Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MYF5

Gene Name Gene ID Reads Annotation
MYF5 ENSGALG00000028091 1965 myogenic factor 5 [Source:NCBI gene;Acc:395633]











Genes with expression patterns similar to MYF5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MYF5 ENSGALG00000028091 1965 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 myogenic factor 5 [Source:NCBI gene;Acc:395633]
2. TNNI1 ENSGALG00000000313 4069 2.52 - 0.885 0.842 - - 0.793 - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
3. TNNC2 ENSGALG00000006835 2963 2.508 - 0.922 0.800 - - - - - 0.786 - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
4. ACTC1 ENSGALG00000009844 20914 2.455 - 0.842 0.876 - - 0.737 - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
5. MYF6 ENSGALG00000010936 1143 2.38 - 0.766 0.783 - - 0.831 - - - - myogenic factor 6 [Source:NCBI gene;Acc:417873]
6. C1QTNF3 ENSGALG00000027887 8646 2.33 - - 0.858 - 0.738 0.734 - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
7. TRIM55 ENSGALG00000041327 1097 2.273 - 0.718 0.822 - - 0.733 - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
8. TNNT3 ENSGALG00000006572 1652 1.646 - 0.840 0.806 - - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
9. ACBD7 ENSGALG00000019663 2328 1.626 - - 0.769 - - - 0.857 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
10. MYOD1 ENSGALG00000006216 568 1.616 - - 0.744 - - 0.872 - - - - myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
11. MYL1 ENSGALG00000002907 1300 1.585 - - 0.780 - - - 0.805 - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
12. RGMA ENSGALG00000039173 12874 1.576 - - 0.726 - - 0.850 - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
13. MYL2_1 ENSGALG00000004582 2367 1.555 - 0.779 0.776 - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
14. CYP1B1 ENSGALG00000025822 3143 1.536 - - 0.742 - - - - - - 0.794 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
15. ACTN2 ENSGALG00000014463 1724 1.52 - - 0.738 - - - - - 0.782 - actinin alpha 2 [Source:NCBI gene;Acc:396263]
16. MYOG ENSGALG00000000172 460 1.519 - - 0.771 - - 0.748 - - - - myogenin [Source:NCBI gene;Acc:374004]
17. RBM24 ENSGALG00000012712 4138 1.494 - - 0.781 - - 0.713 - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
18. SH3BGR ENSGALG00000016127 2561 1.483 - - 0.741 - - 0.742 - - - - SH3 domain binding glutamate rich protein
19. MYH1D ENSGALG00000027323 365 1.483 - - 0.768 - - - - - 0.715 - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
20. FST ENSGALG00000014908 3182 1.476 - - 0.715 - - 0.761 - - - - follistatin [Source:NCBI gene;Acc:396119]
21. HPCAL1 ENSGALG00000016443 6633 1.475 - - 0.758 - - 0.717 - - - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
22. EN1 ENSGALG00000042389 3051 1.47 - - 0.744 - - 0.726 - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
23. P4HA3 ENSGALG00000042030 826 1.454 - 0.709 - - - - - - - 0.745 prolyl 4-hydroxylase subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:30135]
24. TNFIP6 TNFIP6 3024 1.448 - 0.740 - - - - - - 0.708 -
25. NTN3 ENSGALG00000029072 1368 1.416 - - - - - 0.709 0.707 - - - netrin 1 [Source:NCBI gene;Acc:396387]
26. TCF15 ENSGALG00000026276 3646 0.913 - - 0.913 - - - - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
27. ZFYVE16 ENSGALG00000015576 287 0.873 - - - - - - 0.873 - - - zinc finger FYVE-type containing 16, transcript variant X3
28. CAT-1 CAT-1 115 0.872 - - - - - - 0.872 - - -
29. PLK4 ENSGALG00000010195 514 0.868 - - - - - - 0.868 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
30. LOC419074 ENSGALG00000017336 1885 0.866 - - - - - - 0.866 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
31. HSPB8 ENSGALG00000007383 5333 0.866 - - 0.866 - - - - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
32. RNF170 ENSGALG00000015386 296 0.864 - - - - - - 0.864 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
33. TTC38 ENSGALG00000014551 1135 0.864 - - - - - - 0.864 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
34. WDR35 157 0.858 - - - - - - 0.858 - - - WD repeat domain 35, transcript variant X1
35. ELAVL2 ENSGALG00000015799 585 0.857 - - - - - - 0.857 - - - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
36. ENSGALG00000027002 ENSGALG00000027002 7570 0.855 - - - - - 0.855 - - - -
37. ZNF488 ENSGALG00000005975 82 0.853 - - - - - 0.853 - - - - zinc finger protein 488, transcript variant X2
38. KIAA1244 KIAA1244 62 0.853 - - - - - - 0.853 - - -
39. EFCAB7 ENSGALG00000010998 13 0.852 - - - - - - 0.852 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
40. CHST9 ENSGALG00000019489 21 0.851 - - - - - - 0.851 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
41. FAM46C 13 0.851 - - - - - - 0.851 - - - family with sequence similarity 46 member C
42. ADAP2 ENSGALG00000003319 134 0.851 - - - - - - 0.851 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
43. MAP3K19 ENSGALG00000028457 17 0.851 - - - - - - 0.851 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
44. CBLN1 ENSGALG00000042664 15 0.851 - - - - - - 0.851 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
45. MBL2 ENSGALG00000002507 17 0.851 - - - - - - 0.851 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
46. EIF2AK2 ENSGALG00000010560 749 0.849 - - - - - - 0.849 - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
47. LYRM1 ENSGALG00000002273 1523 0.848 - - - - - - 0.848 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
48. PANX1 ENSGALG00000039751 70 0.848 - - - - - - 0.848 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
49. FHIT ENSGALG00000007172 580 0.848 - - - - - 0.848 - - - - fragile histidine triad [Source:NCBI gene;Acc:416071]
50. OGG1 ENSGALG00000006651 1320 0.847 - - - - - - 0.847 - - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
51. LOC769139 ENSGALG00000026754 753 0.846 - - - - - - 0.846 - - - feather keratin 1-like, transcript variant X2
52. VWDE ENSGALG00000042443 160 0.846 - - - - - - 0.846 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
53. PTPN21 ENSGALG00000010616 129 0.845 - - - - - - 0.845 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
54. GGT7 ENSGALG00000001062 476 0.845 - - - - - - 0.845 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
55. HN1L HN1L 247 0.845 - - - - - - 0.845 - - -
56. FAM69A ENSGALG00000005918 157 0.844 - - - - - - 0.844 - - - family with sequence similarity 69 member A, transcript variant X4
57. FOXRED1 ENSGALG00000046347 4176 0.844 - - - - - - 0.844 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
58. WSCD1 ENSGALG00000005886 539 0.843 - - - - - - 0.843 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
59. GRID1 ENSGALG00000037366 159 0.841 - - - - - - 0.841 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
60. LGI2 ENSGALG00000043283 433 0.841 - - - - - - 0.841 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
61. ARHGAP12 ENSGALG00000007254 479 0.841 - - - - - - 0.841 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
62. CXADR ENSGALG00000015701 96 0.841 - - - - - - 0.841 - - - coxsackie virus and adenovirus receptor, transcript variant X2
63. AFG3L2 ENSGALG00000013853 1138 0.84 - - - - - - 0.840 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
64. AAGAB ENSGALG00000007887 142 0.839 - - - - - - 0.839 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
65. SCTR ENSGALG00000012106 49 0.837 - - - - - - 0.837 - - - secretin receptor [Source:NCBI gene;Acc:770943]
66. TMEM108 ENSGALG00000036412 2903 0.834 - - - - - 0.834 - - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
67. SYT8 ENSGALG00000006602 369 0.833 - - - - - - 0.833 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
68. SLC16A14 ENSGALG00000002897 157 0.833 - - - - - - 0.833 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
69. ENSGALG00000023314 ENSGALG00000023314 6331 0.831 - - - - - - 0.831 - - -
70. gga-mir-7474 ENSGALG00000033766 5727 0.83 - - 0.830 - - - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
71. PAX-7 PAX-7 3856 0.829 - - 0.829 - - - - - - -
72. CCDC173 358 0.828 - - - - - - 0.828 - - - coiled-coil domain containing 173
73. MTOR ENSGALG00000003339 328 0.827 - - - - - - 0.827 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
74. LOC112532477 ENSGALG00000027520 40 0.827 - - - - - - 0.827 - - - fibrinogen-like protein 1-like protein
75. KCNK2 ENSGALG00000009687 1552 0.823 - - - - - - 0.823 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
76. AADAT ENSGALG00000009655 1692 0.823 - - - - - - 0.823 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
77. NGFR ENSGALG00000035950 13452 0.822 - - 0.822 - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
78. SMOC1 ENSGALG00000009415 2403 0.82 - - 0.820 - - - - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
79. KLHL31 ENSGALG00000016309 1518 0.82 - - 0.820 - - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
80. TMEM65 ENSGALG00000037371 776 0.819 - - - - - - 0.819 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
81. SOX9 ENSGALG00000004386 14802 0.818 - - - - - - - - 0.818 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
82. RAB22A ENSGALG00000007554 201 0.816 - - - - - - 0.816 - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
83. ASH1L ENSGALG00000014638 803 0.814 - - - - - - 0.814 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
84. SLC2A9 ENSGALG00000014971 751 0.814 - - - - - - 0.814 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
85. TMEM47 ENSGALG00000027198 3619 0.813 - - 0.813 - - - - - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
86. TNFRSF1A ENSGALG00000039461 1569 0.812 - - - - - - 0.812 - - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
87. NCOA5 ENSGALG00000007009 299 0.812 - - - - - - 0.812 - - - nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:HGNC:15909]
88. TAP1 ENSGALG00000035075 54 0.811 - - - - - - 0.811 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
89. IQCH ENSGALG00000007909 128 0.81 - - - - - - 0.810 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
90. TFB1M ENSGALG00000013647 84 0.81 - - - - - - 0.810 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
91. USP42 ENSGALG00000003378 1392 0.809 - - - - - - 0.809 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
92. ZNF618 ENSGALG00000008886 1326 0.807 - - - - - - 0.807 - - - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
93. METAP1 ENSGALG00000012239 1125 0.806 - - - - - - 0.806 - - - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
94. ECEL1 ENSGALG00000030420 670 0.806 - - - - - - 0.806 - - - endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
95. THRSPB 39 0.805 - - - - - 0.805 - - - - thyroid hormone responsive spot 14 beta
96. SORCS1 ENSGALG00000008465 468 0.804 - - - - - - 0.804 - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
97. TP73 ENSGALG00000001006 335 0.804 - - - - - - 0.804 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
98. GGMOXR1 GGMOXR1 6734 0.803 - - 0.803 - - - - - - -
99. PPP2R3A ENSGALG00000034512 1091 0.803 - - - - - - 0.803 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
100. SLCO3A1 ENSGALG00000006871 1125 0.801 - - - - - - 0.801 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]

There are 132 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA