Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MYO5A

Gene Name Gene ID Reads Annotation
MYO5A ENSGALG00000031987 2469 myosin VA [Source:NCBI gene;Acc:396237]











Genes with expression patterns similar to MYO5A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MYO5A ENSGALG00000031987 2469 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 myosin VA [Source:NCBI gene;Acc:396237]
2. UPF2 ENSGALG00000033772 9548 2.151 - - - - - - 0.731 - 0.708 0.712 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
3. FREM3 ENSGALG00000020561 1824 1.652 - - - - - - - - 0.827 0.825 FRAS1 related extracellular matrix 3
4. CRCP ENSGALG00000002587 8809 1.628 - - 0.830 - - - - - - 0.798 CGRP receptor component [Source:NCBI gene;Acc:396022]
5. ATP6V0C ENSGALG00000009229 125870 1.614 - - 0.764 - - - - - - 0.850 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
6. FNBP1L ENSGALG00000005850 9219 1.582 - - 0.742 - - - - - - 0.840 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
7. NSA2 ENSGALG00000014942 45193 1.577 - - 0.823 - - - - - 0.754 - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
8. YAF2 ENSGALG00000009540 8452 1.569 - - 0.785 - - - - - - 0.784 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
9. FAM188B 2097 1.567 - - 0.856 - - - - 0.711 - - family with sequence similarity 188 member B
10. PTX3 ENSGALG00000028284 2984 1.551 - - - - - - - - 0.702 0.849 pentraxin 3 [Source:NCBI gene;Acc:548626]
11. HOXA5 ENSGALG00000025929 6231 1.55 - - - - - - 0.733 - - 0.817 homeobox A5 [Source:NCBI gene;Acc:100858404]
12. NFI1 NFI1 6210 1.539 - - 0.823 - - - 0.716 - - -
13. CHMP4B ENSGALG00000002095 17422 1.538 - - 0.714 - - - - - - 0.824 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
14. SP3 ENSGALG00000031796 8997 1.523 - - - - - - 0.730 - - 0.793 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
15. GCSH ENSGALG00000032679 29231 1.521 - - 0.739 - - - - - - 0.782 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
16. KIF11 ENSGALG00000030597 5528 1.512 - - - - - - - 0.726 - 0.786 kinesin family member 11 [Source:NCBI gene;Acc:423809]
17. HDAC2 ENSGALG00000014991 23458 1.504 - - 0.701 - - - - - - 0.803 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
18. SMC4 ENSGALG00000009553 15715 1.498 - - 0.721 - - - - - - 0.777 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
19. SLC30A5 ENSGALG00000014787 5573 1.494 - - - - - - 0.704 - - 0.790 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
20. ZBED4 ENSGALG00000032659 5313 1.483 - - - - - - 0.774 - - 0.709 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
21. COL18A1 ENSGALG00000038311 11934 1.458 - - - - - - - 0.708 0.750 - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
22. RAD18 ENSGALG00000008368 7214 1.457 - - 0.746 - - - - - - 0.711 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
23. BAG1 ENSGALG00000013157 4014 1.445 - - - - - - 0.722 - - 0.723 BCL2 associated athanogene 1 [Source:NCBI gene;Acc:420967]
24. ECI2 ENSGALG00000012809 3692 1.439 - - - - - - 0.719 - - 0.720 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
25. TCF25 ENSGALG00000000129 7587 0.953 - - - - - - - - - 0.953 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
26. KIDINS220 ENSGALG00000016409 854 0.946 - - - - - - - - - 0.946 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
27. SPATA20 ENSGALG00000006857 3506 0.933 - - - - - - - - - 0.933 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
28. CCDC66 ENSGALG00000005450 1262 0.928 - - - - - - - - - 0.928 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
29. CASP8AP2 ENSGALG00000015611 5657 0.927 - - - - - - - - - 0.927 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
30. MFSD1 ENSGALG00000009593 3116 0.924 - - - - - - - - - 0.924 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
31. LOC770492 ENSGALG00000027778 695 0.919 - - - - - - - - - 0.919 ras-related and estrogen-regulated growth inhibitor-like
32. VWA9 ENSGALG00000007491 4790 0.915 - - - - - - - - - 0.915 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
33. WRNIP1 ENSGALG00000012856 1954 0.914 - - - - - - - - - 0.914 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
34. KLC1 ENSGALG00000011528 1621 0.912 - - - - - - - - - 0.912 kinesin light chain 1, transcript variant X6
35. KIAA1551 ENSGALG00000045168 3435 0.912 - - - - - - - - - 0.912 KIAA1551, transcript variant X1
36. B3GALTL B3GALTL 4128 0.911 - - - - - - - - - 0.911
37. HELLS ENSGALG00000005451 7094 0.91 - - - - - - - - - 0.910 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
38. SLC39A6 ENSGALG00000013209 1754 0.908 - - - - - - - - - 0.908 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
39. C9orf89 C9orf89 3056 0.906 - - - - - - - - - 0.906
40. ARID1B ENSGALG00000013683 3397 0.906 - - - - - - - - - 0.906 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
41. FAM171B ENSGALG00000002646 837 0.905 - - 0.905 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
42. BRT-1 BRT-1 26083 0.905 - - - - - - - - - 0.905
43. SDAD1 ENSGALG00000011543 5191 0.904 - - 0.904 - - - - - - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
44. F2RL2 ENSGALG00000023379 1049 0.902 - - - - - - - - - 0.902 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
45. ANXA8 ENSGALG00000005956 479 0.9 - - 0.900 - - - - - - - annexin A8, transcript variant X1
46. EMILIN2 ENSGALG00000032997 2460 0.897 - - 0.897 - - - - - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
47. RHOT1 ENSGALG00000003397 5149 0.897 - - - - - - - - - 0.897 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
48. SUV39H2 ENSGALG00000013920 4360 0.896 - - - - - - - - - 0.896 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
49. CETN1 ENSGALG00000026741 7243 0.894 - - - - - - - - - 0.894 centrin 1 [Source:NCBI gene;Acc:422668]
50. RAB10 ENSGALG00000016535 5272 0.894 - - 0.894 - - - - - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
51. SLC35B1 ENSGALG00000035057 10683 0.893 - - - - - - - - - 0.893 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
52. FAT1 ENSGALG00000013579 6030 0.893 - - 0.893 - - - - - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
53. CYP27A1 ENSGALG00000002470 321 0.891 - - 0.891 - - - - - - - cytochrome P450 family 27 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2605]
54. C1orf198 ENSGALG00000026600 5651 0.887 - - - - - - - - - 0.887 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
55. MGA 1911 0.885 - - - - - - - - - 0.885 MGA, MAX dimerization protein, transcript variant X15
56. CSRP2BP CSRP2BP 4679 0.884 - - - - - - - - - 0.884
57. DDX1 ENSGALG00000016461 15157 0.884 - - - - - - - - - 0.884 DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
58. TXNDC12 ENSGALG00000010569 13822 0.884 - - - - - - - - - 0.884 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
59. GPN2 ENSGALG00000027909 5204 0.883 - - - - - - - - - 0.883 GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]
60. ZC3H18 2569 0.882 - - 0.882 - - - - - - - zinc finger CCCH-type containing 18, transcript variant X3
61. CKAP2 ENSGALG00000017025 25020 0.88 - - - - - - - - - 0.880 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
62. SSR2 ENSGALG00000000764 32190 0.88 - - - - - - - - - 0.880 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
63. HNRNPD ENSGALG00000011184 10686 0.879 - - - - - - - - - 0.879 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
64. SPERT ENSGALG00000016981 145 0.876 - - - - - - - - - 0.876 spermatid associated [Source:NCBI gene;Acc:418848]
65. GTF2IRD1 ENSGALG00000001263 14716 0.875 - - 0.875 - - - - - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
66. SLC9A3R2 ENSGALG00000005608 4220 0.874 - - 0.874 - - - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
67. UFD1L 12964 0.873 - - - - - - - - - 0.873 ubiquitin fusion degradation 1 like (yeast)
68. RPF2 ENSGALG00000037087 12788 0.873 - - - - - - - - - 0.873 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
69. EAPP ENSGALG00000010007 5080 0.873 - - - - - - - - - 0.873 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
70. SH3BP2 ENSGALG00000015665 431 0.872 - - - - - - - - - 0.872 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
71. PDE3B ENSGALG00000006035 3732 0.869 - - - - - - - - - 0.869 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
72. RAB34 ENSGALG00000026315 1193 0.869 - - 0.869 - - - - - - - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
73. YWHAQ ENSGALG00000016433 3450 0.868 - - 0.868 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
74. POLN ENSGALG00000015692 1714 0.866 - - - - - - - - - 0.866 DNA polymerase nu [Source:HGNC Symbol;Acc:HGNC:18870]
75. YBX1 ENSGALG00000004848 20992 0.865 - - 0.865 - - - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
76. FRMD3 ENSGALG00000012577 999 0.865 - - - - - - - - - 0.865 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
77. SOX6 ENSGALG00000006074 102 0.865 - - - - - - - - - 0.865 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
78. MTDH ENSGALG00000034050 9525 0.863 - - - - - - - - - 0.863 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
79. FSTL4 ENSGALG00000031487 529 0.863 - - - - - - - - - 0.863 follistatin like 4 [Source:NCBI gene;Acc:395163]
80. SMNDC1 ENSGALG00000008561 14415 0.863 - - - - - - - - - 0.863 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
81. AP1G1 12403 0.862 - - - - - - - - - 0.862 adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
82. CCT8 ENSGALG00000015821 12161 0.862 - - - - - - - - - 0.862 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
83. CXADR ENSGALG00000015701 96 0.862 - - - - - - - - - 0.862 coxsackie virus and adenovirus receptor, transcript variant X2
84. SOAT1 ENSGALG00000004205 2394 0.862 - - 0.862 - - - - - - - sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]
85. ZNF6 ZNF6 138 0.862 - - - - - - - - - 0.862
86. CPNE2 ENSGALG00000001316 236 0.861 - - - - - - - - - 0.861 copine 2 [Source:NCBI gene;Acc:415646]
87. 5S_2 5S_2 58 0.86 - - - - - - - - - 0.860
88. APBA3 ENSGALG00000000740 1249 0.86 - - - - - - - - - 0.860 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
89. FAM190B FAM190B 165 0.86 - - - - - - - - - 0.860
90. IL10R2 IL10R2 72 0.86 - - - - - - - - - 0.860
91. IDH1 ENSGALG00000008818 17613 0.859 - - 0.859 - - - - - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
92. U3 U3 1604 0.859 - - - - - - - - - 0.859
93. RAD51AP1 ENSGALG00000017290 3807 0.859 - - 0.859 - - - - - - - RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]
94. SLC2A3 SLC2A3 527 0.858 - - - - - - - - - 0.858
95. ITSN2 ENSGALG00000016504 651 0.858 - - - - - - - - - 0.858 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
96. MAN2B2 ENSGALG00000015537 2267 0.857 - - 0.857 - - - - - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
97. MYH1D ENSGALG00000027323 365 0.857 - - - - - - - - - 0.857 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
98. PM20D2 ENSGALG00000015779 1301 0.857 - - - - - - - - - 0.857 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
99. AIMP1 ENSGALG00000010553 17994 0.857 - - - - - - - - - 0.857 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
100. HSD17B4 ENSGALG00000002187 9581 0.857 - - - - - - - - - 0.857 hydroxysteroid 17-beta dehydrogenase 4 [Source:NCBI gene;Acc:395785]

There are 508 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA