Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MTHFD1

Gene Name Gene ID Reads Annotation
MTHFD1 ENSGALG00000011797 11001 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]











Genes with expression patterns similar to MTHFD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MTHFD1 ENSGALG00000011797 11001 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
2. UCH-L1 UCH-L1 12697 1.667 - - - - - - 0.802 0.865 - -
3. LZTFL1 ENSGALG00000033928 3493 1.635 - - - - - - 0.726 0.909 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
4. RAE1 ENSGALG00000007653 8930 1.589 - - - - - - 0.715 0.874 - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
5. IDI1 ENSGALG00000006723 7761 1.429 - - - 0.719 - - 0.710 - - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
6. ORC5 ENSGALG00000008175 3426 0.989 - - - - - - - 0.989 - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
7. CDC45 ENSGALG00000001616 8432 0.971 - - - - - - - 0.971 - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
8. BIRC5 ENSGALG00000008713 46856 0.923 - - - - - - - 0.923 - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
9. HADH ENSGALG00000016124 18216 0.916 - - - - - - - 0.916 - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
10. PKIB ENSGALG00000027036 1663 0.913 - - - - - - - 0.913 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
11. SLC2A10 ENSGALG00000004498 421 0.913 - - - - - - - 0.913 - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
12. KCNE3 ENSGALG00000022696 561 0.913 - - - - - - - 0.913 - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
13. PPP2R3C ENSGALG00000010052 637 0.913 - - - - - - - 0.913 - - protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
14. KCTD10 ENSGALG00000005138 1191 0.913 - - - - - - - 0.913 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
15. KIAA1598 KIAA1598 989 0.912 - - - - - - - 0.912 - -
16. PPP1R21 ENSGALG00000008937 2343 0.912 - - - - - - - 0.912 - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
17. PDCD2 ENSGALG00000011169 3594 0.912 - - - - - - - 0.912 - - programmed cell death 2 [Source:NCBI gene;Acc:421550]
18. SLC35E1 ENSGALG00000003794 2563 0.912 - - - - - - - 0.912 - - solute carrier family 35 member E1 [Source:HGNC Symbol;Acc:HGNC:20803]
19. PLA2R1 ENSGALG00000011149 1964 0.912 - - - - - - - 0.912 - - phospholipase A2 receptor 1 [Source:NCBI gene;Acc:404304]
20. KIAA1324L ENSGALG00000030324 1695 0.912 - - - - - - - 0.912 - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
21. EXOC4 ENSGALG00000008477 4684 0.912 - - - - - - - 0.912 - - exocyst complex component 4 [Source:NCBI gene;Acc:416700]
22. SLC25A15 ENSGALG00000017032 6773 0.911 - - - - - - - 0.911 - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
23. FBN2 ENSGALG00000014686 4538 0.91 - - - - - - - 0.910 - - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
24. ACAD8 ENSGALG00000001557 2562 0.91 - - - - - - - 0.910 - - acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
25. PRKRIP1 ENSGALG00000001833 5092 0.91 - - - - - - - 0.910 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
26. CDCA9 ENSGALG00000021225 2244 0.909 - - - - - - - 0.909 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
27. SPTAN1 ENSGALG00000004719 20251 0.908 - - - - - - - 0.908 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
28. DGKD ENSGALG00000001730 4456 0.908 - - - - - - - 0.908 - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
29. TCTN3 ENSGALG00000010517 3985 0.908 - - - - - - - 0.908 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
30. ITGA1 ENSGALG00000014891 11378 0.908 - - - - - - - 0.908 - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
31. TLK2 ENSGALG00000000410 4690 0.908 - - - - - - - 0.908 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
32. KDELR3 ENSGALG00000032313 4376 0.908 - - - - - - - 0.908 - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
33. KBTBD2 ENSGALG00000038704 2821 0.908 - - - - - - - 0.908 - - kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]
34. URB1 ENSGALG00000015887 5854 0.908 - - - - - - - 0.908 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
35. COX20 ENSGALG00000027440 5881 0.907 - - - - - - - 0.907 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
36. VIMENTIN VIMENTIN 33105 0.906 - - - - - - - 0.906 - -
37. PUM1 ENSGALG00000042598 9392 0.904 - - - - - - - 0.904 - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
38. AMOTL2 5217 0.901 - - - - - - - 0.901 - - angiomotin like 2, transcript variant X3
39. CHMP1A ENSGALG00000006161 4195 0.899 - - - - - - - 0.899 - - charged multivesicular body protein 1A [Source:NCBI gene;Acc:415841]
40. SSR3 ENSGALG00000028683 24334 0.899 - - - - - - - 0.899 - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
41. ARL4A ENSGALG00000027757 4285 0.898 - - - - - - - 0.898 - - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
42. MYO1B ENSGALG00000007712 8755 0.897 - - - - - - - 0.897 - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
43. VATB VATB 13756 0.896 - - - - - - - 0.896 - -
44. CPSF6 ENSGALG00000019355 7634 0.886 - - - - - - - 0.886 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
45. CYTL1 ENSGALG00000015015 4438 0.885 - - - - - - - 0.885 - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
46. ENSGALG00000004132 ENSGALG00000004132 9287 0.884 - - - - - - - 0.884 - -
47. KLF10 ENSGALG00000037913 3529 0.882 - - - - - - - 0.882 - - Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]
48. AATF ENSGALG00000005420 6501 0.881 - - - - - - - 0.881 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
49. GPATCH2 ENSGALG00000009627 4061 0.876 - - - - - - - 0.876 - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
50. IGF2BP1 ENSGALG00000041204 6420 0.874 - - - - - - - 0.874 - - insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
51. MRPS18A ENSGALG00000010296 11039 0.873 - - - - - - - 0.873 - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
52. STRN ENSGALG00000010580 7561 0.87 - - - - - - - 0.870 - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
53. MZT1 ENSGALG00000016932 9269 0.87 - - - - - - - 0.870 - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
54. HIBCH ENSGALG00000043307 11990 0.855 - - - - - - - 0.855 - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
55. FEN1 ENSGALG00000033781 16551 0.853 - - - - - - 0.853 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
56. INPP5E ENSGALG00000001964 3580 0.847 - - - - - - - 0.847 - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
57. CANX ENSGALG00000032148 11297 0.843 - - - - - - 0.843 - - - calnexin [Source:NCBI gene;Acc:416288]
58. FAM110A ENSGALG00000046425 5558 0.84 - - - - - - - 0.840 - - family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
59. CYB5A ENSGALG00000013708 8287 0.838 - - - - - - - 0.838 - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
60. LYAR ENSGALG00000015000 10756 0.831 - - - - - - 0.831 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
61. HAUS1 ENSGALG00000040397 6195 0.83 - - - - - - 0.830 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
62. PPIC ENSGALG00000005346 5002 0.828 - - - - - - - 0.828 - - peptidylprolyl isomerase C [Source:HGNC Symbol;Acc:HGNC:9256]
63. DNAJC1 ENSGALG00000007914 8028 0.827 - - - - - - - 0.827 - - DnaJ heat shock protein family (Hsp40) member C1 [Source:HGNC Symbol;Acc:HGNC:20090]
64. TRIM33 ENSGALG00000001976 7404 0.826 - - - - - - 0.826 - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
65. VPS36 ENSGALG00000017026 3658 0.824 - - - - - - 0.824 - - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
66. ARHGAP19 ENSGALG00000007609 3655 0.823 - - - - - - 0.823 - - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
67. PIGA ENSGALG00000016559 5010 0.821 - - - - - - - 0.821 - - phosphatidylinositol glycan anchor biosynthesis class A [Source:NCBI gene;Acc:418624]
68. IGDCC4 ENSGALG00000007410 5457 0.82 - - - - - - 0.820 - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
69. VPS35 ENSGALG00000004375 8059 0.819 - - - - - - - 0.819 - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
70. CACYBP ENSGALG00000004554 7320 0.818 - - - - - - 0.818 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
71. EIF3I ENSGALG00000003337 28832 0.816 - - - - - - 0.816 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
72. PMPCB ENSGALG00000008280 6357 0.815 - - - - - - 0.815 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
73. RAB3IP ENSGALG00000009959 1652 0.814 - - - - - - 0.814 - - - RAB3A interacting protein, transcript variant X1
74. MTX2 ENSGALG00000009264 17304 0.811 - - - - - - - 0.811 - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
75. TMEM30A ENSGALG00000015904 8533 0.811 - - - - - - - 0.811 - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
76. PDZD11 ENSGALG00000004198 11484 0.81 - - - - - - 0.810 - - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
77. RBM7 ENSGALG00000007017 8779 0.809 - - - - - - - - 0.809 - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
78. CSTF3 ENSGALG00000011685 4711 0.809 - - - - - - 0.809 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
79. COPS2 ENSGALG00000000404 8980 0.806 - - - - - - 0.806 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
80. TRAPPC4 ENSGALG00000007707 3568 0.805 - - - - - - 0.805 - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
81. UPF3B ENSGALG00000008618 12350 0.805 - - - - - - 0.805 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
82. GGCT ENSGALG00000030552 3446 0.805 - - - - - - 0.805 - - - gamma-glutamylcyclotransferase
83. HELLS ENSGALG00000005451 7094 0.804 - - - - - - 0.804 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
84. HSF2 ENSGALG00000038420 5259 0.803 - - - - - - 0.803 - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
85. PAM16 9684 0.803 - - - - - - 0.803 - - - presequence translocase associated motor 16 homolog, transcript variant X2
86. CDC73 ENSGALG00000002469 4586 0.803 - - - - - - 0.803 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
87. VDAC3 ENSGALG00000041463 21595 0.802 - - - - - - - 0.802 - - voltage dependent anion channel 3, transcript variant X9
88. IK ENSGALG00000037172 12100 0.801 - - - - - - 0.801 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
89. NAA35 ENSGALG00000012598 6409 0.801 - - - - - - 0.801 - - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:NCBI gene;Acc:427461]
90. TACC3 ENSGALG00000015709 17336 0.8 - - - - - - - 0.800 - - transforming acidic coiled-coil containing protein 3 [Source:NCBI gene;Acc:422899]
91. LONP1 ENSGALG00000040492 7133 0.798 - - - - - - 0.798 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
92. OAT ENSGALG00000031158 10249 0.797 - - - - - - 0.797 - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
93. ORC4 ENSGALG00000012448 8405 0.797 - - - - - - 0.797 - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
94. SNRNP48 ENSGALG00000013005 1468 0.796 - - - - - - 0.796 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
95. TBL1X ENSGALG00000040006 28597 0.794 - - - - - - - 0.794 - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
96. NECAP1 ENSGALG00000037656 5181 0.794 - - - - - - 0.794 - - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
97. CHCHD1 ENSGALG00000028809 9955 0.792 - - - - - - 0.792 - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
98. CYFIP1 ENSGALG00000016736 6701 0.792 - - - - - - 0.792 - - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
99. VPS26A ENSGALG00000004174 9198 0.79 - - - - - - 0.790 - - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
100. LSM10 ENSGALG00000002127 2519 0.79 - - - - - - 0.790 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]

There are 202 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA