Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP_27

Gene Name Gene ID Reads Annotation
Metazoa_SRP_27 Metazoa_SRP_27 2










Genes with expression patterns similar to Metazoa_SRP_27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Metazoa_SRP_27 Metazoa_SRP_27 2 3 1.000 - 1.000 - - - - - 1.000
2. rag2 ENSDARG00000052121 15 1.911 1.000 - - - - - - - 0.911 recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
3. si:dkeyp-10a3.2 18 1.663 0.932 - - - - - - - 0.731 si:dkeyp-10a3.2
4. gabrr2a ENSDARG00000052982 21 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
5. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
6. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
7. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
8. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
9. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
10. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
11. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
12. HCN2 HCN2 0 1 - - 1.000 - - - - - -
13. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
14. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - 1.000 - - - - - -
15. rx3 ENSDARG00000052893 43 1 1.000 - - - - - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
16. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
17. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
18. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
19. PROC PROC 11 1 - - 1.000 - - - - - -
20. wisp1a ENSDARG00000054331 26 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
21. psmb9a ENSDARG00000000656 16 1 1.000 - - - - - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
22. dnajb4 ENSDARG00000038978 56 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-192]
23. U3_4 U3_4 2 1 - - - - - - - - 1.000
24. slc44a5a ENSDARG00000017398 5 1 1.000 - - - - - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
25. si:dkey-20i20.3 ENSDARG00000092246 4 1 - - 1.000 - - - - - - si:dkey-20i20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-623]
26. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
27. BX000477.1 BX000477.1 1 1 - - 1.000 - - - - - -
28. si:ch211-190p8.2 ENSDARG00000088276 1 1 - - - - - - - - 1.000 si:ch211-190p8.2 [Source:ZFIN;Acc:ZDB-GENE-070424-145]
29. si:dkey-239h2.4 si:dkey-239h2.4 0 1 1.000 - - - - - - - -
30. ascc2 ENSDARG00000013058 228 1 1.000 - - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
31. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
32. mir124-1 10 1 1.000 - - - - - - - - microRNA 124-1
33. si:ch73-287n15.1 si:ch73-287n15.1 20 1 1.000 - - - - - - - -
34. si:dkey-199c16.2 si:dkey-199c16.2 0 1 - - 1.000 - - - - - -
35. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
36. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
37. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
38. CCDC74B CCDC74B 8 1 1.000 - - - - - - - -
39. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
40. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
41. si:ch211-238e22.2 ENSDARG00000112450 23 1 1.000 - - - - - - - - si:ch211-238e22.2 [Source:ZFIN;Acc:ZDB-GENE-041210-346]
42. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
43. si:dkey-188p4.1 si:dkey-188p4.1 1 1 1.000 - - - - - - - -
44. znf652 ENSDARG00000062302 17 1 1.000 - - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
45. kcnk10b ENSDARG00000045956 43 1 1.000 - - - - - - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
46. DUSP23 DUSP23 121 1 1.000 - - - - - - - -
47. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
48. mir138 19 1 1.000 - - - - - - - - microRNA 138
49. gfra2b ENSDARG00000044015 5 1 1.000 - - - - - - - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
50. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
51. si:dkey-35m8.1 ENSDARG00000094587 0 1 1.000 - - - - - - - - si:dkey-35m8.1 [Source:ZFIN;Acc:ZDB-GENE-060526-296]
52. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
53. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
54. syt8 syt8 82 1 1.000 - - - - - - - -
55. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
56. si:dkey-220a11.6 si:dkey-220a11.6 0 1 1.000 - - - - - - - -
57. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
58. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
59. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
60. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 1.000 - - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
61. si:dkey-47k20.6 si:dkey-47k20.6 2 1 1.000 - - - - - - - -
62. CU570791.1 ENSDARG00000098597 4 1 - - - - - - - - 1.000 NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
63. zfyve19 ENSDARG00000003642 12 1 1.000 - - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
64. CABZ01086354.1_1 CABZ01086354.1_1 89 1 1.000 - - - - - - - -
65. si:ch211-202m22.1 ENSDARG00000094491 24 1 1.000 - - - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
66. GPR32_1 GPR32_1 9 1 - - 1.000 - - - - - -
67. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 1.000 - - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
68. si:ch211-186e20.7 ENSDARG00000077960 1 1 - - - - - - - - 1.000 si:ch211-186e20.7 [Source:ZFIN;Acc:ZDB-GENE-110407-6]
69. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
70. zgc:113209 ENSDARG00000100294 176 1 1.000 - - - - - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
71. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
72. WDR7 2 1 - - - - - - - - 1.000 WD repeat domain 7
73. CR936371.2 ENSDARG00000117302 2 1 - - 1.000 - - - - - -
74. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
75. si:ch211-113a14.15_2 37 1 1.000 - - - - - - - - si:ch211-113a14.15
76. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
77. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
78. si:dkey-89j23.3 si:dkey-89j23.3 9 1 1.000 - - - - - - - -
79. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
80. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
81. apof ENSDARG00000090980 145 1 1.000 - - - - - - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
82. BX005294.3 BX005294.3 0 1 - - 1.000 - - - - - -
83. zgc:173711 zgc:173711 2 1 - - 1.000 - - - - - -
84. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
85. PLCB1 2 1 - - 1.000 - - - - - - phospholipase C beta 1
86. col8a1b ENSDARG00000003533 18 1 - - - - - - - - 1.000 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
87. kdr ENSDARG00000017321 31 1 - - 1.000 - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
88. U1_32 U1_32 2 1 1.000 - - - - - - - -
89. BEND2_1 BEND2_1 45 1 1.000 - - - - - - - -
90. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
91. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
92. BIN1 BIN1 11 1 1.000 - - - - - - - -
93. adamts13 ENSDARG00000076270 8 1 - - - - - - - - 1.000 ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
94. si:ch211-26b3.4 ENSDARG00000075491 50 1 1.000 - - - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
95. CR942805.3 CR942805.3 7 1 1.000 - - - - - - - -
96. CR356223.4 CR356223.4 42 1 1.000 - - - - - - - -
97. SH3RF3 ENSDARG00000102334 1 1 - - 1.000 - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
98. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
99. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
100. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - - - 1.000 si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]

There are 371 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA