Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSRA

Gene Name Gene ID Reads Annotation
MSRA ENSGALG00000028032 2607 methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]











Genes with expression patterns similar to MSRA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MSRA ENSGALG00000028032 2607 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
2. ATL2 ENSGALG00000037289 7926 2.17 - - - - - - 0.724 0.704 0.742 - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
3. SOD2 ENSGALG00000011661 13178 1.82 - - 0.886 - - - 0.934 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
4. SCRN1 ENSGALG00000011176 3783 1.782 - - 0.827 - - - 0.955 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
5. ZOV3 ZOV3 3267 1.773 - - 0.895 - - - - - 0.878 -
6. METTL11A METTL11A 11876 1.747 - - 0.775 - - - 0.972 - - -
7. BTAF1 ENSGALG00000030598 3556 1.726 - - 0.797 - - - 0.929 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
8. PI4K2A ENSGALG00000006143 1863 1.706 - - 0.908 - - - - - 0.798 - phosphatidylinositol 4-kinase type 2 alpha
9. MPG ENSGALG00000028691 1874 1.706 - - 0.924 - - - - 0.782 - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
10. KIF15 ENSGALG00000036645 9946 1.695 - - 0.782 - - - 0.913 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
11. SLC25A14 ENSGALG00000004063 5574 1.695 - - 0.751 - - - 0.944 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
12. MRE11A MRE11A 5754 1.694 - - 0.750 - - - 0.944 - - -
13. SDF4 ENSGALG00000001872 6382 1.678 - - - - - - 0.945 0.733 - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
14. PTDSS1 ENSGALG00000030185 5515 1.658 - - 0.856 - - - 0.802 - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
15. LARS2 ENSGALG00000036309 2624 1.627 - - 0.905 - - - - 0.722 - - leucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17095]
16. COX7A2L ENSGALG00000037996 13646 1.601 - - 0.726 - - - 0.875 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
17. GNS ENSGALG00000009856 3045 1.6 - - 0.869 - - - - 0.731 - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
18. TMEM14A ENSGALG00000019894 5279 1.571 - - 0.855 - - - - 0.716 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
19. CROT ENSGALG00000008813 8052 1.567 - - 0.866 - - - - 0.701 - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
20. CEP70 ENSGALG00000012087 7992 1.567 - - 0.730 - - - - 0.837 - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
21. STRN3 ENSGALG00000040464 9045 1.552 - - 0.844 - - - - 0.708 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
22. PANX2 ENSGALG00000000003 2185 1.541 - - - - - - 0.750 0.791 - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
23. UBE2V1 ENSGALG00000008015 17947 1.532 - - 0.769 - - - - - 0.763 - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
24. NFS1 ENSGALG00000001568 7113 1.522 - - 0.800 - - - 0.722 - - - NFS1, cysteine desulfurase [Source:NCBI gene;Acc:419133]
25. RB1CC1 ENSGALG00000015259 4211 1.5 - - 0.765 - - - - 0.735 - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
26. PHF14 ENSGALG00000038041 13687 1.48 - - - - - - 0.739 0.741 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
27. FUNDC1 ENSGALG00000028187 10511 1.465 - - - - - - 0.764 - 0.701 - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
28. NDUFS5 ENSGALG00000003625 27698 1.457 - - 0.750 - - - - 0.707 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
29. N6AMT1 ENSGALG00000015802 5221 1.409 - - 0.707 - - - - 0.702 - - N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:NCBI gene;Acc:418481]
30. ABCD3 ENSGALG00000005647 4844 0.985 - - - - - - 0.985 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
31. IMPACT ENSGALG00000015093 1334 0.985 - - - - - - 0.985 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
32. MED6 ENSGALG00000029743 9414 0.984 - - - - - - 0.984 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
33. AKAP7 ENSGALG00000029794 3287 0.984 - - - - - - 0.984 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
34. LEPROTL1 ENSGALG00000024482 4251 0.983 - - - - - - 0.983 - - - leptin receptor overlapping transcript-like 1
35. IRAK2 ENSGALG00000008407 5934 0.981 - - - - - - 0.981 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
36. DISP1 3281 0.981 - - - - - - 0.981 - - - dispatched RND transporter family member 1, transcript variant X3
37. AP2B1 ENSGALG00000042125 13229 0.981 - - - - - - 0.981 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
38. NPHP3 ENSGALG00000034586 1465 0.981 - - - - - - 0.981 - - - nephrocystin 3, transcript variant X1
39. ENSGALG00000002923 ENSGALG00000002923 2233 0.981 - - - - - - 0.981 - - -
40. RBBP6 ENSGALG00000006043 9708 0.98 - - - - - - 0.980 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
41. LMNB2 ENSGALG00000000470 4364 0.98 - - - - - - 0.980 - - - lamin B2 [Source:NCBI gene;Acc:396222]
42. SLC1A1 ENSGALG00000010187 637 0.98 - - - - - - 0.980 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
43. PNO1 ENSGALG00000009093 11153 0.98 - - - - - - 0.980 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
44. CAMKK2 ENSGALG00000040131 2795 0.979 - - - - - - 0.979 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
45. NDUFB8 ENSGALG00000005704 5781 0.979 - - - - - - 0.979 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
46. BFAR ENSGALG00000003111 1778 0.979 - - - - - - 0.979 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
47. POPDC3 ENSGALG00000027420 700 0.979 - - - - - - 0.979 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
48. gga-mir-6643 ENSGALG00000027935 4442 0.979 - - - - - - 0.979 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
49. INTS10 ENSGALG00000010130 6320 0.979 - - - - - - 0.979 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
50. UBAC1 ENSGALG00000042564 598 0.979 - - - - - - 0.979 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
51. AK6 ENSGALG00000020534 4791 0.978 - - - - - - 0.978 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
52. KLHL29 ENSGALG00000016495 582 0.978 - - - - - - 0.978 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
53. MYST2 MYST2 8078 0.978 - - - - - - 0.978 - - -
54. SDCCAG8 ENSGALG00000010713 311 0.978 - - - - - - 0.978 - - - serologically defined colon cancer antigen 8, transcript variant X5
55. GCC2 ENSGALG00000016806 1085 0.978 - - - - - - 0.978 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
56. DNAJA3 ENSGALG00000007821 3963 0.977 - - - - - - 0.977 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
57. CLCN3 ENSGALG00000009674 3704 0.977 - - - - - - 0.977 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
58. MTFMT ENSGALG00000007353 805 0.976 - - - - - - 0.976 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
59. BCAS1 ENSGALG00000007796 379 0.976 - - - - - - 0.976 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
60. HACE1 ENSGALG00000015415 1194 0.976 - - - - - - 0.976 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
61. RILPL2 ENSGALG00000003321 5632 0.975 - - - - - - 0.975 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
62. CETN2 ENSGALG00000007510 1688 0.975 - - - - - - 0.975 - - - centrin 2 [Source:NCBI gene;Acc:422303]
63. DNA2 ENSGALG00000004037 5426 0.975 - - - - - - 0.975 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
64. MAP1LC3A ENSGALG00000038721 2230 0.974 - - - - - - 0.974 - - - microtubule associated protein 1 light chain 3 alpha
65. RRN3 ENSGALG00000041989 3934 0.974 - - - - - - 0.974 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
66. SREBF2 ENSGALG00000041687 4519 0.974 - - - - - - 0.974 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
67. MOB2 ENSGALG00000030499 3658 0.974 - - - - - - 0.974 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
68. POLR3E ENSGALG00000007008 4010 0.974 - - - - - - 0.974 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
69. E2F6 ENSGALG00000016454 4747 0.973 - - - - - - 0.973 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
70. SHQ1 ENSGALG00000007798 1982 0.973 - - - - - - 0.973 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
71. H2AFY_1 ENSGALG00000040141 4895 0.97 - - - - - - 0.970 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
72. ATN1 ENSGALG00000014554 3270 0.97 - - - - - - 0.970 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
73. PPIF ENSGALG00000004809 5586 0.97 - - - - - - 0.970 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
74. ARHGAP29 ENSGALG00000005683 3622 0.97 - - - - - - 0.970 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
75. TBCCD1 ENSGALG00000006566 2696 0.97 - - - - - - 0.970 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
76. THOC2 ENSGALG00000008507 9501 0.969 - - - - - - 0.969 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
77. ENSGALG00000027854 ENSGALG00000027854 5007 0.969 - - - - - - 0.969 - - -
78. EI24 ENSGALG00000038097 24081 0.969 - - - - - - 0.969 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
79. EIF4G3 ENSGALG00000010084 5881 0.969 - - - - - - 0.969 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
80. KCTD9 ENSGALG00000000275 3455 0.968 - - - - - - 0.968 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
81. TMEM108 ENSGALG00000036412 2903 0.968 - - - - - - 0.968 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
82. LACTB2 ENSGALG00000038745 3460 0.967 - - - - - - 0.967 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
83. ATE1 ENSGALG00000009502 3751 0.967 - - - - - - 0.967 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
84. MOB1B ENSGALG00000011573 567 0.964 - - - - - - 0.964 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
85. OGFOD1 6926 0.962 - - - - - - 0.962 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
86. ARID4A ENSGALG00000012037 8554 0.96 - - - - - - 0.960 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
87. NCOA4 ENSGALG00000002066 10544 0.959 - - - - - - 0.959 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
88. YBX1 ENSGALG00000004848 20992 0.958 - - - - - - 0.958 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
89. NDUFA9 ENSGALG00000017282 14358 0.958 - - - - - - 0.958 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
90. LATS2 4776 0.957 - - - - - - 0.957 - - - large tumor suppressor kinase 2
91. PPP3R1 ENSGALG00000023648 3417 0.956 - - - - - - 0.956 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
92. RBM12B ENSGALG00000035129 4314 0.956 - - - - - - 0.956 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
93. ATP2B2 ENSGALG00000030908 584 0.954 - - 0.954 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
94. TM9SF3 ENSGALG00000005534 15290 0.954 - - - - - - 0.954 - - - transmembrane 9 superfamily member 3
95. UBA3 ENSGALG00000013410 6923 0.952 - - - - - - 0.952 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
96. RPUSD1 ENSGALG00000005315 651 0.95 - - 0.950 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
97. CHMP7 ENSGALG00000000409 8967 0.947 - - - - - - 0.947 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
98. POLA1 ENSGALG00000016312 9440 0.947 - - - - - - 0.947 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
99. ZEB2 ENSGALG00000040465 315 0.946 - - 0.946 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
100. ACOT9 ENSGALG00000016351 330 0.944 - - 0.944 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]

There are 653 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA