Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP

Gene Name Gene ID Reads Annotation
Metazoa_SRP Metazoa_SRP 1










Genes with expression patterns similar to Metazoa_SRP

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Metazoa_SRP Metazoa_SRP 1 2 - 1.000 - - - - - - 1.000
2. htr5al htr5al 6 2 - 1.000 - - - - - - 1.000
3. CABZ01081747.2 CABZ01081747.2 9 2 - 1.000 - - - - - - 1.000
4. si:ch211-197g22.1 si:ch211-197g22.1 1 2 - 1.000 - - - - - - 1.000
5. pax6l pax6l 54 1.767 - 0.910 - - - - - - 0.857
6. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
7. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
8. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
9. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
10. si:dkey-61f9.2 2 1 - 1.000 - - - - - - - si:dkey-61f9.2
11. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
12. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
13. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
14. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
15. NLRP1 NLRP1 54 1 - 1.000 - - - - - - -
16. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
17. cyp4f3 ENSDARG00000053530 10 1 - 1.000 - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
18. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
19. zbtb14 ENSDARG00000098273 36 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
20. RBM33_1 RBM33_1 7 1 - 1.000 - - - - - - -
21. NPM2 NPM2 41 1 - - - - - - - - 1.000
22. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
23. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
24. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
25. CABZ01044346.1 CABZ01044346.1 12 1 - 1.000 - - - - - - -
26. AL935186.2 ENSDARG00000097345 6 1 - 1.000 - - - - - - -
27. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
28. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
29. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
30. BX664622.3 BX664622.3 42 1 - 1.000 - - - - - - -
31. vav3a ENSDARG00000086623 498 1 - 1.000 - - - - - - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
32. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
33. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
34. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
35. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
36. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
37. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
38. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
39. taf4b ENSDARG00000075732 3 1 - 1.000 - - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
40. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
41. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
42. gcgb ENSDARG00000040907 182 1 - 1.000 - - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
43. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
44. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
45. PLA2R1 ENSDARG00000077474 45 1 - 1.000 - - - - - - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
46. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
47. CKMT2 CKMT2 10 1 - 1.000 - - - - - - -
48. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
49. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - 1.000 - - - - - - -
50. tnfrsfa ENSDARG00000004451 4 1 - 1.000 - - - - - - - tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
51. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
52. SLC47A1_2 SLC47A1_2 50 1 - 1.000 - - - - - - -
53. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
54. CABZ01060296.1 CABZ01060296.1 9 1 - 1.000 - - - - - - -
55. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
56. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - 1.000 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
57. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
58. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
59. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
60. si:dkey-91i10.2 ENSDARG00000074034 334 1 - 1.000 - - - - - - - si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
61. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - 1.000 - - - - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
62. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
63. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
64. C11H3orf83 C11H3orf83 30 1 - 1.000 - - - - - - -
65. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
66. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
67. CCDC180 ENSDARG00000032372 21 1 - 1.000 - - - - - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
68. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
69. si:dkey-45d16.4 72 1 - 1.000 - - - - - - - si:dkey-45d16.4
70. fbxl8 ENSDARG00000054222 3 1 - 1.000 - - - - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
71. si:dkey-54f18.2 si:dkey-54f18.2 27 1 - 1.000 - - - - - - -
72. CR762486.1 CR762486.1 2 1 - 1.000 - - - - - - -
73. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
74. GGT5 GGT5 1 1 - - - - - - - - 1.000
75. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
76. dym ENSDARG00000042555 1 1 - 1.000 - - - - - - - dymeclin [Source:ZFIN;Acc:ZDB-GENE-091204-348]
77. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
78. si:dkey-47k16.4 ENSDARG00000113005 87 1 - 1.000 - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
79. ARID5B ENSDARG00000037196 165 1 - 1.000 - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
80. CR391924.1 CR391924.1 5 1 - 1.000 - - - - - - -
81. LPL ENSDARG00000087697 18 1 - 1.000 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
82. tmem232 ENSDARG00000067646 4 1 - 1.000 - - - - - - - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
83. BX682234.1 ENSDARG00000074732 5 1 - 1.000 - - - - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
84. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
85. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
86. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
87. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
88. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
89. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
90. 5_8S_rRNA 5_8S_rRNA 24 1 - 1.000 - - - - - - -
91. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
92. si:dkey-77p23.2 si:dkey-77p23.2 22 1 - 1.000 - - - - - - -
93. grk1a ENSDARG00000058803 13 1 - 1.000 - - - - - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
94. si:ch73-389b16.2 ENSDARG00000103802 340 1 - 1.000 - - - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
95. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
96. rps8b ENSDARG00000057368 68 1 - 1.000 - - - - - - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
97. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
98. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
99. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
100. cx52.9 ENSDARG00000086453 7 1 - 1.000 - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]

There are 381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA