Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP_24

Gene Name Gene ID Reads Annotation
Metazoa_SRP_24 Metazoa_SRP_24 4










Genes with expression patterns similar to Metazoa_SRP_24

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Metazoa_SRP_24 Metazoa_SRP_24 4 6 1.000 1.000 1.000 1.000 - - - 1.000 1.000
2. ANKRD34A 22 2.403 0.746 0.873 - 0.784 - - - - - ankyrin repeat domain 34A, transcript variant X2
3. Metazoa_SRP_23 Metazoa_SRP_23 3 2 1.000 - 1.000 - - - - - -
4. mrc1b ENSDARG00000038822 73 2 1.000 1.000 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
5. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 2 - 1.000 - - - - - - 1.000 zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
6. or115-14 ENSDARG00000094235 17 2 1.000 1.000 - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
7. ETS1 ENSDARG00000024431 6 2 1.000 - - - - - - - 1.000 v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
8. calhm1 ENSDARG00000077021 2 2 1.000 - - - - - - 1.000 - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
9. AL807829.1 AL807829.1 2 1.983 1.000 - - 0.983 - - - - -
10. PEG3_21 PEG3_21 2 1.979 1.000 - 0.979 - - - - - -
11. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1.937 - 1.000 - 0.937 - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
12. si:ch73-155e10.1 si:ch73-155e10.1 13 1.922 - 0.922 - - - - - - 1.000
13. CR376787.3 CR376787.3 11 1.921 - - - 0.977 - - - - 0.944
14. ano6 ENSDARG00000061544 21 1.919 1.000 - - 0.919 - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
15. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1.918 1.000 - 0.918 - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
16. cyp2aa2 ENSDARG00000104811 77 1.917 - 1.000 0.917 - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
17. vmhcl 119 1.88 1.000 - - - - - - - 0.880 ventricular myosin heavy chain-like
18. ACP2 ENSDARG00000007244 6 1.878 - 1.000 - 0.878 - - - - - acid phosphatase 2, lysosomal [Source:ZFIN;Acc:ZDB-GENE-050306-40]
19. BX323064.1 ENSDARG00000099914 11 1.862 1.000 0.862 - - - - - - -
20. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.856 - 0.856 - - - - - 1.000 - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
21. pla2g15 ENSDARG00000103271 4 1.851 1.000 0.851 - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
22. CABZ01028403.3 CABZ01028403.3 4 1.842 - 0.856 - 0.986 - - - - -
23. clcf1 ENSDARG00000076140 5 1.824 - - - 1.000 - - - - 0.824 cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
24. il15l ENSDARG00000007743, ENSDARG00000109605 17 1.821 - 1.000 - 0.821 - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
25. SLC39A8 ENSDARG00000056757 52 1.808 1.000 0.808 - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
26. TXNRD2 TXNRD2 14 1.778 - 1.000 - - - - - - 0.778
27. si:ch211-176g6.2 ENSDARG00000079791 4 1.761 - - 0.909 - - - - - 0.852 si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
28. cmlc1 ENSDARG00000032976 455 1.754 1.000 - - - - - - - 0.754 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
29. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.729 - 1.000 - - - - - 0.729 -
30. dlgap3 ENSDARG00000055459 85 1.724 0.746 0.978 - - - - - - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
31. CABZ01079304.1 CABZ01079304.1 7 1.718 1.000 - - - - - - - 0.718
32. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.705 1.000 - - - - - - 0.705 - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
33. oaz2b ENSDARG00000059815 38 1.683 0.746 - 0.937 - - - - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
34. slc6a1a ENSDARG00000045944 260 1.673 - 0.951 - - - - - 0.722 - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
35. sall1b ENSDARG00000075891 32 1.638 - 0.862 - - - - - - 0.776 spalt-like transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-020228-3]
36. nt5e ENSDARG00000071017 18 1.611 0.859 0.752 - - - - - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
37. plcd3b ENSDARG00000079572 64 1.479 - 0.744 0.735 - - - - - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
38. SNORA77 SNORA77 2 1 - 1.000 - - - - - - -
39. dnaaf3 ENSDARG00000092662 20 1 - - 1.000 - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
40. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - - - - 1.000
41. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
42. si:ch211-234c11.1 si:ch211-234c11.1 3 1 - - - - - - - 1.000 -
43. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 1 - - - - - - - - 1.000
44. slc26a4 ENSDARG00000069431 2 1 - - - - - - - - 1.000 solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
45. elmod3 ENSDARG00000074742 6 1 - - - - - - - - 1.000 ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
46. si:dkeyp-59a8.3 si:dkeyp-59a8.3 3 1 - 1.000 - - - - - - -
47. AADAT ENSDARG00000011410 4 1 - - - - - - - 1.000 - aminoadipate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-111229-1]
48. si:dkey-25o1.7 ENSDARG00000093570, ENSDARG00000100520, ENSDARG00000111049, ENSDARG00000112319 13 1 - - - 1.000 - - - - - si:dkey-25o1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-375]
49. CR847893.2 CR847893.2 2 1 - - 1.000 - - - - - -
50. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
51. CU075911.1 CU075911.1 2 1 - - - 1.000 - - - - -
52. si:dkey-21n8.3 si:dkey-21n8.3 5 1 1.000 - - - - - - - -
53. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - 1.000 - - - - - - -
54. CU179643.1 ENSDARG00000086489 25 1 - 1.000 - - - - - - -
55. si:dkey-56d12.4 ENSDARG00000070845 2 1 - 1.000 - - - - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
56. BX088691.1 BX088691.1 9 1 - 1.000 - - - - - - -
57. BX088603.2 ENSDARG00000099595 2 1 - - - - - - - 1.000 -
58. zgc:158464 ENSDARG00000100342 18 1 - - - - - - - - 1.000 zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
59. si:ch73-111m19.2 ENSDARG00000003077 43 1 1.000 - - - - - - - - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
60. sycp1 ENSDARG00000003904 8 1 1.000 - - - - - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
61. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1 - 1.000 - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
62. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - 1.000 - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
63. Metazoa_SRP_17 Metazoa_SRP_17 1 1 - - - 1.000 - - - - -
64. PPHLN1 ENSDARG00000045692 4 1 - - 1.000 - - - - - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
65. brpf3 brpf3 15 1 1.000 - - - - - - - -
66. slc10a4 ENSDARG00000009131 51 1 1.000 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
67. FP015791.1 FP015791.1 90 1 1.000 - - - - - - - -
68. gpr155a ENSDARG00000090804 27 1 1.000 - - - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
69. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
70. irf3 ENSDARG00000076251 8 1 - 1.000 - - - - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
71. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - - - - - 1.000 -
72. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
73. C6H21orf58 C6H21orf58 14 1 - 1.000 - - - - - - -
74. LRRC2 LRRC2 23 1 - - 1.000 - - - - - -
75. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
76. pex11b ENSDARG00000069147 1 1 - - - - - - - - 1.000 peroxisomal biogenesis factor 11 beta [Source:ZFIN;Acc:ZDB-GENE-060825-289]
77. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
78. si:ch211-240l19.5 ENSDARG00000039393, ENSDARG00000117050 23 1 - - - 1.000 - - - - - si:ch211-240l19.5 [Source:ZFIN;Acc:ZDB-GENE-041210-327]
79. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
80. RBBP6_2 RBBP6_2 23 1 - - - - - - - - 1.000
81. CABZ01071909.1 ENSDARG00000117524 2 1 - - - - - - - - 1.000
82. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
83. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
84. sdk1b ENSDARG00000062854 16 1 1.000 - - - - - - - - sidekick cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-090311-17]
85. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
86. dlg3 ENSDARG00000076796, ENSDARG00000111101 2 1 - - - - - - - - 1.000 discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
87. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 1 - - - - - - - - 1.000 intelectin 2 [Source:NCBI gene;Acc:100007792]
88. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - - - - - - 1.000
89. HIST1H4J_4 HIST1H4J_4 9 1 1.000 - - - - - - - -
90. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 1 - 1.000 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
91. KHNYN ENSDARG00000092488 10 1 - - - - - - - 1.000 - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
92. si:dkey-240n22.2 si:dkey-240n22.2 2 1 - - - - - - - - 1.000
93. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
94. col28a1 col28a1 5 1 1.000 - - - - - - - -
95. zgc:172014 ENSDARG00000101775 3 1 - - - - - - - - 1.000 zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
96. DNAH3 ENSDARG00000068468 3 1 - 1.000 - - - - - - - dynein axonemal heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-091112-7]
97. ARHGEF38 ENSDARG00000079377 9 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
98. gzmk ENSDARG00000028780 1 1 - - - - - - - - 1.000 granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
99. cldn15b ENSDARG00000101109 4 1 - 1.000 - - - - - - - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
100. si:ch211-211i20.1 si:ch211-211i20.1 29 1 - - - - - - - - 1.000

There are 855 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA