Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MYOD1

Gene Name Gene ID Reads Annotation
MYOD1 ENSGALG00000006216 568 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]











Genes with expression patterns similar to MYOD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MYOD1 ENSGALG00000006216 568 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
2. ACTC1 ENSGALG00000009844 20914 2.502 - - - - - 0.936 - - 0.767 0.799 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. TNNI1 ENSGALG00000000313 4069 1.635 - - - - - 0.928 - - 0.707 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
4. RBM24 ENSGALG00000012712 4138 1.631 - - - - - 0.885 - - - 0.746 RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
5. BHMT ENSGALG00000004518 4700 1.626 - - - - - 0.789 - - - 0.837 betaine--homocysteine S-methyltransferase
6. MYF5 ENSGALG00000028091 1965 1.616 - - 0.744 - - 0.872 - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
7. SMOC1 ENSGALG00000009415 2403 1.545 - - 0.701 - - - - - - 0.844 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
8. TCF15 ENSGALG00000026276 3646 1.499 - - 0.778 - - - - - 0.721 - transcription factor 15 [Source:NCBI gene;Acc:395788]
9. RGMA ENSGALG00000039173 12874 1.483 - - 0.711 - - 0.772 - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
10. TRIM55 ENSGALG00000041327 1097 1.476 - - - - - 0.707 - - - 0.769 tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
11. TEKT4 ENSGALG00000005247 20 0.938 - - - - - - - 0.938 - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
12. ZFYVE26 ENSGALG00000028762 18 0.938 - - - - - - - 0.938 - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
13. TDP1 ENSGALG00000010669 57 0.935 - - - - - - - 0.935 - - tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:18884]
14. ENSGALG00000023180 ENSGALG00000023180 83 0.935 - - - - - - - 0.935 - -
15. GABBR2 ENSGALG00000013200 176 0.926 - - - - - - - 0.926 - - gamma-aminobutyric acid type B receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:4507]
16. STAT1 ENSGALG00000007651 24 0.925 - - - - - - - 0.925 - - signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:424044]
17. HEMGN ENSGALG00000045740 8 0.922 - - - - - - - 0.922 - - hemogen, transcript variant X1
18. RASEF ENSGALG00000012576 155 0.9 - - - - - - - 0.900 - - RAS and EF-hand domain containing [Source:HGNC Symbol;Acc:HGNC:26464]
19. UNC45B ENSGALG00000002186 399 0.883 - - - - - 0.883 - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
20. MYF6 ENSGALG00000010936 1143 0.874 - - - - - 0.874 - - - - myogenic factor 6 [Source:NCBI gene;Acc:417873]
21. EN1 ENSGALG00000042389 3051 0.864 - - - - - 0.864 - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
22. MCM9 ENSGALG00000014883 8 0.86 - - - - - - - 0.860 - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
23. RPS6KA6 ENSGALG00000007097 94 0.86 - - - - - - - 0.860 - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
24. FGA ENSGALG00000009266 291 0.86 - - - - - - - 0.860 - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
25. SNX25 ENSGALG00000010610 31 0.86 - - - - - - - 0.860 - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
26. BOK ENSGALG00000005772 117 0.86 - - - - - - - 0.860 - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
27. ALDH6A1 ENSGALG00000010211 29 0.86 - - - - - - - 0.860 - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
28. AK8 ENSGALG00000040923 10 0.86 - - - - - - - 0.860 - - adenylate kinase 8, transcript variant X1
29. SMAP2 ENSGALG00000029244 498 0.86 - - - - - - - 0.860 - - small ArfGAP2 [Source:NCBI gene;Acc:419641]
30. TTLL2 ENSGALG00000011344 14 0.86 - - - - - - - 0.860 - - tubulin tyrosine ligase like 2, transcript variant X1
31. PARP12 ENSGALG00000046187 10 0.86 - - - - - - - 0.860 - - poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
32. MEST ENSGALG00000008111 1 0.86 - - - - - - - 0.860 - - mesoderm specific transcript [Source:HGNC Symbol;Acc:HGNC:7028]
33. STARD13 ENSGALG00000017065 18 0.86 - - - - - - - 0.860 - - StAR related lipid transfer domain containing 13, transcript variant X3
34. AK7 ENSGALG00000011093 9 0.86 - - - - - - - 0.860 - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
35. SEC16A ENSGALG00000002364 19 0.86 - - - - - - - 0.860 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
36. TFRC 31 0.86 - - - - - - - 0.860 - - transferrin receptor, transcript variant X1
37. FBXO16 7 0.86 - - - - - - - 0.860 - - F-box protein 16, transcript variant X1
38. PALM ENSGALG00000026055 8 0.86 - - - - - - - 0.860 - - paralemmin [Source:NCBI gene;Acc:101750199]
39. TMEM255A ENSGALG00000008604 7 0.856 - - - - - - - 0.856 - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
40. NTRK1 ENSGALG00000019019 17 0.856 - - - - - - - 0.856 - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
41. TRIM14 ENSGALG00000015315 22 0.856 - - - - - - - 0.856 - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
42. IL13RA1 ENSGALG00000044480 24 0.856 - - - - - - - 0.856 - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
43. WDR16 WDR16 22 0.856 - - - - - - - 0.856 - -
44. RELN ENSGALG00000008193 43 0.856 - - - - - - - 0.856 - - reelin [Source:NCBI gene;Acc:427850]
45. KIAA1211 ENSGALG00000013771 135 0.855 - - - - - - - 0.855 - - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
46. TAC1 ENSGALG00000009737 2211 0.853 - - - - - - - - - 0.853 tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
47. ARSA ENSGALG00000035824 299 0.852 - - - - - - - 0.852 - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
48. GABRB3 ENSGALG00000029392 102 0.852 - - - - - - - 0.852 - - gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:396290]
49. PAX1 ENSGALG00000039040 3339 0.852 - - - - - - - - - 0.852 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
50. ENSGALG00000027002 ENSGALG00000027002 7570 0.849 - - - - - 0.849 - - - -
51. TROJANZ ENSGALG00000027747 37 0.846 - - - - - - - 0.846 - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
52. PACSIN1 ENSGALG00000002802 6 0.846 - - - - - - - 0.846 - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
53. ASB12 ENSGALG00000007594 185 0.843 - - - - - - - 0.843 - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
54. gga-mir-7474 ENSGALG00000033766 5727 0.842 - - - - - - - - - 0.842 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
55. JSC JSC 7982 0.834 - - - - - - - - - 0.834
56. CELF5 ENSGALG00000026716 2 0.832 - - - - - 0.832 - - - - CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
57. MYO1E ENSGALG00000004150 40 0.832 - - - - - - - 0.832 - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
58. FOXD1 ENSGALG00000012644 2296 0.829 - - - - - - - - - 0.829 forkhead box D1 [Source:NCBI gene;Acc:396109]
59. OCM2 ENSGALG00000003465 74 0.828 - - - - - - - - 0.828 - oncomodulin 2 [Source:NCBI gene;Acc:396531]
60. ZNF488 ENSGALG00000005975 82 0.828 - - - - - 0.828 - - - - zinc finger protein 488, transcript variant X2
61. NRIP3 ENSGALG00000005903 58 0.822 - - - - - 0.822 - - - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
62. FHIT ENSGALG00000007172 580 0.82 - - - - - 0.820 - - - - fragile histidine triad [Source:NCBI gene;Acc:416071]
63. KERA ENSGALG00000011270 4204 0.81 - - - - - - - - - 0.810 keratocan [Source:NCBI gene;Acc:373995]
64. LECT1 LECT1 12694 0.808 - - - - - - - - - 0.808
65. ARMC2 ENSGALG00000015289 18 0.807 - - - - - - - 0.807 - - armadillo repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:23045]
66. SLC35B2 ENSGALG00000010174 3 0.807 - - - - - - - 0.807 - - solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]
67. MPZL1 ENSGALG00000015438 72 0.805 - - - - - - - 0.805 - - myelin protein zero like 1 [Source:HGNC Symbol;Acc:HGNC:7226]
68. CA12 ENSGALG00000003456 62 0.803 - - - - - - - 0.803 - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
69. GPR157 ENSGALG00000002473 231 0.802 - - - - - 0.802 - - - - G protein-coupled receptor 157 [Source:HGNC Symbol;Acc:HGNC:23687]
70. RDH11 ENSGALG00000009538 110 0.799 - - - - - - - 0.799 - - retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]
71. PALMD ENSGALG00000005442 901 0.795 - - - - - - - - - 0.795 palmdelphin [Source:NCBI gene;Acc:424475]
72. CYP1B1 ENSGALG00000025822 3143 0.791 - - - - - - - - - 0.791 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
73. FST ENSGALG00000014908 3182 0.79 - - - - - 0.790 - - - - follistatin [Source:NCBI gene;Acc:396119]
74. TNNT3 ENSGALG00000006572 1652 0.789 - - - - - - - - - 0.789 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
75. TITIN TITIN 589 0.784 - - - - - - - - - 0.784
76. MYOG ENSGALG00000000172 460 0.783 - - - - - 0.783 - - - - myogenin [Source:NCBI gene;Acc:374004]
77. STK32B ENSGALG00000029510 95 0.782 - - - - - - - 0.782 - - serine/threonine kinase 32B [Source:HGNC Symbol;Acc:HGNC:14217]
78. SMEK1 SMEK1 95 0.779 - - - - - - - 0.779 - -
79. THRSPB 39 0.777 - - - - - 0.777 - - - - thyroid hormone responsive spot 14 beta
80. BPIFB8 BPIFB8 49 0.777 - - - - - 0.777 - - - -
81. BRINP3 ENSGALG00000033407 40 0.776 - - - - - - - 0.776 - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
82. SNORA17 SNORA17 39 0.773 - - - - - - - 0.773 - -
83. gga-mir-1652 ENSGALG00000025444 119 0.773 - - - - - - - 0.773 - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
84. AKAP11 ENSGALG00000022739 82 0.773 - - - - - - - 0.773 - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
85. CLCA2 8 0.773 - - - - - - - 0.773 - - chloride channel accessory 2, transcript variant X1
86. HSPB2 ENSGALG00000040842 197 0.771 - - - 0.771 - - - - - - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
87. FNDC1 ENSGALG00000011663 1040 0.763 - - - - - - - - - 0.763 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
88. SYNPR ENSGALG00000007284 1368 0.763 - - - - - 0.763 - - - - synaptoporin [Source:NCBI gene;Acc:396359]
89. CD109 ENSGALG00000015910 11 0.762 - - - - - 0.762 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
90. CBS ENSGALG00000016196 8 0.76 - - - - - 0.760 - - - - cystathionine-beta-synthase, transcript variant X3
91. PAX-6 PAX-6 2650 0.758 - - - - - 0.758 - - - -
92. COL9A3 ENSGALG00000005628 2842 0.758 - - - - - - - - - 0.758 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
93. C1QTNF3 ENSGALG00000027887 8646 0.755 - - - - - 0.755 - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
94. HSPB8 ENSGALG00000007383 5333 0.755 - - - - - 0.755 - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
95. CAT-1 CAT-1 115 0.754 - - - - - - - 0.754 - -
96. SFRP2 ENSGALG00000009241 4716 0.751 - - - - - 0.751 - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
97. IGSF11 ENSGALG00000015084 194 0.749 - - - - - - - 0.749 - - Gallus gallus immunoglobulin superfamily member 11 (IGSF11), mRNA. [Source:RefSeq mRNA;Acc:NM_001318422]
98. ARL8A_1 ENSGALG00000000606 23 0.749 - - - - - - - 0.749 - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
99. MYL2_1 ENSGALG00000004582 2367 0.747 - - - - - - - - 0.747 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
100. ENPP2 ENSGALG00000032746 6086 0.745 - - - - - 0.745 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]

There are 40 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA