95. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
96. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
97. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
98. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
99. pcdh1g2 ENSDARG00000101232 5 1 - - - - - - - - 1.000 protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
100. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]

There are 371 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA