Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MTHFD2

Gene Name Gene ID Reads Annotation
MTHFD2 ENSGALG00000034344 6570 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:NCBI gene;Acc:426126]











Genes with expression patterns similar to MTHFD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MTHFD2 ENSGALG00000034344 6570 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:NCBI gene;Acc:426126]
2. NSUN2 ENSGALG00000013064 2005 0.83 - - - - - - 0.830 - - - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
3. AP4B1 ENSGALG00000035295 2008 0.793 - - - - - - 0.793 - - - adaptor related protein complex 4 beta 1 subunit [Source:NCBI gene;Acc:419879]
4. N6AMT1 ENSGALG00000015802 5221 0.788 - - - - - - - 0.788 - - N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:NCBI gene;Acc:418481]
5. IGBP1 ENSGALG00000044628 9200 0.787 - - - - - - 0.787 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
6. DCPS ENSGALG00000031143 10191 0.784 - - - - - - 0.784 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
7. RAB33B ENSGALG00000009790 2340 0.764 - - - - - - 0.764 - - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
8. GALNS GALNS 2317 0.759 - - - - - - - 0.759 - -
9. FKBP7 ENSGALG00000009149 6742 0.758 - - - - - - 0.758 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
10. PSMG1 ENSGALG00000016062 7511 0.755 - - - - - - 0.755 - - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
11. CLPX ENSGALG00000007289 6348 0.754 - - - - - - 0.754 - - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
12. NUDT4 ENSGALG00000011285 2998 0.753 - - - - - - 0.753 - - - nudix hydrolase 4, transcript variant X5
13. RIOK2 ENSGALG00000015288 6280 0.748 - - - - - - 0.748 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
14. TRAF7 ENSGALG00000005767 4615 0.748 - - - - - - 0.748 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
15. PPAPDC1B PPAPDC1B 6698 0.747 - - - - - - - 0.747 - -
16. CREM ENSGALG00000007082 1991 0.747 - - - - - - 0.747 - - - cAMP responsive element modulator [Source:NCBI gene;Acc:378903]
17. METTL21A ENSGALG00000008493 3188 0.745 - - - - - - 0.745 - - - methyltransferase like 21A [Source:NCBI gene;Acc:424094]
18. ACSL3 ENSGALG00000005206 1763 0.744 - - - - - - - 0.744 - - acyl-CoA synthetase long chain family member 3 [Source:HGNC Symbol;Acc:HGNC:3570]
19. TBCD ENSGALG00000001503 7880 0.743 - - - - - - 0.743 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
20. gga-mir-6587 ENSGALG00000026386 9441 0.739 - - - - - - 0.739 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
21. NRBP1 ENSGALG00000016512 4725 0.736 - - - - - - 0.736 - - - nuclear receptor binding protein 1 [Source:NCBI gene;Acc:421985]
22. PTP4A1 ENSGALG00000016271 23953 0.734 - - - - - - - - - 0.734 protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
23. UBXN2B ENSGALG00000030585 2177 0.733 - - - - - - 0.733 - - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
24. RB1CC1 ENSGALG00000015259 4211 0.732 - - - - - - 0.732 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
25. FYTTD1 ENSGALG00000007581 9341 0.732 - - - - - - 0.732 - - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
26. ZNF277 ENSGALG00000009454 7407 0.729 - - - - - - 0.729 - - - zinc finger protein 277 [Source:NCBI gene;Acc:427859]
27. FARP1 ENSGALG00000016886 13132 0.728 - - - - - - 0.728 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
28. ASUN ASUN 17129 0.728 - - - - - - 0.728 - - -
29. TMEM68 ENSGALG00000031835 1691 0.727 - - - - - - - 0.727 - - transmembrane protein 68 [Source:NCBI gene;Acc:421124]
30. RFC1 ENSGALG00000014298 6516 0.727 - - - - - - - 0.727 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
31. AHSA1 ENSGALG00000010463 15252 0.726 - - - - - - 0.726 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
32. MGAT4B ENSGALG00000005924 2663 0.726 - - - - - - 0.726 - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
33. ENSGALG00000009771 ENSGALG00000009771 10273 0.726 - - - - - - 0.726 - - -
34. CDC42BPB ENSGALG00000011432 8220 0.725 - - - - - - 0.725 - - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
35. LMAN1 ENSGALG00000034821 12788 0.724 - - - - - - 0.724 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
36. STRN3 ENSGALG00000040464 9045 0.723 - - - - - - - 0.723 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
37. RDH10 ENSGALG00000034346 15285 0.722 - - - - - - 0.722 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
38. CHRAC1 ENSGALG00000040823 5695 0.722 - - - - - - - 0.722 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
39. RELL1 ENSGALG00000014336 2950 0.722 - - - - - - 0.722 - - - RELT like 1 [Source:NCBI gene;Acc:422795]
40. RBM7 ENSGALG00000007017 8779 0.721 - - - - - - 0.721 - - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
41. COX17 ENSGALG00000014981 5646 0.72 - - - - - - 0.720 - - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
42. TTC4 10377 0.72 - - - - - - 0.720 - - - tetratricopeptide repeat domain 4
43. HMGB3 ENSGALG00000009071 12011 0.72 - - - - - - 0.720 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
44. DERL1 ENSGALG00000033950 15074 0.719 - - - - - - 0.719 - - - derlin 1 [Source:NCBI gene;Acc:420350]
45. INTS2 ENSGALG00000005269 6966 0.719 - - - - - - 0.719 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
46. STRA6 ENSGALG00000001449 8248 0.719 - - - - - - 0.719 - - - stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
47. MRPL48 ENSGALG00000017319 9773 0.717 - - - - - - 0.717 - - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
48. UMPS ENSGALG00000011770 11331 0.716 - - - - - - 0.716 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
49. RNF111 ENSGALG00000004171 2696 0.716 - - - - - - - 0.716 - - ring finger protein 111 [Source:NCBI gene;Acc:374021]
50. RNF20 ENSGALG00000015548 7199 0.715 - - - - - - - 0.715 - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
51. RPAIN ENSGALG00000001666 2676 0.714 - - - - - 0.714 - - - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
52. GLE1 ENSGALG00000004738 6483 0.714 - - - - - - - 0.714 - - GLE1, RNA export mediator [Source:HGNC Symbol;Acc:HGNC:4315]
53. CHDH ENSGALG00000005363 910 0.713 - - - - - - 0.713 - - - choline dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24288]
54. EXOSC3 ENSGALG00000002426 7255 0.711 - - - - - - 0.711 - - - exosome component 3 [Source:NCBI gene;Acc:423626]
55. PROM1 ENSGALG00000014496 2494 0.711 - - - - - - 0.711 - - - prominin 1 [Source:NCBI gene;Acc:422825]
56. C6ORF162 C6ORF162 4217 0.711 - - - - - - 0.711 - - -
57. KXD1 ENSGALG00000036736 3771 0.71 - - - - - - 0.710 - - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
58. RNF8 ENSGALG00000023256 5495 0.709 - - - - - 0.709 - - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
59. ENSGALG00000028422 ENSGALG00000028422 1504 0.709 - - - - - - 0.709 - - -
60. LIMD1 ENSGALG00000035623 7282 0.709 - - - - - - 0.709 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
61. DNAL4 ENSGALG00000043451 4469 0.709 - - - - - - - 0.709 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
62. USP30 ENSGALG00000040265 2000 0.708 - - - - - - 0.708 - - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
63. TANC1 ENSGALG00000012570 4196 0.708 - - - - - - - 0.708 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
64. GGA.1330 GGA.1330 11281 0.707 - - - - - - 0.707 - - -
65. MBNL3 ENSGALG00000032045 10980 0.707 - - - - - - 0.707 - - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
66. C5orf28 C5orf28 6585 0.707 - - - - - - 0.707 - - -
67. ERLIN2 ENSGALG00000003092 18251 0.707 - - - - - - - 0.707 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
68. ANAPC7 ENSGALG00000003826 5484 0.707 - - - - - - - 0.707 - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
69. USP16 ENSGALG00000015813 6803 0.706 - - - - - - 0.706 - - - ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
70. CCDC59 ENSGALG00000028648 9272 0.706 - - - - - - 0.706 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
71. SEC22A ENSGALG00000011697 7981 0.706 - - - - - - 0.706 - - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
72. JUP ENSGALG00000017414 6920 0.706 - - - - - - - - 0.706 - junction plakoglobin [Source:NCBI gene;Acc:429710]
73. EHD3 ENSGALG00000009086 14407 0.706 - - - - - - 0.706 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
74. SWIP-1 SWIP-1 6024 0.705 - - - - - - 0.705 - - -
75. ITGB1 ENSGALG00000007145 19551 0.705 - - - - - - 0.705 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
76. CIB1 ENSGALG00000008302 13946 0.704 - - - - - - 0.704 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
77. FAM18B1 ENSGALG00000001335 5177 0.704 - - - - - - - 0.704 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
78. HCCS ENSGALG00000005571 4939 0.703 - - - - - - 0.703 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
79. CHM ENSGALG00000006906 4953 0.703 - - - - - - 0.703 - - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
80. ENSGALG00000007514 ENSGALG00000007514 4866 0.703 - - - - - - 0.703 - - -
81. CSE1L ENSGALG00000004707 20653 0.701 - - - - - - 0.701 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
82. PANX2 ENSGALG00000000003 2185 0.701 - - - - - - - 0.701 - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
83. UBXN4 ENSGALG00000012259 2922 0.7 - - - - - 0.700 - - - - UBX domain protein 4 [Source:HGNC Symbol;Acc:HGNC:14860]
84. ALAS1 3660 0.7 - - - - - - 0.700 - - - 5'-aminolevulinate synthase 1, transcript variant X1
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA