Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSL3

Gene Name Gene ID Reads Annotation
MSL3 ENSGALG00000041433 2957 MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]











Genes with expression patterns similar to MSL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MSL3 ENSGALG00000041433 2957 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
2. URM1 ENSGALG00000004971 17880 1.565 - - - - - - 0.836 0.729 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
3. PHACTR4 ENSGALG00000042485 3523 1.561 - - - - - - 0.806 0.755 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
4. USP54 ENSGALG00000005232 2749 0.943 - - - - - - 0.943 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
5. PDHX ENSGALG00000033753 2799 0.913 - - - - - - 0.913 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
6. RCAN3 ENSGALG00000004282 7778 0.911 - - - - - - 0.911 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
7. DIEXF ENSGALG00000009887 4782 0.91 - - - - - - 0.910 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
8. MPST ENSGALG00000040840 2122 0.908 - - - - - - 0.908 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
9. TM2D3 ENSGALG00000026271 2566 0.908 - - - - - - 0.908 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
10. TMEM135 2283 0.907 - - - - - - 0.907 - - - transmembrane protein 135, transcript variant X4
11. CCNE2 ENSGALG00000040794 1229 0.903 - - - - - - 0.903 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
12. PEX6 ENSGALG00000045514 4582 0.898 - - - - - - 0.898 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
13. NUP205 ENSGALG00000011662 4157 0.895 - - - - - - 0.895 - - - nucleoporin 205
14. TPR ENSGALG00000005105 2924 0.894 - - - - - - 0.894 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
15. DNAJC12 ENSGALG00000002769 1418 0.894 - - - - - - 0.894 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
16. ENSGALG00000002852 ENSGALG00000002852 2687 0.893 - - - - - - 0.893 - - -
17. SUN1 ENSGALG00000003781 3442 0.892 - - - - - - 0.892 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
18. RNF20 ENSGALG00000015548 7199 0.892 - - - - - - 0.892 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
19. TM9SF4 ENSGALG00000006568 567 0.892 - - - - - - 0.892 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
20. SUGP1 ENSGALG00000042132 2771 0.891 - - - - - - 0.891 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
21. TNFAIP8 ENSGALG00000027761 2383 0.891 - - - - - - 0.891 - - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
22. SCAF4 ENSGALG00000033965 2027 0.89 - - - - - - 0.890 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
23. WDR47 ENSGALG00000002129 2624 0.889 - - - - - - 0.889 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
24. NEK4 ENSGALG00000041428 4473 0.889 - - - - - - 0.889 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
25. SPG11 ENSGALG00000008180 1890 0.889 - - - - - - 0.889 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
26. PKN3 532 0.888 - - - - - - 0.888 - - - protein kinase N3, transcript variant X2
27. C14orf80 C14orf80 1921 0.888 - - - - - - 0.888 - - -
28. UBE3B ENSGALG00000013851 1672 0.887 - - - - - - 0.887 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
29. IFT74 ENSGALG00000001801 1932 0.886 - - - - - - 0.886 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
30. PGAP2 ENSGALG00000027762 2583 0.886 - - - - - - 0.886 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
31. NT5C2 ENSGALG00000008179 1760 0.885 - - - - - - 0.885 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
32. MESDC1 1013 0.884 - - - - - - 0.884 - - - mesoderm development candidate 1
33. SRPK1 ENSGALG00000037546 1849 0.884 - - - - - - 0.884 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
34. COPS8 ENSGALG00000033385 10166 0.883 - - - - - - 0.883 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
35. MBNL1 ENSGALG00000029190 3953 0.882 - - - - - - 0.882 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
36. EIF3I ENSGALG00000003337 28832 0.882 - - - - - - 0.882 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
37. ENTPD8L ENSGALG00000008936 731 0.882 - - - - - - 0.882 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
38. FAM193A ENSGALG00000015667 3075 0.881 - - - - - - 0.881 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
39. MBNL2 ENSGALG00000016890 3162 0.881 - - - - - - 0.881 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
40. GAS6 ENSGALG00000016820 481 0.881 - - - - - - 0.881 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
41. MST1 ENSGALG00000002722 994 0.881 - - - - - - 0.881 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
42. FAM57A ENSGALG00000004820 1492 0.881 - - - - - - 0.881 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
43. PLCE1 ENSGALG00000039528 151 0.881 - - - - - - 0.881 - - - phospholipase C epsilon 1
44. MBTPS1 ENSGALG00000003293 4843 0.881 - - - - - - 0.881 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
45. ERMP1 ENSGALG00000000438 1136 0.88 - - - - - - 0.880 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
46. ENSGALG00000013233 ENSGALG00000013233 3265 0.879 - - - - - - 0.879 - - -
47. RBL1 ENSGALG00000001332 2568 0.877 - - - - - - 0.877 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
48. ROR1 ENSGALG00000011019 2155 0.877 - - - - - - 0.877 - - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
49. CEP290 ENSGALG00000011177 1559 0.876 - - - - - - 0.876 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
50. FAM183A 242 0.876 - - - - - - 0.876 - - - family with sequence similarity 183 member A, transcript variant 2
51. RAB1A ENSGALG00000031582 6929 0.876 - - - - - - 0.876 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
52. COQ7 ENSGALG00000006861 5118 0.875 - - - - - - 0.875 - - - coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
53. WDSUB1 ENSGALG00000012574 2038 0.875 - - - - - - 0.875 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
54. ZFYVE19 ENSGALG00000008460 2750 0.875 - - - - - - 0.875 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
55. UPK3BL ENSGALG00000001885 1650 0.875 - - - - - - 0.875 - - - uroplakin 3B-like
56. CCNL1 ENSGALG00000009699 1033 0.875 - - - - - - 0.875 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
57. WIPI1 ENSGALG00000004215 3359 0.874 - - - - - - 0.874 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
58. NCAPG2 ENSGALG00000006525 2319 0.874 - - - - - - 0.874 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
59. SRP72 ENSGALG00000011403 13666 0.873 - - - - - - 0.873 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
60. ITSN1 ENSGALG00000036677 5727 0.873 - - - - - - 0.873 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
61. GPN3 ENSGALG00000003807 6320 0.871 - - - - - - 0.871 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
62. XPO7 ENSGALG00000001838 1875 0.87 - - - - - - 0.870 - - - exportin 7 [Source:NCBI gene;Acc:426925]
63. DNAJC16 ENSGALG00000032832 750 0.87 - - - - - - 0.870 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
64. PARL ENSGALG00000002315 15943 0.87 - - - - - - 0.870 - - - presenilin associated rhomboid like
65. HESX1 ENSGALG00000005506 203 0.87 - - - - - - 0.870 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
66. DCLK2 ENSGALG00000032386 2253 0.868 - - - - - - 0.868 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
67. KANK1 ENSGALG00000010158 3780 0.867 - - - - - - 0.867 - - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
68. TCTE1 ENSGALG00000010165 65 0.866 - - - - - - 0.866 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
69. SNORA31 SNORA31 183 0.866 - - - - - - 0.866 - - -
70. ENSGALG00000016099 ENSGALG00000016099 138 0.866 - - - - - - 0.866 - - -
71. B4GALT3 ENSGALG00000022891 2825 0.865 - - - - - - 0.865 - - - beta-1,4-galactosyltransferase 3
72. NSRP1 ENSGALG00000004186 1683 0.865 - - - - - - 0.865 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
73. MED16 ENSGALG00000001978 2387 0.864 - - - - - - 0.864 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
74. HYOU1 ENSGALG00000007659 3555 0.864 - - - - - - 0.864 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
75. ZCCHC2 ENSGALG00000012889 3163 0.863 - - - - - - 0.863 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
76. ENSGALG00000028164 ENSGALG00000028164 3325 0.863 - - - - - - 0.863 - - -
77. SCUBE1 ENSGALG00000014178 91 0.863 - - - - - - 0.863 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
78. HELLS ENSGALG00000005451 7094 0.862 - - - - - - 0.862 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
79. MXRA5 ENSGALG00000016635 352 0.862 - - - - - - 0.862 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
80. GRB14 ENSGALG00000020703 42 0.861 - - - - - - 0.861 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
81. ATM ENSGALG00000017159 893 0.861 - - - - - - 0.861 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
82. INTS7 ENSGALG00000009843 2395 0.861 - - - - - - 0.861 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
83. HEMK1 ENSGALG00000002253 40 0.86 - - - - - - 0.860 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
84. ENSGALG00000003619 ENSGALG00000003619 58 0.86 - - - - - - 0.860 - - -
85. METTL24 ENSGALG00000041120 60 0.86 - - - - - - 0.860 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
86. ENSGALG00000026925 ENSGALG00000026925 119 0.859 - - - - - - 0.859 - - -
87. PTN ENSGALG00000040493 864 0.859 - - - - - - 0.859 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
88. BMI1 ENSGALG00000041267 6618 0.859 - - - - - - 0.859 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
89. CDC73 ENSGALG00000002469 4586 0.859 - - - - - - 0.859 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
90. JMJD7 ENSGALG00000026846 1320 0.857 - - - - - - 0.857 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
91. BIVM ENSGALG00000016861 3987 0.854 - - - - - - 0.854 - - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
92. MORC3 ENSGALG00000036556 2976 0.854 - - - - - - 0.854 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
93. CDC42SE2 ENSGALG00000027258 4725 0.853 - - - - - - 0.853 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
94. SGSM3 ENSGALG00000012033 1839 0.852 - - - - - - 0.852 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
95. SPAG9 ENSGALG00000034001 2314 0.851 - - - - - - 0.851 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
96. MCEE ENSGALG00000003913 1527 0.851 - - - - - - 0.851 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
97. RFT1 ENSGALG00000001945 2446 0.85 - - - - - - 0.850 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
98. FTSJ2 FTSJ2 2951 0.85 - - - - - - 0.850 - - -
99. MGLL ENSGALG00000032736 612 0.849 - - - - - - 0.849 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
100. FN3KRP ENSGALG00000028979 4160 0.848 - - - - - - 0.848 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]

There are 270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA