Zebrafish data search
Results for Metazoa_SRP_20
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| Metazoa_SRP_20 | Metazoa_SRP_20 | 2 |
Genes with expression patterns similar to Metazoa_SRP_20
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | Metazoa_SRP_20 | Metazoa_SRP_20 | 2 | 3 | - | - | 1.000 | - | - | 1.000 | - | 1.000 | - | |
| 2. | slc7a1 | ENSDARG00000016439, ENSDARG00000115084 | 32 | 1.724 | - | - | 0.987 | - | - | 0.737 | - | - | - | solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69] |
| 3. | irx4a | ENSDARG00000035648 | 71 | 1.484 | - | - | 0.747 | - | - | 0.737 | - | - | - | iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825] |
| 4. | zgc:112234_7 | ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | zgc:112234 [Source:NCBI gene;Acc:554097] |
| 5. | BX569789.2 | BX569789.2 | 12 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 6. | si:dkey-88e10.2 | si:dkey-88e10.2 | 7 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 7. | PEG3_25 | PEG3_25 | 0 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 8. | si:ch211-147m20.1 | si:ch211-147m20.1 | 6 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 9. | zgc:195175 | ENSDARG00000069311, ENSDARG00000111510 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | zgc:195175 [Source:ZFIN;Acc:ZDB-GENE-081022-191] |
| 10. | si:ch211-274k16.4 | si:ch211-274k16.4 | 6 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 11. | si:dkey-85n7.11 | si:dkey-85n7.11 | 2 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 12. | si:ch211-222m18.4 | ENSDARG00000094425 | 7 | 1 | - | - | - | - | - | - | - | 1.000 | - | si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64] |
| 13. | ankrd34bb | ENSDARG00000061641 | 23 | 1 | - | - | - | - | - | - | - | 1.000 | - | ankyrin repeat domain 34Bb [Source:ZFIN;Acc:ZDB-GENE-060526-101] |
| 14. | CABZ01024686.1 | CABZ01024686.1 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 15. | asic2 | ENSDARG00000006849 | 18 | 1 | - | - | - | - | - | 1.000 | - | - | - | acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4] |
| 16. | si:dkey-222e15.4 | 10 | 1 | - | - | - | - | - | 1.000 | - | - | - | si:dkey-222e15.4, transcript variant X4 | |
| 17. | itpr2 | ENSDARG00000011909 | 3 | 1 | - | - | - | - | - | 1.000 | - | - | - | inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192] |
| 18. | CABZ01081904.1 | CABZ01081904.1 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 19. | ihhb | ENSDARG00000058815 | 31 | 1 | - | - | - | - | - | - | - | 1.000 | - | Indian hedgehog homolog b [Source:ZFIN;Acc:ZDB-GENE-980526-135] |
| 20. | CABZ01035647.1 | CABZ01035647.1 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 21. | 5S_rRNA_16 | 5S_rRNA_16 | 10 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 22. | cd44a | ENSDARG00000087863 | 4 | 1 | - | - | 1.000 | - | - | - | - | - | - | CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1] |
| 23. | vtg1 | ENSDARG00000092233 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | vitellogenin 1 [Source:ZFIN;Acc:ZDB-GENE-001201-1] |
| 24. | si:dkey-115f9.2 | si:dkey-115f9.2 | 18 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 25. | stoml3a | ENSDARG00000079914 | 4 | 1 | - | - | - | - | - | - | - | 1.000 | - | stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18] |
| 26. | PEG3_31 | PEG3_31 | 6 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 27. | manba_1 | ENSDARG00000008238 | 8 | 1 | - | - | - | - | - | - | - | 1.000 | - | mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721] |
| 28. | PEG3_19 | PEG3_19 | 29 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 29. | vav3b | ENSDARG00000073713, ENSDARG00000075962 | 26 | 1 | - | - | 1.000 | - | - | - | - | - | - | vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251] |
| 30. | C20H1orf95 | C20H1orf95 | 12 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 31. | si:dkey-45j10.2 | si:dkey-45j10.2 | 5 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 32. | si:ch211-59g22.1 | si:ch211-59g22.1 | 0 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 33. | cyp2k17 | ENSDARG00000104529 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | cytochrome P450, family 2, subfamily K, polypeptide17 [Source:ZFIN;Acc:ZDB-GENE-070424-41] |
| 34. | si:dkey-14d8.7 | ENSDARG00000045834 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143] |
| 35. | slc25a29 | ENSDARG00000057352 | 9 | 1 | - | - | 1.000 | - | - | - | - | - | - | solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70] |
| 36. | trpc5b | ENSDARG00000060837, ENSDARG00000114021 | 15 | 1 | - | - | 1.000 | - | - | - | - | - | - | transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24] |
| 37. | clcn2 | clcn2 | 13 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 38. | TOX4 | TOX4 | 0 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 39. | btr09 | ENSDARG00000054805, ENSDARG00000115798 | 20 | 1 | - | - | - | - | - | 1.000 | - | - | - | bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46] |
| 40. | ZNF337_19 | ZNF337_19 | 3 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 41. | sh2d3cb | ENSDARG00000104555, ENSDARG00000116530 | 21 | 1 | - | - | 1.000 | - | - | - | - | - | - | SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052] |
| 42. | si:ch73-189n23.1 | ENSDARG00000086247 | 15 | 1 | - | - | 1.000 | - | - | - | - | - | - | si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217] |
| 43. | CMAS | CMAS | 10 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 44. | CABZ01023255.1 | ENSDARG00000099984 | 13 | 1 | - | - | 1.000 | - | - | - | - | - | - | NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218] |
| 45. | si:ch73-176g19.2 | si:ch73-176g19.2 | 2 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 46. | si:ch211-150h8.2 | si:ch211-150h8.2 | 0 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 47. | NMI | 3 | 1 | - | - | - | - | - | - | - | 1.000 | - | N-myc (and STAT) interactor | |
| 48. | ZNF800 | ZNF800 | 72 | 1 | - | - | - | - | - | 1.000 | - | - | - | |
| 49. | crebl2 | ENSDARG00000104049 | 16 | 1 | - | - | 1.000 | - | - | - | - | - | - | cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456] |
| 50. | slc8a2a | ENSDARG00000008912, ENSDARG00000116797 | 12 | 0.994 | - | - | 0.994 | - | - | - | - | - | - | solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155] |
| 51. | CABZ01056821.2 | CABZ01056821.2 | 5 | 0.992 | - | - | 0.992 | - | - | - | - | - | - | |
| 52. | si:dkey-111b14.2 | si:dkey-111b14.2 | 25 | 0.984 | - | - | 0.984 | - | - | - | - | - | - | |
| 53. | CABZ01070631.1 | ENSDARG00000110183 | 6 | 0.982 | - | - | 0.982 | - | - | - | - | - | - | F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850] |
| 54. | BX323793.3 | BX323793.3 | 7 | 0.982 | - | - | 0.982 | - | - | - | - | - | - | |
| 55. | pak1_1 | ENSDARG00000103959 | 28 | 0.975 | - | - | 0.975 | - | - | - | - | - | - | p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29] |
| 56. | hydin | ENSDARG00000056764, ENSDARG00000114934 | 16 | 0.973 | - | - | 0.973 | - | - | - | - | - | - | HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219] |
| 57. | dnah9 | ENSDARG00000103383 | 2 | 0.957 | - | - | 0.957 | - | - | - | - | - | - | dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1] |
| 58. | agxta | ENSDARG00000052099 | 65 | 0.953 | - | - | 0.953 | - | - | - | - | - | - | alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16] |
| 59. | BX469910.2 | ENSDARG00000096127 | 6 | 0.953 | - | - | 0.953 | - | - | - | - | - | - | |
| 60. | ocstamp | ENSDARG00000022139, ENSDARG00000114094 | 12 | 0.952 | - | - | 0.952 | - | - | - | - | - | - | osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65] |
| 61. | ms4a17a.2 | ENSDARG00000105674 | 32 | 0.951 | - | - | - | - | - | 0.951 | - | - | - | membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367] |
| 62. | ube2l3b | ENSDARG00000027141 | 26 | 0.947 | - | - | 0.947 | - | - | - | - | - | - | ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662] |
| 63. | CU633740.1 | CU633740.1 | 8 | 0.946 | - | - | 0.946 | - | - | - | - | - | - | |
| 64. | zgc:173652_1 | 4 | 0.945 | - | - | 0.945 | - | - | - | - | - | - | zgc:173652 | |
| 65. | kcnab1 | kcnab1 | 10 | 0.934 | - | - | 0.934 | - | - | - | - | - | - | |
| 66. | si:dkey-57h18.2 | 33 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | si:dkey-57h18.2, transcript variant X1 | |
| 67. | si:dkey-109j17.5 | ENSDARG00000104891 | 2 | 0.928 | - | - | - | - | - | - | - | 0.928 | - | si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173] |
| 68. | kif26bb | ENSDARG00000024575 | 18 | 0.922 | - | - | - | - | - | 0.922 | - | - | - | kinesin family member 26Bb [Source:ZFIN;Acc:ZDB-GENE-041001-188] |
| 69. | si:dkey-1d7.3 | ENSDARG00000075837 | 18 | 0.921 | - | - | 0.921 | - | - | - | - | - | - | si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46] |
| 70. | sumo2a | ENSDARG00000104390 | 4 | 0.918 | - | - | 0.918 | - | - | - | - | - | - | small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155] |
| 71. | zgc:113220 | ENSDARG00000014775 | 235 | 0.914 | - | - | - | - | - | 0.914 | - | - | - | zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64] |
| 72. | si:dkey-220a11.9 | si:dkey-220a11.9 | 10 | 0.914 | - | - | 0.914 | - | - | - | - | - | - | |
| 73. | mapk9 | ENSDARG00000077364 | 38 | 0.91 | - | - | 0.910 | - | - | - | - | - | - | mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28] |
| 74. | zdhhc12a | ENSDARG00000076632 | 13 | 0.908 | - | - | 0.908 | - | - | - | - | - | - | zinc finger, DHHC-type containing 12a [Source:ZFIN;Acc:ZDB-GENE-081104-40] |
| 75. | kcnh2 | kcnh2 | 76 | 0.906 | - | - | 0.906 | - | - | - | - | - | - | |
| 76. | wisp1a | ENSDARG00000054331 | 26 | 0.904 | - | - | 0.904 | - | - | - | - | - | - | WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178] |
| 77. | pbx3b | ENSDARG00000013615, ENSDARG00000110194 | 11 | 0.904 | - | - | 0.904 | - | - | - | - | - | - | pre-B-cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-000405-3] |
| 78. | si:ch211-207c7.6 | si:ch211-207c7.6 | 23 | 0.902 | - | - | 0.902 | - | - | - | - | - | - | |
| 79. | si:dkey-47k16.4_1 | ENSDARG00000113005 | 5 | 0.895 | - | - | 0.895 | - | - | - | - | - | - | si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131] |
| 80. | wu:fb63a08 | 38 | 0.893 | - | - | - | - | - | - | - | 0.893 | - | wu:fb63a08 | |
| 81. | ankef1b | ENSDARG00000060211 | 12 | 0.886 | - | - | 0.886 | - | - | - | - | - | - | ankyrin repeat and EF-hand domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060810-68] |
| 82. | si:ch211-209n20.1 | ENSDARG00000099382 | 2 | 0.881 | - | - | 0.881 | - | - | - | - | - | - | si:ch211-209n20.1 [Source:ZFIN;Acc:ZDB-GENE-070705-98] |
| 83. | NFAT5 | NFAT5 | 62 | 0.878 | - | - | 0.878 | - | - | - | - | - | - | |
| 84. | CU459160.1 | CU459160.1 | 104 | 0.876 | - | - | 0.876 | - | - | - | - | - | - | |
| 85. | si:dkey-30f3.2 | ENSDARG00000098087 | 6 | 0.875 | - | - | - | - | - | - | - | 0.875 | - | si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70] |
| 86. | CABZ01074181.1 | CABZ01074181.1 | 396 | 0.873 | - | - | - | - | - | 0.873 | - | - | - | |
| 87. | CT030712.1 | ENSDARG00000044355 | 83 | 0.868 | - | - | - | - | - | - | - | 0.868 | - | uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830] |
| 88. | BICD1 | BICD1 | 9 | 0.866 | - | - | 0.866 | - | - | - | - | - | - | |
| 89. | foxp3a | ENSDARG00000055750 | 15 | 0.862 | - | - | 0.862 | - | - | - | - | - | - | forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2] |
| 90. | CABZ01055343.2_1 | CABZ01055343.2_1 | 6 | 0.861 | - | - | 0.861 | - | - | - | - | - | - | |
| 91. | plek | ENSDARG00000104325 | 21 | 0.86 | - | - | 0.860 | - | - | - | - | - | - | pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506] |
| 92. | si:ch211-139n6.3 | ENSDARG00000093230 | 147 | 0.855 | - | - | 0.855 | - | - | - | - | - | - | si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114] |
| 93. | BX323793.4 | BX323793.4 | 8 | 0.855 | - | - | 0.855 | - | - | - | - | - | - | |
| 94. | HYAL1 | ENSDARG00000059916 | 134 | 0.85 | - | - | - | - | - | 0.850 | - | - | - | hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42] |
| 95. | si:ch211-283g2.2 | ENSDARG00000108340, ENSDARG00000108953 | 59 | 0.847 | - | - | - | - | - | 0.847 | - | - | - | si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151] |
| 96. | asap3 | ENSDARG00000021896 | 19 | 0.846 | - | - | 0.846 | - | - | - | - | - | - | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39] |
| 97. | CT573256.1 | ENSDARG00000091657 | 18 | 0.84 | - | - | 0.840 | - | - | - | - | - | - | serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952] |
| 98. | VPS37B | ENSDARG00000039319, ENSDARG00000109293 | 150 | 0.839 | - | - | - | - | - | 0.839 | - | - | - | vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254] |
| 99. | LRRC41 | LRRC41 | 11 | 0.837 | - | - | - | - | - | 0.837 | - | - | - | |
| 100. | opn1mw4 | ENSDARG00000000638 | 2 | 0.837 | - | - | - | - | - | 0.837 | - | - | - | opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43] |
There are 177 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA