Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP_20

Gene Name Gene ID Reads Annotation
Metazoa_SRP_20 Metazoa_SRP_20 2










Genes with expression patterns similar to Metazoa_SRP_20

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Metazoa_SRP_20 Metazoa_SRP_20 2 3 - - 1.000 - - 1.000 - 1.000 -
2. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.724 - - 0.987 - - 0.737 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
3. irx4a ENSDARG00000035648 71 1.484 - - 0.747 - - 0.737 - - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
4. asic2 ENSDARG00000006849 18 1 - - - - - 1.000 - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
5. si:dkey-222e15.4 10 1 - - - - - 1.000 - - - si:dkey-222e15.4, transcript variant X4
6. itpr2 ENSDARG00000011909 3 1 - - - - - 1.000 - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
7. CABZ01081904.1 CABZ01081904.1 1 1 - - 1.000 - - - - - -
8. ihhb ENSDARG00000058815 31 1 - - - - - - - 1.000 - Indian hedgehog homolog b [Source:ZFIN;Acc:ZDB-GENE-980526-135]
9. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - 1.000 -
10. 5S_rRNA_16 5S_rRNA_16 10 1 - - - - - - - 1.000 -
11. vtg1 ENSDARG00000092233 1 1 - - - - - - - 1.000 - vitellogenin 1 [Source:ZFIN;Acc:ZDB-GENE-001201-1]
12. cd44a ENSDARG00000087863 4 1 - - 1.000 - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
13. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - - 1.000 -
14. stoml3a ENSDARG00000079914 4 1 - - - - - - - 1.000 - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
15. PEG3_31 PEG3_31 6 1 - - - - - - - 1.000 -
16. PEG3_19 PEG3_19 29 1 - - - - - - - 1.000 -
17. manba_1 ENSDARG00000008238 8 1 - - - - - - - 1.000 - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
18. zgc:112234_7 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 1 1 - - - - - - - 1.000 - zgc:112234 [Source:NCBI gene;Acc:554097]
19. BX569789.2 BX569789.2 12 1 - - 1.000 - - - - - -
20. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - - - - - - - 1.000 -
21. PEG3_25 PEG3_25 0 1 - - - - - - - 1.000 -
22. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - - - - - 1.000 -
23. zgc:195175 ENSDARG00000069311, ENSDARG00000111510 1 1 - - - - - - - 1.000 - zgc:195175 [Source:ZFIN;Acc:ZDB-GENE-081022-191]
24. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - - - - - 1.000 -
25. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - - 1.000 - - - - - -
26. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - 1.000 - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
27. ankrd34bb ENSDARG00000061641 23 1 - - - - - - - 1.000 - ankyrin repeat domain 34Bb [Source:ZFIN;Acc:ZDB-GENE-060526-101]
28. CABZ01024686.1 CABZ01024686.1 1 1 - - - - - - - 1.000 -
29. ZNF337_19 ZNF337_19 3 1 - - - - - - - 1.000 -
30. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
31. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1 - - 1.000 - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
32. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - 1.000 - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
33. CMAS CMAS 10 1 - - - - - - - 1.000 -
34. CABZ01023255.1 ENSDARG00000099984 13 1 - - 1.000 - - - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
35. si:ch73-176g19.2 si:ch73-176g19.2 2 1 - - - - - - - 1.000 -
36. si:ch211-150h8.2 si:ch211-150h8.2 0 1 - - - - - - - 1.000 -
37. NMI 3 1 - - - - - - - 1.000 - N-myc (and STAT) interactor
38. ZNF800 ZNF800 72 1 - - - - - 1.000 - - -
39. crebl2 ENSDARG00000104049 16 1 - - 1.000 - - - - - - cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
40. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1 - - 1.000 - - - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
41. C20H1orf95 C20H1orf95 12 1 - - - - - - - 1.000 -
42. si:dkey-45j10.2 si:dkey-45j10.2 5 1 - - 1.000 - - - - - -
43. si:ch211-59g22.1 si:ch211-59g22.1 0 1 - - - - - - - 1.000 -
44. cyp2k17 ENSDARG00000104529 1 1 - - 1.000 - - - - - - cytochrome P450, family 2, subfamily K, polypeptide17 [Source:ZFIN;Acc:ZDB-GENE-070424-41]
45. si:dkey-14d8.7 ENSDARG00000045834 5 1 - - - - - - - 1.000 - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
46. slc25a29 ENSDARG00000057352 9 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
47. clcn2 clcn2 13 1 - - 1.000 - - - - - -
48. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 1 - - 1.000 - - - - - - transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
49. TOX4 TOX4 0 1 - - - - - - - 1.000 -
50. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 0.994 - - 0.994 - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
51. CABZ01056821.2 CABZ01056821.2 5 0.992 - - 0.992 - - - - - -
52. si:dkey-111b14.2 si:dkey-111b14.2 25 0.984 - - 0.984 - - - - - -
53. CABZ01070631.1 ENSDARG00000110183 6 0.982 - - 0.982 - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
54. BX323793.3 BX323793.3 7 0.982 - - 0.982 - - - - - -
55. pak1_1 ENSDARG00000103959 28 0.975 - - 0.975 - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
56. hydin ENSDARG00000056764, ENSDARG00000114934 16 0.973 - - 0.973 - - - - - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
57. dnah9 ENSDARG00000103383 2 0.957 - - 0.957 - - - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
58. agxta ENSDARG00000052099 65 0.953 - - 0.953 - - - - - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
59. BX469910.2 ENSDARG00000096127 6 0.953 - - 0.953 - - - - - -
60. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 0.952 - - 0.952 - - - - - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
61. ms4a17a.2 ENSDARG00000105674 32 0.951 - - - - - 0.951 - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
62. ube2l3b ENSDARG00000027141 26 0.947 - - 0.947 - - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
63. CU633740.1 CU633740.1 8 0.946 - - 0.946 - - - - - -
64. zgc:173652_1 4 0.945 - - 0.945 - - - - - - zgc:173652
65. kcnab1 kcnab1 10 0.934 - - 0.934 - - - - - -
66. si:dkey-57h18.2 33 0.93 - - 0.930 - - - - - - si:dkey-57h18.2, transcript variant X1
67. si:dkey-109j17.5 ENSDARG00000104891 2 0.928 - - - - - - - 0.928 - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
68. kif26bb ENSDARG00000024575 18 0.922 - - - - - 0.922 - - - kinesin family member 26Bb [Source:ZFIN;Acc:ZDB-GENE-041001-188]
69. si:dkey-1d7.3 ENSDARG00000075837 18 0.921 - - 0.921 - - - - - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
70. sumo2a ENSDARG00000104390 4 0.918 - - 0.918 - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
71. zgc:113220 ENSDARG00000014775 235 0.914 - - - - - 0.914 - - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
72. si:dkey-220a11.9 si:dkey-220a11.9 10 0.914 - - 0.914 - - - - - -
73. mapk9 ENSDARG00000077364 38 0.91 - - 0.910 - - - - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
74. zdhhc12a ENSDARG00000076632 13 0.908 - - 0.908 - - - - - - zinc finger, DHHC-type containing 12a [Source:ZFIN;Acc:ZDB-GENE-081104-40]
75. kcnh2 kcnh2 76 0.906 - - 0.906 - - - - - -
76. wisp1a ENSDARG00000054331 26 0.904 - - 0.904 - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
77. pbx3b ENSDARG00000013615, ENSDARG00000110194 11 0.904 - - 0.904 - - - - - - pre-B-cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-000405-3]
78. si:ch211-207c7.6 si:ch211-207c7.6 23 0.902 - - 0.902 - - - - - -
79. si:dkey-47k16.4_1 ENSDARG00000113005 5 0.895 - - 0.895 - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
80. wu:fb63a08 38 0.893 - - - - - - - 0.893 - wu:fb63a08
81. ankef1b ENSDARG00000060211 12 0.886 - - 0.886 - - - - - - ankyrin repeat and EF-hand domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060810-68]
82. si:ch211-209n20.1 ENSDARG00000099382 2 0.881 - - 0.881 - - - - - - si:ch211-209n20.1 [Source:ZFIN;Acc:ZDB-GENE-070705-98]
83. NFAT5 NFAT5 62 0.878 - - 0.878 - - - - - -
84. CU459160.1 CU459160.1 104 0.876 - - 0.876 - - - - - -
85. si:dkey-30f3.2 ENSDARG00000098087 6 0.875 - - - - - - - 0.875 - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
86. CABZ01074181.1 CABZ01074181.1 396 0.873 - - - - - 0.873 - - -
87. CT030712.1 ENSDARG00000044355 83 0.868 - - - - - - - 0.868 - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
88. BICD1 BICD1 9 0.866 - - 0.866 - - - - - -
89. foxp3a ENSDARG00000055750 15 0.862 - - 0.862 - - - - - - forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2]
90. CABZ01055343.2_1 CABZ01055343.2_1 6 0.861 - - 0.861 - - - - - -
91. plek ENSDARG00000104325 21 0.86 - - 0.860 - - - - - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
92. si:ch211-139n6.3 ENSDARG00000093230 147 0.855 - - 0.855 - - - - - - si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
93. BX323793.4 BX323793.4 8 0.855 - - 0.855 - - - - - -
94. HYAL1 ENSDARG00000059916 134 0.85 - - - - - 0.850 - - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
95. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.847 - - - - - 0.847 - - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
96. asap3 ENSDARG00000021896 19 0.846 - - 0.846 - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
97. CT573256.1 ENSDARG00000091657 18 0.84 - - 0.840 - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
98. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 0.839 - - - - - 0.839 - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
99. LRRC41 LRRC41 11 0.837 - - - - - 0.837 - - -
100. opn1mw4 ENSDARG00000000638 2 0.837 - - - - - 0.837 - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]

There are 177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA