Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSRB1

Gene Name Gene ID Reads Annotation
MSRB1 ENSGALG00000005414 4197 methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]











Genes with expression patterns similar to MSRB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MSRB1 ENSGALG00000005414 4197 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
2. LDHA ENSGALG00000006300 4796 1.759 - - - - - - 0.802 0.957 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
3. TOR1A ENSGALG00000004165 4487 1.635 - - - - - - 0.788 0.847 - - torsin family 1 member A [Source:NCBI gene;Acc:417190]
4. RANBP10 ENSGALG00000001439 4003 1.588 - - - - - - 0.739 0.849 - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
5. RBBP8 ENSGALG00000014982 3255 1.464 - - - - - - 0.729 0.735 - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
6. FOCAD ENSGALG00000015071 3677 1.411 - - 0.709 - - - 0.702 - - - focadhesin [Source:NCBI gene;Acc:427233]
7. PLD1 ENSGALG00000009252 2331 0.961 - - - - - - - 0.961 - - phospholipase D1, transcript variant X5
8. MAPKKK3L ENSGALG00000005884 1011 0.951 - - - - - - - 0.951 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
9. GJB6 ENSGALG00000017136 500 0.944 - - - - - - - 0.944 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
10. PAMR1 ENSGALG00000007886 928 0.942 - - - - - - - 0.942 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
11. ISCA2 ENSGALG00000020417 1130 0.94 - - - - - - - 0.940 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
12. CGT CGT 948 0.935 - - - - - - - 0.935 - -
13. ENSGALG00000001854 ENSGALG00000001854 965 0.932 - - - - - - - 0.932 - -
14. EDA ENSGALG00000035966 602 0.931 - - - - - - - 0.931 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
15. MRC1 ENSGALG00000008629 259 0.93 - - - - - - - 0.930 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
16. C4BPA ENSGALG00000001175 4278 0.93 - - - - - - - 0.930 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
17. CCDC51 ENSGALG00000006465 1845 0.929 - - - - - - - 0.929 - - coiled-coil domain containing 51, transcript variant X1
18. UBA7 ENSGALG00000036263 2918 0.928 - - - - - - - 0.928 - - ubiquitin-like modifier activating enzyme 7
19. CHKA ENSGALG00000036754 5077 0.928 - - - - - - - 0.928 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
20. CENPC1 CENPC1 3324 0.928 - - - - - - - 0.928 - -
21. SLC41A1 ENSGALG00000000721 1604 0.926 - - - - - - - 0.926 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
22. B3GNT7 ENSGALG00000007701 929 0.926 - - - - - - - 0.926 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
23. PYGL ENSGALG00000012365 4691 0.926 - - - - - - - 0.926 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
24. ECI2 ENSGALG00000012809 3692 0.926 - - - - - - - 0.926 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
25. KIAA0930 ENSGALG00000014226 1243 0.926 - - - - - - - 0.926 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
26. ABCB10 ENSGALG00000011096 1407 0.924 - - - - - - - 0.924 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
27. CASP7 ENSGALG00000008933 506 0.923 - - - - - - - 0.923 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
28. TRIM62 ENSGALG00000028437 5124 0.922 - - - - - - - 0.922 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
29. HDAC4 ENSGALG00000004288 2124 0.922 - - - - - - - 0.922 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
30. ZBTB26 ENSGALG00000042762 1920 0.921 - - - - - - - 0.921 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
31. LOC422106 ENSGALG00000019757 453 0.921 - - - - - - - 0.921 - - uncharacterized LOC422106
32. TCEANC ENSGALG00000016581 948 0.92 - - - - - - - 0.920 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
33. COL6A1 ENSGALG00000005974 1991 0.92 - - - - - - - 0.920 - - collagen type VI alpha 1 chain [Source:NCBI gene;Acc:396000]
34. FA2H ENSGALG00000002775 396 0.92 - - - - - - - 0.920 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
35. RASGEF1A ENSGALG00000002525 918 0.919 - - - - - - - 0.919 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
36. HSDL1 ENSGALG00000003273 1108 0.919 - - - - - - - 0.919 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
37. AMER1 ENSGALG00000007599 994 0.918 - - - - - - - 0.918 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
38. FUBP1 ENSGALG00000008939 2850 0.918 - - - - - - - 0.918 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
39. ANXA6 ENSGALG00000004357 2891 0.918 - - - - - - - 0.918 - - annexin A6 [Source:NCBI gene;Acc:395481]
40. LPIN1 ENSGALG00000016456 1044 0.917 - - - - - - - 0.917 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
41. II II 929 0.916 - - - - - - - 0.916 - -
42. OLFML2A ENSGALG00000001048 1329 0.916 - - - - - - - 0.916 - - olfactomedin like 2A [Source:HGNC Symbol;Acc:HGNC:27270]
43. GADD45 GADD45 8780 0.915 - - - - - - - 0.915 - -
44. TES ENSGALG00000031934 5908 0.915 - - - - - - - 0.915 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
45. DSG2 ENSGALG00000015142 67 0.915 - - - - - - - 0.915 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
46. TRMT61B ENSGALG00000008979 615 0.914 - - - - - - - 0.914 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
47. GPX7 ENSGALG00000010633 7224 0.914 - - - - - - - 0.914 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
48. SEMA3E ENSGALG00000038225 677 0.913 - - - - - - - 0.913 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
49. TFG ENSGALG00000015299 849 0.913 - - - - - - - 0.913 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
50. SALL1 ENSGALG00000039238 3740 0.912 - - - - - - - 0.912 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
51. MDM4 ENSGALG00000000636 91 0.912 - - - - - - - 0.912 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
52. ORAI1 ENSGALG00000004240 515 0.912 - - - - - - - 0.912 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
53. EX-FABP EX-FABP 516 0.912 - - - - - - - 0.912 - -
54. PHLPP2 ENSGALG00000000875 561 0.911 - - - - - - - 0.911 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
55. ZYX ENSGALG00000014688 8686 0.911 - - - - - - - 0.911 - - zyxin [Source:NCBI gene;Acc:418300]
56. SLC30A2 ENSGALG00000010375 44 0.911 - - - - - - - 0.911 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
57. DGUOK ENSGALG00000005961 5929 0.911 - - - - - - - 0.911 - - deoxyguanosine kinase [Source:NCBI gene;Acc:770922]
58. NRG4 ENSGALG00000002952 1440 0.911 - - - - - - - 0.911 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
59. LAMP2 ENSGALG00000008572 198 0.91 - - - - - - - 0.910 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
60. NIT1 ENSGALG00000007585 1256 0.91 - - - - - - - 0.910 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
61. WBSCR27 3511 0.91 - - - - - - - 0.910 - - Williams Beuren syndrome chromosome region 27
62. YARS2 503 0.909 - - - - - - - 0.909 - - tyrosyl-tRNA synthetase 2
63. CWH43 ENSGALG00000041921 68 0.909 - - - - - - - 0.909 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
64. TMEM200A ENSGALG00000002282 77 0.909 - - - - - - - 0.909 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
65. VPS37A ENSGALG00000013646 55 0.909 - - - - - - - 0.909 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
66. GAA ENSGALG00000038853 158 0.909 - - - - - - - 0.909 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
67. TM2D3 ENSGALG00000026271 2566 0.909 - - - - - - - 0.909 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
68. CLUH ENSGALG00000005854 2100 0.908 - - - - - - - 0.908 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
69. PRPSAP1 ENSGALG00000021539 3517 0.908 - - - - - - - 0.908 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
70. SATB1 ENSGALG00000011254 1377 0.908 - - - - - - - 0.908 - - SATB homeobox 1 [Source:NCBI gene;Acc:420647]
71. SENP5 ENSGALG00000008545 909 0.907 - - - - - - - 0.907 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
72. TMEM214 ENSGALG00000022850 7943 0.907 - - - - - - - 0.907 - - transmembrane protein 214 [Source:HGNC Symbol;Acc:HGNC:25983]
73. ENSGALG00000004032 ENSGALG00000004032 2010 0.907 - - - - - - - 0.907 - -
74. RIN3 ENSGALG00000010806 729 0.906 - - - - - - - 0.906 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
75. LRRC45 ENSGALG00000002877 1751 0.906 - - - - - - - 0.906 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
76. CHUK ENSGALG00000003289 5698 0.906 - - - - - - - 0.906 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
77. TBX3 ENSGALG00000036043 2888 0.904 - - - - - - - 0.904 - - T-box 3 [Source:NCBI gene;Acc:374202]
78. ENSGALG00000006569 ENSGALG00000006569 2169 0.904 - - - - - - - 0.904 - -
79. LRAT ENSGALG00000009276 220 0.903 - - - - - - - 0.903 - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
80. LIPG ENSGALG00000043734 2490 0.902 - - - - - - - 0.902 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
81. ENSGALG00000016572 ENSGALG00000016572 79 0.901 - - - - - - - 0.901 - -
82. HSPA13 ENSGALG00000019201 712 0.901 - - - - - - - 0.901 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
83. DBR1 ENSGALG00000043797 1896 0.9 - - - - - - - 0.900 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
84. SLC25A48 ENSGALG00000006341 2606 0.9 - - - - - - - 0.900 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
85. DNAJC11 ENSGALG00000000627 769 0.899 - - - - - - - 0.899 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
86. SOX5 ENSGALG00000032768 998 0.898 - - - - - - - 0.898 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
87. ARAP2 ENSGALG00000041373 233 0.897 - - - - - - - 0.897 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
88. DEDD ENSGALG00000043129 3422 0.896 - - - - - - - 0.896 - - death effector domain containing [Source:HGNC Symbol;Acc:HGNC:2755]
89. GSTA GSTA 3130 0.896 - - - - - - - 0.896 - -
90. TOX ENSGALG00000039102 1434 0.896 - - - - - - - 0.896 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
91. IKZF5 ENSGALG00000032289 993 0.895 - - - - - - - 0.895 - - IKAROS family zinc finger 5 [Source:NCBI gene;Acc:430882]
92. TRIM71 ENSGALG00000019622 1633 0.895 - - - - - - - 0.895 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
93. STK17B ENSGALG00000007924 519 0.894 - - - - - - - 0.894 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
94. S100A10 ENSGALG00000028774 8695 0.894 - - - - - - - 0.894 - - S100 calcium binding protein A10 [Source:NCBI gene;Acc:396506]
95. H4-I H4-I 2327 0.89 - - - - - - - 0.890 - -
96. SEC11C ENSGALG00000031663 4266 0.89 - - - - - - - 0.890 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
97. ANKRD40L ENSGALG00000026189 887 0.887 - - - - - - - 0.887 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
98. KANK1 ENSGALG00000010158 3780 0.887 - - - - - - - 0.887 - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
99. PCCB ENSGALG00000037238 1536 0.885 - - - - - - - 0.885 - - propionyl-CoA carboxylase subunit beta [Source:HGNC Symbol;Acc:HGNC:8654]
100. NAT ENSGALG00000005472 662 0.884 - - - - - - - 0.884 - - N-acetyltransferase, liver isozyme [Source:NCBI gene;Acc:396537]

There are 247 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA