Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MTDH

Gene Name Gene ID Reads Annotation
MTDH ENSGALG00000034050 9525 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]











Genes with expression patterns similar to MTDH

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MTDH ENSGALG00000034050 9525 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
2. USP8 ENSGALG00000005894 4499 3.054 0.726 - - - - - 0.734 0.728 - 0.866 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
3. SUN1 ENSGALG00000003781 3442 1.787 - - - - - - 0.869 - - 0.918 Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
4. SQLE ENSGALG00000036915 4172 1.713 - - - - - - 0.847 - - 0.866 squalene epoxidase [Source:NCBI gene;Acc:420335]
5. ITSN1 ENSGALG00000036677 5727 1.68 0.778 - - - - - 0.902 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
6. HELLS ENSGALG00000005451 7094 1.68 - - - - - - 0.836 - - 0.844 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
7. RAB1A ENSGALG00000031582 6929 1.653 0.802 - - - - - 0.851 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
8. HISTH1 ENSGALG00000011747 16825 1.644 0.787 - - - - - 0.857 - - - histone H1
9. NAP1L1 ENSGALG00000010238 14506 1.641 0.879 - - - - - 0.762 - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
10. UFD1L 12964 1.603 - - - - - - 0.798 - - 0.805 ubiquitin fusion degradation 1 like (yeast)
11. ASB6 ENSGALG00000004378 1080 1.599 - - - - - - 0.858 0.741 - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
12. SURF6 ENSGALG00000038413 11178 1.583 0.813 - - - - - 0.770 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
13. TPR ENSGALG00000005105 2924 1.582 0.776 - - - - - 0.806 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
14. RNF20 ENSGALG00000015548 7199 1.58 0.726 - - - - - 0.854 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
15. WDSUB1 ENSGALG00000012574 2038 1.576 - - - - - - 0.811 0.765 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
16. Sep-09 Sep-09 4723 1.57 - - - - - - 0.796 0.774 - -
17. UBE2E1 ENSGALG00000011286 5483 1.568 - - - - - - 0.817 0.751 - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
18. DNPEP ENSGALG00000011318 10623 1.545 - - - - - - 0.835 0.710 - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
19. ARPC1A ENSGALG00000004693 11583 1.529 - - - - - - 0.712 - - 0.817 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
20. SUV39H2 ENSGALG00000013920 4360 1.529 - - - - - - 0.809 - - 0.720 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
21. LFNG ENSGALG00000038515 5178 1.528 - - - - - - 0.801 - - 0.727 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
22. HIPK3 ENSGALG00000011695 6842 1.519 - - - - - - 0.721 - - 0.798 homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
23. PRPF40A ENSGALG00000012526 7724 1.507 0.724 - - - - - 0.783 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
24. TAF8 ENSGALG00000003498 2071 1.484 - - - - - - 0.759 0.725 - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
25. NDUFV3 ENSGALG00000022813 4456 1.45 - - - - - - 0.746 0.704 - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
26. SPERT ENSGALG00000016981 145 0.94 - - - - - - - - - 0.940 spermatid associated [Source:NCBI gene;Acc:418848]
27. SH3BP2 ENSGALG00000015665 431 0.936 - - - - - - - - - 0.936 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
28. ARID1B ENSGALG00000013683 3397 0.921 - - - - - - - - - 0.921 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
29. KLC1 ENSGALG00000011528 1621 0.92 - - - - - - - - - 0.920 kinesin light chain 1, transcript variant X6
30. TRAPPC12 ENSGALG00000016387 2593 0.915 - - - - - - - - - 0.915 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
31. BMI1 ENSGALG00000041267 6618 0.912 - - - - - - 0.912 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
32. CUL5 ENSGALG00000017165 2480 0.911 - - - - - - - - - 0.911 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
33. MED16 ENSGALG00000001978 2387 0.902 - - - - - - 0.902 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
34. ANKRD46 ENSGALG00000041445 3791 0.902 - - - - - - - - - 0.902 ankyrin repeat domain 46, transcript variant X1
35. PARL ENSGALG00000002315 15943 0.899 - - - - - - 0.899 - - - presenilin associated rhomboid like
36. CMSS1 ENSGALG00000015267 2954 0.897 - - - - - - 0.897 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
37. CDC42SE2 ENSGALG00000027258 4725 0.892 - - - - - - 0.892 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
38. NEK4 ENSGALG00000041428 4473 0.891 - - - - - - 0.891 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
39. MOB3A ENSGALG00000031729 9690 0.887 - - - - - - - - - 0.887 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
40. PAPD7 ENSGALG00000013061 2031 0.887 - - - - - - 0.887 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
41. U3 U3 1604 0.887 - - - - - - - - - 0.887
42. SRP72 ENSGALG00000011403 13666 0.884 - - - - - - 0.884 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
43. CCNI ENSGALG00000011457 3203 0.884 - - - - - - - - - 0.884 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
44. ENSGALG00000002852 ENSGALG00000002852 2687 0.884 - - - - - - 0.884 - - -
45. SPG11 ENSGALG00000008180 1890 0.884 - - - - - - 0.884 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
46. C5H15ORF29 C5H15ORF29 3709 0.883 - - - - - - 0.883 - - -
47. TMEM135 2283 0.882 - - - - - - 0.882 - - - transmembrane protein 135, transcript variant X4
48. CD2AP ENSGALG00000016720 8852 0.882 - - - - - - - - - 0.882 Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
49. COQ7 ENSGALG00000006861 5118 0.881 - - - - - - 0.881 - - - coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
50. CDC73 ENSGALG00000002469 4586 0.881 - - - - - - 0.881 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
51. JARID2 ENSGALG00000012702 4280 0.88 - - - - - - 0.880 - - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
52. KIDINS220 ENSGALG00000016409 854 0.88 - - - - - - - - - 0.880 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
53. PDHX ENSGALG00000033753 2799 0.878 - - - - - - 0.878 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
54. LMO7 ENSGALG00000016920 3809 0.876 - - - - - - - - - 0.876 LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
55. TCF25 ENSGALG00000000129 7587 0.874 - - - - - - - - - 0.874 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
56. TM2D3 ENSGALG00000026271 2566 0.874 - - - - - - 0.874 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
57. FTSJ2 FTSJ2 2951 0.874 - - - - - - 0.874 - - -
58. USMG5 ENSGALG00000034645 33263 0.873 - - - - - - - - - 0.873 up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
59. CANX ENSGALG00000032148 11297 0.872 - - - - - - 0.872 - - - calnexin [Source:NCBI gene;Acc:416288]
60. SPATA20 ENSGALG00000006857 3506 0.872 - - - - - - - - - 0.872 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
61. CLDND1 ENSGALG00000039538 5048 0.871 - - - - - - 0.871 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
62. EIF3I ENSGALG00000003337 28832 0.871 - - - - - - 0.871 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
63. DPYSL3 ENSGALG00000007582 7743 0.87 - - - - - - 0.870 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
64. GGA.8379 GGA.8379 4419 0.87 - - - - - - 0.870 - - -
65. CCDC66 ENSGALG00000005450 1262 0.869 - - - - - - - - - 0.869 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
66. PKN3 532 0.868 - - - - - - 0.868 - - - protein kinase N3, transcript variant X2
67. WIPI1 ENSGALG00000004215 3359 0.866 - - - - - - 0.866 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
68. NIN ENSGALG00000012361 2284 0.866 - - - - - - 0.866 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
69. HTATSF1 ENSGALG00000006410 3526 0.866 - - - - - - 0.866 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
70. MBTPS1 ENSGALG00000003293 4843 0.866 - - - - - - 0.866 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
71. NUP205 ENSGALG00000011662 4157 0.865 - - - - - - 0.865 - - - nucleoporin 205
72. DIEXF ENSGALG00000009887 4782 0.864 - - - - - - 0.864 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
73. LPAR1 ENSGALG00000015729 3874 0.864 - - - - - - 0.864 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
74. MRPL10 ENSGALG00000014387 12386 0.864 - - - - - - 0.864 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
75. MYO5A ENSGALG00000031987 2469 0.863 - - - - - - - - - 0.863 myosin VA [Source:NCBI gene;Acc:396237]
76. URM1 ENSGALG00000004971 17880 0.862 - - - - - - 0.862 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
77. IK ENSGALG00000037172 12100 0.861 - - - - - - 0.861 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
78. EIF2D ENSGALG00000000856 8348 0.86 - - - - - - 0.860 - - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
79. VWA9 ENSGALG00000007491 4790 0.86 - - - - - - - - - 0.860 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
80. ERMP1 ENSGALG00000000438 1136 0.858 - - - - - - 0.858 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
81. IFT74 ENSGALG00000001801 1932 0.857 - - - - - - 0.857 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
82. CCDC101 CCDC101 9111 0.856 - - - - - - 0.856 - - -
83. DNAJC12 ENSGALG00000002769 1418 0.856 - - - - - - 0.856 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
84. USP54 ENSGALG00000005232 2749 0.856 - - - - - - 0.856 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
85. SCAF4 ENSGALG00000033965 2027 0.855 - - - - - - 0.855 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
86. PIF1 ENSGALG00000009032 2342 0.853 - - - - - - 0.853 - - - PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]
87. C9orf89 C9orf89 3056 0.853 - - - - - - - - - 0.853
88. COPS2 ENSGALG00000000404 8980 0.852 - - - - - - 0.852 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
89. GAS6 ENSGALG00000016820 481 0.852 - - - - - - 0.852 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
90. PEX16 ENSGALG00000008421 3684 0.851 - - - - - - 0.851 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
91. LYAR ENSGALG00000015000 10756 0.851 - - - - - - 0.851 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
92. ENSGALG00000028164 ENSGALG00000028164 3325 0.851 - - - - - - 0.851 - - -
93. KIAA2026 ENSGALG00000015050 4659 0.851 - - - - - - 0.851 - - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
94. ZFR ENSGALG00000003235 8466 0.85 - - - - - - 0.850 - - - zinc finger RNA binding protein, transcript variant X3
95. ETV4 ENSGALG00000036678 2424 0.85 - - - - - - 0.850 - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
96. COIL ENSGALG00000003158 7806 0.85 - - - - - - 0.850 - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
97. ABHD17A ENSGALG00000041163 5578 0.85 - - - - - - 0.850 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
98. CHOCT-1 CHOCT-1 3422 0.849 - - - - - - 0.849 - - -
99. COPS8 ENSGALG00000033385 10166 0.849 - - - - - - 0.849 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
100. VPS29 ENSGALG00000004529 22509 0.847 - - - - - - 0.847 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]

There are 476 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA