Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MYL3

Gene Name Gene ID Reads Annotation
MYL3 ENSGALG00000005448 3379 myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]











Genes with expression patterns similar to MYL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MYL3 ENSGALG00000005448 3379 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
2. TNNI1 ENSGALG00000000313 4069 3.856 0.823 0.760 0.816 - 0.718 - - - 0.739 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
3. ACTC1 ENSGALG00000009844 20914 3.344 0.951 0.753 0.890 - - - - - 0.750 - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
4. gga-mir-7474 ENSGALG00000033766 5727 2.549 0.894 - 0.801 - - - - - 0.854 - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
5. TMEM182 ENSGALG00000038936 274 2.473 - - 0.887 - 0.800 - - - 0.786 - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
6. UNC45B ENSGALG00000002186 399 2.36 0.854 0.718 - - - - - - 0.788 - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
7. TNNT3 ENSGALG00000006572 1652 2.354 - 0.704 0.884 - 0.766 - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
8. MYL2_1 ENSGALG00000004582 2367 2.316 - 0.797 0.767 - - - - - 0.752 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
9. TRIM55 ENSGALG00000041327 1097 1.804 0.944 - 0.860 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
10. ACTN2 ENSGALG00000014463 1724 1.798 0.934 - - - - - - - 0.864 - actinin alpha 2 [Source:NCBI gene;Acc:396263]
11. EIF4ENIF1 ENSGALG00000006898 24 1.748 - - - - - - 0.899 0.849 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
12. MYL2 ENSGALG00000004582 2245 1.735 0.977 - 0.758 - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
13. HSPB2 ENSGALG00000040842 197 1.728 0.913 - - - - - - - 0.815 - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
14. KLHL31 ENSGALG00000016309 1518 1.707 0.849 - 0.858 - - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
15. MYH15 ENSGALG00000015358 6304 1.707 0.972 - - - - - - - 0.735 - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
16. TNNC2 ENSGALG00000006835 2963 1.685 - - 0.871 - - - - - 0.814 - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
17. RBM24 ENSGALG00000012712 4138 1.669 0.902 - 0.767 - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
18. SH3BGR ENSGALG00000016127 2561 1.669 0.870 - 0.799 - - - - - - - SH3 domain binding glutamate rich protein
19. C1QTNF3 ENSGALG00000027887 8646 1.662 - - 0.874 - - - - - 0.788 - C1q and tumor necrosis factor related protein 3, transcript variant X1
20. MYH7B ENSGALG00000030985 199 1.638 0.817 - - - - - - - - 0.821 Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
21. ACTA1 ENSGALG00000011086 2543 1.631 0.798 - 0.833 - - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
22. SMOC1 ENSGALG00000009415 2403 1.63 - - 0.759 - - - - - 0.871 - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
23. TNNT2 ENSGALG00000000302 568 1.606 0.894 - 0.712 - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
24. MYL1 ENSGALG00000002907 1300 1.582 0.723 - 0.859 - - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
25. CYP1B1 ENSGALG00000025822 3143 1.575 - - 0.714 - - - - - 0.861 - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
26. SSPN ENSGALG00000014042 638 1.562 - - 0.767 - - - 0.795 - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
27. EN1 ENSGALG00000042389 3051 1.537 - - 0.810 - - - - - 0.727 - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
28. ENSGALG00000010113 ENSGALG00000010113 508 1.524 - - 0.711 - - - - - 0.813 -
29. NGFR ENSGALG00000035950 13452 1.51 - 0.735 0.775 - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
30. TCF15 ENSGALG00000026276 3646 1.508 - - 0.802 - - - - - 0.706 - transcription factor 15 [Source:NCBI gene;Acc:395788]
31. XIRP1 ENSGALG00000006025 729 1.502 0.779 - - - - - - - 0.723 - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
32. SOX9 ENSGALG00000004386 14802 1.485 - - 0.730 - - - - - 0.755 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
33. MEOX2 ENSGALG00000010794 1556 1.48 - - 0.727 - 0.753 - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
34. EMILIN3 ENSGALG00000030012 6200 1.476 - - 0.717 - - - - - 0.759 - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
35. TPM1 ENSGALG00000003521 11894 1.464 0.732 - 0.732 - - - - - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
36. TAL2 ENSGALG00000023114 17 0.994 - - - - - 0.994 - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
37. HSPB7L ENSGALG00000028183 795 0.982 0.982 - - - - - - - - - heat shock protein beta-7-like
38. TNNC1 ENSGALG00000001459 7110 0.964 0.964 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
39. BDNF ENSGALG00000012163 159 0.96 - - - - - 0.960 - - - - brain derived neurotrophic factor [Source:NCBI gene;Acc:396186]
40. MYBPC3 ENSGALG00000008148 315 0.956 0.956 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
41. CSRP3 ENSGALG00000004044 456 0.949 0.949 - - - - - - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
42. ENSGALG00000020779 ENSGALG00000020779 19 0.948 - - - - - - 0.948 - - -
43. VCAM1 ENSGALG00000005257 102 0.936 0.936 - - - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
44. 5S 5S 0 0.929 - - - - - 0.929 - - - -
45. GZMA ENSGALG00000013548 22 0.929 - - - - - 0.929 - - - - granzyme A [Source:NCBI gene;Acc:395108]
46. NRG3 ENSGALG00000042812 10 0.929 - - - - - 0.929 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
47. PSEN2 ENSGALG00000009073 7 0.929 - - - - - 0.929 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
48. TLL2 ENSGALG00000005519 10 0.929 - - - - - 0.929 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
49. CASZ1 ENSGALG00000002888 2 0.929 - - - - - 0.929 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
50. CCDC178 6 0.929 - - - - - 0.929 - - - - coiled-coil domain containing 178, transcript variant X3
51. STAM2 ENSGALG00000012513 9 0.929 - - - - - 0.929 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
52. GRM5 ENSGALG00000017238 2 0.929 - - - - - 0.929 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
53. THBD ENSGALG00000044442 6 0.929 - - - - - 0.929 - - - - thrombomodulin
54. ALK 2 0.929 - - - - - 0.929 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
55. gga-mir-219b ENSGALG00000018278 1 0.929 - - - - - 0.929 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
56. FNIP1 ENSGALG00000017462 4 0.929 - - - - - 0.929 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
57. NGB ENSGALG00000010413 0 0.929 - - - - - 0.929 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
58. CLDN16 ENSGALG00000025821 14 0.929 - - - - - 0.929 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
59. ONECUT3 ENSGALG00000028081 1 0.929 - - - - - 0.929 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
60. CASS4 ENSGALG00000007744 10 0.929 - - - - - 0.929 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
61. IAPP ENSGALG00000013168 1 0.929 - - - - - 0.929 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
62. CNNM1 ENSGALG00000007489 43 0.929 - - - - - 0.929 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
63. ENSGALG00000023638 ENSGALG00000023638 16 0.929 - - - - - 0.929 - - - -
64. RNFT2 ENSGALG00000008217 0 0.929 - - - - - 0.929 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
65. QSOX1 ENSGALG00000003933 184 0.929 - - - - - 0.929 - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
66. ENSGALG00000021106 ENSGALG00000021106 35 0.929 - - - - - 0.929 - - - -
67. ENSGALG00000009485 ENSGALG00000009485 4 0.929 - - - - - 0.929 - - - -
68. NFATC3 ENSGALG00000003396 40 0.929 - - - - - 0.929 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
69. CHAT ENSGALG00000002289 26 0.929 - - - - - 0.929 - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
70. FAT2 ENSGALG00000004320 4 0.929 - - - - - 0.929 - - - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
71. LRRC9 2 0.929 - - - - - 0.929 - - - - leucine rich repeat containing 9
72. MMP9 ENSGALG00000006992 78 0.929 - - - - - 0.929 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
73. SNX19 ENSGALG00000001425 2 0.929 - - - - - 0.929 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
74. ASPR ASPR 1 0.929 - - - - - 0.929 - - - -
75. MFHAS1 ENSGALG00000011444 7 0.929 - - - - - 0.929 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
76. NADSYN1 ENSGALG00000004153 8 0.929 - - - - - 0.929 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
77. GDPGP1 ENSGALG00000045045 2 0.929 - - - - - 0.929 - - - - GDP-D-glucose phosphorylase 1
78. RAB43 ENSGALG00000005021 5 0.929 - - - - - 0.929 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
79. TEX33 ENSGALG00000012490 11 0.929 - - - - - 0.929 - - - - testis expressed 33, transcript variant X2
80. CCDC28A ENSGALG00000013834 8 0.929 - - - - - 0.929 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
81. CRCBL ENSGALG00000025881 3 0.929 - - - - - 0.929 - - - - cytokine receptor common subunit beta-like, transcript variant X3
82. TMEM132D ENSGALG00000002671 12 0.929 - - - - - 0.929 - - - - transmembrane protein 132D, transcript variant X6
83. VPS9D1 ENSGALG00000023468 1 0.929 - - - - - 0.929 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
84. TMEM161B ENSGALG00000010896 36 0.929 - - - - - 0.929 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
85. SNORD61 SNORD61 12 0.929 - - - - - 0.929 - - - -
86. HIAT1 HIAT1 447 0.929 - - - - - 0.929 - - - -
87. PASD1 ENSGALG00000009063 0 0.929 - - - - - 0.929 - - - - PAS domain containing repressor 1, transcript variant X4
88. ENSGALG00000028833 ENSGALG00000028833 0 0.929 - - - - - 0.929 - - - -
89. IL17RA ENSGALG00000033887 0 0.929 - - - - - 0.929 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
90. ENSGALG00000013992 ENSGALG00000013992 6 0.929 - - - - - 0.929 - - - -
91. HABP2 ENSGALG00000008905 1 0.929 - - - - - 0.929 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
92. WDR37 ENSGALG00000006749 44 0.929 - - - - - 0.929 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
93. NT5DC3 ENSGALG00000029746 1 0.929 - - - - - 0.929 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
94. FAM194B FAM194B 1 0.929 - - - - - 0.929 - - - -
95. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 0.929 - - - - - 0.929 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
96. TRPM1 ENSGALG00000003849 5 0.929 - - - - - 0.929 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
97. APBB1 ENSGALG00000046164 5 0.929 - - - - - 0.929 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
98. LOC422320 ENSGALG00000007703 6 0.929 - - - - - 0.929 - - - - ligand of Numb protein X 2-like, transcript variant X1
99. FAM46C 13 0.929 - - - - - 0.929 - - - - family with sequence similarity 46 member C
100. DAPK1 ENSGALG00000012608 17 0.929 - - - - - 0.929 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]

There are 230 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA