Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MTRF1

Gene Name Gene ID Reads Annotation
MTRF1 ENSGALG00000016951 3983 mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]











Genes with expression patterns similar to MTRF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MTRF1 ENSGALG00000016951 3983 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
2. DDHD1 ENSGALG00000012426 6068 1.739 - - - - - - 0.753 0.986 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
3. PACSIN3 ENSGALG00000008231 5423 1.731 - - - - - - 0.756 0.975 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
4. KXD1 ENSGALG00000036736 3771 1.689 - - - - - - 0.744 0.945 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
5. IGF2BP2 ENSGALG00000033195 11421 1.676 - - - - - - 0.740 0.936 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
6. MTCH2 ENSGALG00000036196 15097 1.54 - - - - - - 0.701 0.839 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
7. TTYH2 ENSGALG00000026940 15628 1.528 - - - - - - 0.728 0.800 - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
8. SPCS3 ENSGALG00000010839 19106 1.47 - - - - - - 0.741 0.729 - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
9. PTPN11 ENSGALG00000004821 2658 0.992 - - - - - - - 0.992 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
10. RBM6 ENSGALG00000035578 1690 0.992 - - - - - - - 0.992 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
11. VPS13B 2293 0.991 - - - - - - - 0.991 - - vacuolar protein sorting 13 homolog B
12. H2AFY_1 ENSGALG00000040141 4895 0.991 - - - - - - - 0.991 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
13. NAA50 ENSGALG00000033889 3551 0.991 - - - - - - - 0.991 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
14. SNCAIP ENSGALG00000005330 2425 0.99 - - - - - - - 0.990 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
15. EED ENSGALG00000014060 6467 0.99 - - - - - - - 0.990 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
16. ADARB1 ENSGALG00000007527 2480 0.99 - - - - - - - 0.990 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
17. CMC1 ENSGALG00000025811 3939 0.99 - - - - - - - 0.990 - - C-X9-C motif containing 1
18. FGFRL1 ENSGALG00000037525 1687 0.99 - - - - - - - 0.990 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
19. PGS1 ENSGALG00000007181 3187 0.99 - - - - - - - 0.990 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
20. PPT1 ENSGALG00000003936 2540 0.989 - - - - - - - 0.989 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
21. MB21D1 2460 0.989 - - - - - - - 0.989 - - Mab-21 domain containing 1
22. ENSGALG00000026930 ENSGALG00000026930 681 0.989 - - - - - - - 0.989 - -
23. FBXW8 ENSGALG00000008207 1639 0.989 - - - - - - - 0.989 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
24. TMEM100 ENSGALG00000026465 1785 0.989 - - - - - - - 0.989 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
25. DENND5B 4077 0.989 - - - - - - - 0.989 - - DENN domain containing 5B, transcript variant X1
26. TECPR2 ENSGALG00000011373 1063 0.989 - - - - - - - 0.989 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
27. gga-mir-1787 ENSGALG00000025542 1373 0.989 - - - - - - - 0.989 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
28. EPS15 ENSGALG00000010543 1598 0.989 - - - - - - - 0.989 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
29. KNOP1 ENSGALG00000002042 6251 0.988 - - - - - - - 0.988 - - lysine-rich nucleolar protein 1, transcript variant X1
30. RPAP1 ENSGALG00000008624 3522 0.988 - - - - - - - 0.988 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
31. ADD1 ENSGALG00000015664 6828 0.988 - - - - - - - 0.988 - - adducin 1 [Source:NCBI gene;Acc:422882]
32. KIAA1432 KIAA1432 1792 0.988 - - - - - - - 0.988 - -
33. ACAP2 ENSGALG00000007040 4182 0.988 - - - - - - - 0.988 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
34. ANKRD17 ENSGALG00000011642 3192 0.988 - - - - - - - 0.988 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
35. KCTD9 ENSGALG00000000275 3455 0.987 - - - - - - - 0.987 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
36. ZMYM4 ENSGALG00000002499 435 0.987 - - - - - - - 0.987 - - zinc finger MYM-type containing 4, transcript variant X1
37. PAX-6 PAX-6 2650 0.987 - - - - - - - 0.987 - -
38. DOCK8 481 0.987 - - - - - - - 0.987 - - dedicator of cytokinesis 8, transcript variant X1
39. NFASC ENSGALG00000031776 4264 0.987 - - - - - - - 0.987 - - neurofascin [Source:NCBI gene;Acc:419824]
40. LIN7C ENSGALG00000012170 5043 0.986 - - - - - - - 0.986 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
41. KDM4B ENSGALG00000034592 6711 0.986 - - - - - - - 0.986 - - lysine demethylase 4B, transcript variant X8
42. PRORSD1P ENSGALG00000034854 2924 0.985 - - - - - - - 0.985 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
43. MAK16 ENSGALG00000001663 7455 0.985 - - - - - - - 0.985 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
44. FAS ENSGALG00000006351 461 0.984 - - - - - - - 0.984 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
45. RIOK1 ENSGALG00000012795 4658 0.984 - - - - - - - 0.984 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
46. VRK1 ENSGALG00000011116 4524 0.983 - - - - - - - 0.983 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
47. RHOT1 ENSGALG00000003397 5149 0.981 - - - - - - - 0.981 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
48. QARS ENSGALG00000029980 4207 0.978 - - - - - - - 0.978 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
49. C3H2ORF43 C3H2ORF43 5628 0.978 - - - - - - - 0.978 - -
50. OMA1 ENSGALG00000010861 3328 0.978 - - - - - - - 0.978 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
51. MED10 ENSGALG00000028336 9343 0.973 - - - - - - - 0.973 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
52. LMNB2 ENSGALG00000000470 4364 0.966 - - - - - - - 0.966 - - lamin B2 [Source:NCBI gene;Acc:396222]
53. SNAPC5 ENSGALG00000007695 4117 0.964 - - - - - - - 0.964 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
54. FAM192A ENSGALG00000021473 10213 0.964 - - - - - - - 0.964 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
55. LGALS1 ENSGALG00000012420 13993 0.961 - - - - - - - 0.961 - - galectin 1 [Source:NCBI gene;Acc:396491]
56. ATP8B1 ENSGALG00000030834 521 0.96 - - - - - - - 0.960 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
57. CHN1 ENSGALG00000009293 6415 0.96 - - - - - - - 0.960 - - chimerin 1 [Source:NCBI gene;Acc:429021]
58. RNF10 ENSGALG00000036417 8027 0.96 - - - - - - - 0.960 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
59. UFD1L 12964 0.959 - - - - - - - 0.959 - - ubiquitin fusion degradation 1 like (yeast)
60. ACADSB ENSGALG00000041417 7710 0.959 - - - - - - - 0.959 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
61. HDHD2 ENSGALG00000034801 6373 0.959 - - - - - - - 0.959 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
62. FKBP15 ENSGALG00000008838 3677 0.957 - - - - - - - 0.957 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
63. MRPL48 ENSGALG00000017319 9773 0.954 - - - - - - - 0.954 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
64. RAB6A ENSGALG00000017320 10569 0.95 - - - - - - - 0.950 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
65. NFI1 NFI1 6210 0.948 - - - - - - - 0.948 - -
66. IPO9 ENSGALG00000000397 9263 0.941 - - - - - - - 0.941 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
67. ERLIN1 ENSGALG00000003308 6427 0.941 - - - - - - - 0.941 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
68. APIP ENSGALG00000031286 6838 0.94 - - - - - - - 0.940 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
69. RBP5 ENSGALG00000014662 31268 0.932 - - - - - - - 0.932 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
70. WBP11 ENSGALG00000011745 11182 0.931 - - - - - - - 0.931 - - WW domain binding protein 11, transcript variant X1
71. STT3B ENSGALG00000011465 11939 0.926 - - - - - - - 0.926 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
72. VAPB ENSGALG00000007549 15511 0.919 - - - - - - - 0.919 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
73. TPRG1L ENSGALG00000001024 9809 0.908 - - - - - - - 0.908 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
74. TSSC4 ENSGALG00000006530 10413 0.908 - - - - - - - 0.908 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
75. ZNF276 ENSGALG00000000513 2410 0.893 - - - - - - - 0.893 - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
76. SLC25A20 ENSGALG00000028227 7685 0.89 - - - - - - - 0.890 - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
77. LOC407092 ENSGALG00000013809 10706 0.872 - - - - - - - 0.872 - - AD012Z, transcript variant X5
78. LOC422426 ENSGALG00000009622 1470 0.87 - - - - - - - 0.870 - - uncharacterized LOC422426, transcript variant X2
79. WASL ENSGALG00000008797 5729 0.87 - - - - - - - 0.870 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
80. RBBP6 ENSGALG00000006043 9708 0.858 - - - - - - - 0.858 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
81. TFAM ENSGALG00000002703 19330 0.855 - - - - - - - 0.855 - - transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
82. SACS ENSGALG00000017120 4906 0.844 - - - - - - 0.844 - - - sacsin molecular chaperone [Source:HGNC Symbol;Acc:HGNC:10519]
83. TOP3B ENSGALG00000030051 5953 0.843 - - - - - - - 0.843 - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
84. ITGB5 ENSGALG00000029766 5978 0.837 - - - - - - - 0.837 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
85. GATD3A ENSGALG00000016918 24760 0.834 - - - - - - - 0.834 - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
86. MESDC1 1013 0.833 - - - - - - - 0.833 - - mesoderm development candidate 1
87. CMPK CMPK 9569 0.83 - - - - - - 0.830 - - -
88. DENR ENSGALG00000003795 30805 0.83 - - - - - - - 0.830 - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
89. CPSF2 ENSGALG00000010783 5236 0.828 - - - - - - - 0.828 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
90. TTC37 ENSGALG00000014670 5715 0.825 - - - - - - 0.825 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
91. TMEM18 ENSGALG00000028744 11779 0.823 - - - - - - - 0.823 - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
92. SDHD ENSGALG00000007878 25129 0.823 - - - - - - 0.823 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
93. LAPTM4A ENSGALG00000016479 15973 0.819 - - - - - - 0.819 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
94. ACTN1 ENSGALG00000042458 10477 0.818 - - - - - - 0.818 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
95. TAX1BP1 ENSGALG00000042822 7728 0.817 - - - - - - - 0.817 - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
96. CRMP1B CRMP1B 18633 0.814 - - - - - - - 0.814 - -
97. MFAP3 ENSGALG00000004040 6951 0.813 - - - - - - - 0.813 - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
98. NRSN1 ENSGALG00000037811 11424 0.812 - - - - - - - 0.812 - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
99. DCAF7 ENSGALG00000000510 8681 0.812 - - - - - - 0.812 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
100. RIPK1 ENSGALG00000012827 3405 0.812 - - - - - - 0.812 - - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]

There are 272 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA