Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MYL1

Gene Name Gene ID Reads Annotation
MYL1 ENSGALG00000002907 1300 myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]











Genes with expression patterns similar to MYL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MYL1 ENSGALG00000002907 1300 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
2. ACTC1 ENSGALG00000009844 20914 4.21 0.775 - 0.870 0.860 0.867 - - - 0.838 - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. ACTA1 ENSGALG00000011086 2543 3.29 0.759 - 0.881 0.810 0.840 - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
4. MYL2_1 ENSGALG00000004582 2367 3.232 - 0.730 0.814 - 0.860 - - - 0.828 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
5. gga-mir-7474 ENSGALG00000033766 5727 3.162 0.805 - 0.705 0.829 0.823 - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
6. TPM1 ENSGALG00000003521 11894 3.157 0.757 - - 0.821 0.877 - - - 0.702 - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
7. TNNC2 ENSGALG00000006835 2963 3.123 - - 0.849 0.755 0.753 - - - 0.766 - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
8. TNNT3 ENSGALG00000006572 1652 3.009 - 0.705 0.817 0.758 - - - - 0.729 - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
9. EN1 ENSGALG00000042389 3051 2.431 - - 0.870 0.744 0.817 - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
10. TNNI1 ENSGALG00000000313 4069 2.393 0.757 - 0.880 - - - - - 0.756 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
11. C1QTNF3 ENSGALG00000027887 8646 2.338 - - 0.819 0.779 0.740 - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
12. MYOZ2 ENSGALG00000011991 714 2.3 0.836 - 0.757 - 0.707 - - - - - myozenin 2 [Source:NCBI gene;Acc:422682]
13. MYH15 ENSGALG00000015358 6304 2.282 - - - 0.719 0.797 - - - 0.766 - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
14. ACBD7 ENSGALG00000019663 2328 1.726 - - 0.820 - - - 0.906 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
15. RGMA ENSGALG00000039173 12874 1.621 - - 0.797 0.824 - - - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
16. COL9A2 ENSGALG00000027526 4685 1.609 - - 0.713 - - 0.896 - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
17. EMILIN3 ENSGALG00000030012 6200 1.593 - - 0.704 - - 0.889 - - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
18. MYBPC1 ENSGALG00000012783 317 1.592 - - 0.848 - 0.744 - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
19. MYF5 ENSGALG00000028091 1965 1.585 - - 0.780 - - - 0.805 - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
20. MYL3 ENSGALG00000005448 3379 1.582 0.723 - 0.859 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
21. TRIM55 ENSGALG00000041327 1097 1.554 0.735 - 0.819 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
22. ENSGALG00000010113 ENSGALG00000010113 508 1.551 - - 0.814 0.737 - - - - - -
23. KLHL31 ENSGALG00000016309 1518 1.547 0.767 - 0.780 - - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
24. SS2 ENSGALG00000003034 277 1.541 - - 0.789 - - 0.752 - - - - somatostatin II [Source:NCBI gene;Acc:395106]
25. PKD2L2 ENSGALG00000006120 592 1.532 - - 0.756 - 0.776 - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
26. GGMOXR1 GGMOXR1 6734 1.521 - - 0.733 - 0.788 - - - - -
27. SOX9 ENSGALG00000004386 14802 1.52 - - 0.754 0.766 - - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
28. ENSGALG00000009407 ENSGALG00000009407 148 1.501 - - - 0.735 - - - 0.766 - -
29. LOC771069 ENSGALG00000023936 4093 1.486 - - 0.748 - 0.738 - - - - - C-factor-like, transcript variant X2
30. HSPB2 ENSGALG00000040842 197 1.479 0.730 - - - - - - - 0.749 - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
31. TNNC1 ENSGALG00000001459 7110 1.47 0.726 - - - 0.744 - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
32. PAX-9 PAX-9 491 1.453 - - - 0.724 0.729 - - - - -
33. RBM24 ENSGALG00000012712 4138 1.442 0.731 - 0.711 - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
34. NEXN ENSGALG00000008945 1504 1.419 - - 0.708 0.711 - - - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
35. HOXA10 ENSGALG00000026631 1 0.914 - - - - - 0.914 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
36. KCNG1 ENSGALG00000007980 26 0.914 - - - - - 0.914 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
37. ENSGALG00000008822 ENSGALG00000008822 221 0.914 - - - - - 0.914 - - - -
38. SCARA3 ENSGALG00000026651 2559 0.914 - - - - - 0.914 - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
39. APOD ENSGALG00000006995 2 0.914 - - - - - 0.914 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
40. OCA2 ENSGALG00000016740 421 0.91 - - - - - 0.910 - - - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
41. SAMD3 ENSGALG00000032409 459 0.908 - - - - - 0.908 - - - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
42. LEFTY2 ENSGALG00000009256 1 0.906 - - - - - 0.906 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
43. PTH3R PTH3R 214 0.906 - - - - - 0.906 - - - -
44. COL8A1 ENSGALG00000015253 2505 0.903 - - - - - 0.903 - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
45. RRAD ENSGALG00000005140 183 0.902 - - - - - 0.902 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
46. T ENSGALG00000011489 2619 0.901 - - - - - 0.901 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
47. SPON2 ENSGALG00000038433 1240 0.901 - - - - - 0.901 - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
48. CCK ENSGALG00000029788 213 0.895 - - - - - 0.895 - - - - cholecystokinin [Source:NCBI gene;Acc:414884]
49. ZNF385B ENSGALG00000009012 290 0.89 - - - - - 0.890 - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
50. COL9A1 ENSGALG00000015970 3788 0.888 - - - - - 0.888 - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
51. SLC15A5 ENSGALG00000013097 213 0.885 - - - - - 0.885 - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
52. RAB38 ENSGALG00000028018 1046 0.884 - - - - - 0.884 - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
53. ZNF362 ENSGALG00000026558 11 0.881 - - - - - - - 0.881 - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
54. TIMP3 ENSGALG00000028627 8706 0.879 - - - - - 0.879 - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
55. LRRTM1 ENSGALG00000015967 85 0.878 - - - - - 0.878 - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
56. LOC112532477 ENSGALG00000027520 40 0.877 - - - - - - 0.877 - - - fibrinogen-like protein 1-like protein
57. SCARA5 ENSGALG00000016580 712 0.875 - - - - - 0.875 - - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
58. TAC1 ENSGALG00000009737 2211 0.873 - - - - - 0.873 - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
59. NPY7R ENSGALG00000021303 215 0.871 - - - - - 0.871 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
60. C8orf34 ENSGALG00000034561 286 0.87 - - - - - - 0.870 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
61. LOC419074 ENSGALG00000017336 1885 0.864 - - - - - - 0.864 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
62. B3GNT7 ENSGALG00000007701 929 0.86 - - - - - 0.860 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
63. WIF1 ENSGALG00000039209 863 0.859 - - - - - 0.859 - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
64. IQCH ENSGALG00000007909 128 0.858 - - - - - - 0.858 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
65. PCDH17 ENSGALG00000016941 1006 0.858 - - - - - 0.858 - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
66. TFB1M ENSGALG00000013647 84 0.858 - - - - - - 0.858 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
67. EIF2AK2 ENSGALG00000010560 749 0.858 - - - - - - 0.858 - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
68. LYRM1 ENSGALG00000002273 1523 0.852 - - - - - - 0.852 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
69. CAT-1 CAT-1 115 0.851 - - - - - - 0.851 - - -
70. AMN ENSGALG00000011391 143 0.849 - - - - - - - 0.849 - - amnion associated transmembrane protein [Source:NCBI gene;Acc:423472]
71. C9H2ORF82 ENSGALG00000040264 4201 0.848 - - - - - 0.848 - - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
72. MB ENSGALG00000012541 260 0.846 - - - - - - - 0.846 - - myoglobin [Source:NCBI gene;Acc:418056]
73. CCL17 ENSGALG00000024466 10 0.845 - - - - - 0.845 - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
74. ACAN ENSGALG00000006725 184 0.845 - - - - - 0.845 - - - - aggrecan [Source:NCBI gene;Acc:395798]
75. HN1L HN1L 247 0.844 - - - - - - 0.844 - - -
76. PLK4 ENSGALG00000010195 514 0.843 - - - - - - 0.843 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
77. SMAD3 ENSGALG00000035701 161 0.84 - - - - - - 0.840 - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
78. TITIN TITIN 589 0.838 - - - 0.838 - - - - - -
79. TMEM255B ENSGALG00000035839 46 0.837 - - - - - - - 0.837 - - transmembrane protein 255B [Source:HGNC Symbol;Acc:HGNC:28297]
80. COL9A3 ENSGALG00000005628 2842 0.833 - - - - - 0.833 - - - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
81. KIAA1244 KIAA1244 62 0.832 - - - - - - 0.832 - - -
82. GGT7 ENSGALG00000001062 476 0.831 - - - - - - 0.831 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
83. FAM46C 13 0.83 - - - - - - 0.830 - - - family with sequence similarity 46 member C
84. BRN3 BRN3 52 0.83 - - - - - - - 0.830 - -
85. CHST9 ENSGALG00000019489 21 0.83 - - - - - - 0.830 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
86. CBLN1 ENSGALG00000042664 15 0.83 - - - - - - 0.830 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
87. MAP3K19 ENSGALG00000028457 17 0.83 - - - - - - 0.830 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
88. PANX1 ENSGALG00000039751 70 0.83 - - - - - - 0.830 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
89. MBL2 ENSGALG00000002507 17 0.83 - - - - - - 0.830 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
90. AMPD1 ENSGALG00000002082 228 0.828 - - 0.828 - - - - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
91. FAM69A ENSGALG00000005918 157 0.828 - - - - - - 0.828 - - - family with sequence similarity 69 member A, transcript variant X4
92. RNF170 ENSGALG00000015386 296 0.827 - - - - - - 0.827 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
93. TAP1 ENSGALG00000035075 54 0.826 - - - - - - 0.826 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
94. BRT-1 BRT-1 26083 0.825 - - - - 0.825 - - - - -
95. CHRDL1 ENSGALG00000008072 711 0.825 - - - - - 0.825 - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
96. ADAM5P ENSGALG00000009606 31 0.825 - - - - - - - 0.825 - - ADAM metallopeptidase domain 5, pseudogene, transcript variant X5
97. PTPN21 ENSGALG00000010616 129 0.824 - - - - - - 0.824 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
98. FOXRED1 ENSGALG00000046347 4176 0.824 - - - - - - 0.824 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
99. NPTX2 ENSGALG00000003562 249 0.823 - - - - - - 0.823 - - - neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
100. ARHGAP12 ENSGALG00000007254 479 0.823 - - - - - - 0.823 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]

There are 261 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA