Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Metazoa_SRP

Gene Name Gene ID Reads Annotation
Metazoa_SRP Metazoa_SRP 1










Genes with expression patterns similar to Metazoa_SRP

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-197g22.1 si:ch211-197g22.1 1 2 - 1.000 - - - - - - 1.000
2. CABZ01081747.2 CABZ01081747.2 9 2 - 1.000 - - - - - - 1.000
3. htr5al htr5al 6 2 - 1.000 - - - - - - 1.000
4. Metazoa_SRP Metazoa_SRP 1 2 - 1.000 - - - - - - 1.000
5. pax6l pax6l 54 1.767 - 0.910 - - - - - - 0.857
6. PEG3_27 PEG3_27 10 1 - 1.000 - - - - - - -
7. dnase2 ENSDARG00000073893 141 1 - 1.000 - - - - - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
8. cdadc1 ENSDARG00000036650 16 1 - 1.000 - - - - - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
9. OLFM4 OLFM4 6 1 - 1.000 - - - - - - -
10. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
11. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
12. cx52.9 ENSDARG00000086453 7 1 - 1.000 - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
13. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
14. cabp2b ENSDARG00000052277 119 1 - 1.000 - - - - - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
15. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
16. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
17. si:ch73-389b16.2 ENSDARG00000103802 340 1 - 1.000 - - - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
18. FAM46D FAM46D 0 1 - - - - - - - - 1.000
19. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
20. FGFBP1 FGFBP1 7 1 - 1.000 - - - - - - -
21. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
22. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
23. DSEL DSEL 1 1 - - - - - - - - 1.000
24. CCDC180 ENSDARG00000032372 21 1 - 1.000 - - - - - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
25. dym ENSDARG00000042555 1 1 - 1.000 - - - - - - - dymeclin [Source:ZFIN;Acc:ZDB-GENE-091204-348]
26. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
27. CR762486.1 CR762486.1 2 1 - 1.000 - - - - - - -
28. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
29. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
30. gcgb ENSDARG00000040907 182 1 - 1.000 - - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
31. grk1a ENSDARG00000058803 13 1 - 1.000 - - - - - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
32. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
33. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
34. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
35. ENSDARG00000089996 ENSDARG00000089996 17 1 - 1.000 - - - - - - -
36. ARID5B ENSDARG00000037196 165 1 - 1.000 - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
37. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
38. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
39. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
40. LPL ENSDARG00000087697 18 1 - 1.000 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
41. KBTBD3 ENSDARG00000060512 42 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
42. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
43. si:dkey-228l14.2 si:dkey-228l14.2 1 1 - 1.000 - - - - - - -
44. angptl6 ENSDARG00000020265 273 1 - 1.000 - - - - - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
45. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
46. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
47. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
48. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
49. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
50. zar1 ENSDARG00000019706 8 1 - 1.000 - - - - - - - zygote arrest 1 [Source:ZFIN;Acc:ZDB-GENE-030818-1]
51. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
52. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
53. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
54. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
55. AKNA ENSDARG00000087110 39 1 - 1.000 - - - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
56. BX664622.3 BX664622.3 42 1 - 1.000 - - - - - - -
57. C22H1orf53 C22H1orf53 24 1 - 1.000 - - - - - - -
58. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
59. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
60. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
61. mvb12bb ENSDARG00000079478 9 1 - - - - - - - - 1.000 multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
62. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
63. TMPRSS7 5 1 - - - - - - - - 1.000 transmembrane protease, serine 7
64. CR790368.1 ENSDARG00000100936 20 1 - 1.000 - - - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
65. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
66. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
67. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - 1.000 - - - - - - -
68. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
69. twf2b ENSDARG00000009727, ENSDARG00000112161 49 1 - 1.000 - - - - - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
70. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - 1.000 - - - - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
71. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
72. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
73. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
74. coch ENSDARG00000024032 7 1 - 1.000 - - - - - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
75. si:ch211-224b1.4 si:ch211-224b1.4 29 1 - 1.000 - - - - - - -
76. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - - - - - - - 1.000
77. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
78. 5_8S_rRNA 5_8S_rRNA 24 1 - 1.000 - - - - - - -
79. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
80. BX546499.1 ENSDARG00000092602 1 1 - - - - - - - - 1.000
81. nup85 ENSDARG00000098679 2 1 - 1.000 - - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
82. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
83. tnfrsfa ENSDARG00000004451 4 1 - 1.000 - - - - - - - tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
84. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
85. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - 1.000 - - - - - - -
86. si:dkey-45d16.4 72 1 - 1.000 - - - - - - - si:dkey-45d16.4
87. si:ch211-262n1.5 12 1 - 1.000 - - - - - - - si:ch211-262n1.5
88. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
89. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
90. ddit4 ENSDARG00000037618 37 1 - 1.000 - - - - - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
91. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
92. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - 1.000 - - - - - - -
93. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
94. PEG3_10 PEG3_10 45 1 - 1.000 - - - - - - -
95. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
96. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
97. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
98. rps8b ENSDARG00000057368 68 1 - 1.000 - - - - - - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
99. AL935186.2 ENSDARG00000097345 6 1 - 1.000 - - - - - - -
100. TDRD6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]

There are 381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA