Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MSI2

Gene Name Gene ID Reads Annotation
MSI2 ENSGALG00000005567 31 musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585]











Genes with expression patterns similar to MSI2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MSI2 ENSGALG00000005567 31 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585]
2. CDC20B ENSGALG00000046188 10 1.645 - - 0.726 - - - 0.919 - - - cell division cycle 20B [Source:HGNC Symbol;Acc:HGNC:24222]
3. EPT1L ENSGALG00000015219 15 1 - - - - - - - 1.000 - - ethanolaminephosphotransferase 1-like
4. NKAIN4 ENSGALG00000005774 10 1 - - - - - - - 1.000 - - sodium/potassium transporting ATPase interacting 4 [Source:HGNC Symbol;Acc:HGNC:16191]
5. HGD ENSGALG00000014966 6 1 - - - - - - - 1.000 - - homogentisate 1,2-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4892]
6. PPP1R42 ENSGALG00000034424 2 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 42 [Source:HGNC Symbol;Acc:HGNC:33732]
7. ENSGALG00000003050 ENSGALG00000003050 4 1 - - - - - - - 1.000 - -
8. KCNG1 ENSGALG00000007980 26 1 - - - - - - - 1.000 - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
9. PTGES ENSGALG00000038013 77 1 - - - - - - - 1.000 - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
10. CHSY1 ENSGALG00000026468 4 1 - - - - - - - 1.000 - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
11. ENSGALG00000025872 ENSGALG00000025872 5 1 - - - - - - - 1.000 - -
12. TREM-A1 TREM-A1 6 1 - - - - - - - 1.000 - -
13. GPR143 ENSGALG00000016615 14 1 - - - - - - - 1.000 - - G protein-coupled receptor 143 [Source:NCBI gene;Acc:418652]
14. GPR63 ENSGALG00000015570 0 1 - - - - - - - 1.000 - - G protein-coupled receptor 63 [Source:HGNC Symbol;Acc:HGNC:13302]
15. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - - - 1.000 - -
16. ENSGALG00000015172 ENSGALG00000015172 1 1 - - - - - - - 1.000 - -
17. ATP1B4 ENSGALG00000008593 39 1 - - - - - - - 1.000 - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
18. PLD5 ENSGALG00000010737 5 1 - - - - - - - 1.000 - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
19. GLDC ENSGALG00000015053 103 1 - - - - - - - 1.000 - - glycine decarboxylase [Source:NCBI gene;Acc:374222]
20. MOG ENSGALG00000022875 9 1 - - - - - - - 1.000 - - myelin oligodendrocyte glycoprotein, transcript variant X50
21. PTF1A ENSGALG00000027144 8 1 - - - - - - - 1.000 - - pancreas associated transcription factor 1a [Source:HGNC Symbol;Acc:HGNC:23734]
22. BANK1 ENSGALG00000012292 17 1 - - - - - - - 1.000 - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
23. KANSL1 ENSGALG00000000603 5 1 - - - - - - - 1.000 - - KAT8 regulatory NSL complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24565]
24. FGFBP2 ENSGALG00000014501 12 1 - - - - - - - 1.000 - - fibroblast growth factor binding protein 2 [Source:NCBI gene;Acc:395094]
25. ZP2 ENSGALG00000002428 10 1 - - - - - - - 1.000 - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
26. PTP4A3 ENSGALG00000040969 10 1 - - - - - - - 1.000 - - protein tyrosine phosphatase type IVA, member 3 [Source:HGNC Symbol;Acc:HGNC:9636]
27. ENSGALG00000015793 ENSGALG00000015793 12 1 - - - - - - - 1.000 - -
28. NOTUM ENSGALG00000002900 55 1 - - - - - - - 1.000 - - notum, palmitoleoyl-protein carboxylesterase [Source:HGNC Symbol;Acc:HGNC:27106]
29. CCLI5 ENSGALG00000024470 1 1 - - - - - - - 1.000 - - Gallus gallus chemokine (CCLI5), mRNA. [Source:RefSeq mRNA;Acc:NM_001321492]
30. FGFBP1 ENSGALG00000014505 5 1 - - - - - - - 1.000 - - fibroblast growth factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19695]
31. LOC772158 ENSGALG00000023819 17 1 - - - - - - - 1.000 - - heat shock protein 30C-like
32. ENSGALG00000020376 ENSGALG00000020376 36 1 - - - - - - - 1.000 - -
33. ALDH9A1 ENSGALG00000003495 20 1 - - - - - - - 1.000 - - aldehyde dehydrogenase 9 family member A1
34. ZNF410 ENSGALG00000010193 28 1 - - - - - - - 1.000 - - zinc finger protein 410 [Source:NCBI gene;Acc:423340]
35. SFRP4 ENSGALG00000031997 19 1 - - - - - - - 1.000 - - secreted frizzled related protein 4 [Source:HGNC Symbol;Acc:HGNC:10778]
36. ENSGALG00000005498 ENSGALG00000005498 11 1 - - - - - - - 1.000 - -
37. STS ENSGALG00000016622 11 1 - - - - - - - 1.000 - - steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
38. DGKG ENSGALG00000005721 17 1 - - - - - - - 1.000 - - diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
39. KLHL14 ENSGALG00000036969 3 1 - - - - - - - 1.000 - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
40. CNKSR3 ENSGALG00000027159 41 0.996 - - - - - - - 0.996 - - CNKSR family member 3, transcript variant X2
41. FAM102A ENSGALG00000005074 11 0.996 - - - - - - - 0.996 - - family with sequence similarity 102 member A [Source:NCBI gene;Acc:417228]
42. RAB44 ENSGALG00000000544 6 0.961 - - - - - - - 0.961 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
43. CDK19 ENSGALG00000015051 26 0.961 - - - - - - - 0.961 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
44. PKDCCB ENSGALG00000011166 74 0.961 - - - - - - - 0.961 - - protein kinase domain containing, cytoplasmic b
45. GPM6A ENSGALG00000043480 2133 0.961 - - - - - - - 0.961 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
46. TRIM27.1 ENSGALG00000030397 19 0.961 - - - - - - - 0.961 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
47. GRIK4 ENSGALG00000006638 22 0.961 - - - - - - - 0.961 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
48. GPR114 GPR114 46 0.961 - - - - - - - 0.961 - -
49. SAMD11 ENSGALG00000034453 43 0.961 - - - - - - - 0.961 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
50. TIGD3 TIGD3 36 0.961 - - - - - - - 0.961 - -
51. SLC22A13 ENSGALG00000005934 8 0.961 - - - - - - - 0.961 - - solute carrier family 22 member 13
52. IGHMBP2 ENSGALG00000004328 118 0.961 - - - - - - - 0.961 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
53. ENSGALG00000001137 ENSGALG00000001137 0 0.961 - - - - - - - 0.961 - -
54. CKMT2 ENSGALG00000015602 46 0.958 - - - - - - - 0.958 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
55. POC5 ENSGALG00000014960 123 0.922 - - - - - - 0.922 - - - POC5 centriolar protein, transcript variant X1
56. MST MST 9 0.919 - - - - - - 0.919 - - -
57. ANKEF1 ENSGALG00000008996 12 0.919 - - - - - - 0.919 - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
58. C15orf39 ENSGALG00000027805 1 0.919 - - - - - - 0.919 - - - chromosome 15 open reading frame 39, transcript variant X2
59. SLC24A5 ENSGALG00000004885 8 0.919 - - - - - - 0.919 - - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
60. NDST3 22 0.919 - - - - - - 0.919 - - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
61. CLVS2 ENSGALG00000014853 22 0.919 - - - - - - 0.919 - - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
62. AQP12 AQP12 11 0.919 - - - - - - 0.919 - - -
63. WARS2 ENSGALG00000014772 29 0.919 - - - - - - 0.919 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
64. EDRF1 26 0.919 - - - - - - 0.919 - - - erythroid differentiation regulatory factor 1
65. SAMD10 ENSGALG00000006007 15 0.919 - - - - - - 0.919 - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
66. LOC769486 ENSGALG00000029144 20 0.919 - - - - - - 0.919 - - - scale keratin-like, transcript variant X1
67. MYOM3 ENSGALG00000004155 86 0.919 - - - - - - 0.919 - - - myomesin 3 [Source:HGNC Symbol;Acc:HGNC:26679]
68. CHRNG ENSGALG00000007906 19 0.919 - - - - - - 0.919 - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
69. DENND3 ENSGALG00000031380 11 0.919 - - - - - - 0.919 - - - DENN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29134]
70. PARD6B ENSGALG00000007994 15 0.919 - - - - - - 0.919 - - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
71. GTF3C3 ENSGALG00000007958 6 0.919 - - - - - - 0.919 - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
72. NRAP ENSGALG00000008914 24 0.919 - - - - - - 0.919 - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
73. ABI2 ENSGALG00000008714 27 0.919 - - - - - - 0.919 - - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
74. GABRP ENSGALG00000002152 17 0.919 - - - - - - 0.919 - - - gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
75. HS3ST5 ENSGALG00000026594 44 0.919 - - - - - - 0.919 - - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
76. ENSGALG00000013327 ENSGALG00000013327 16 0.919 - - - - - - 0.919 - - -
77. BICD1 ENSGALG00000012934 112 0.919 - - - - - - 0.919 - - - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
78. CA4 ENSGALG00000005360 3 0.897 - - - - - - 0.897 - - - carbonic anhydrase 4 [Source:HGNC Symbol;Acc:HGNC:1375]
79. JADE1 ENSGALG00000010214 51 0.896 - - - - - - - 0.896 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
80. ENSGALG00000014620 ENSGALG00000014620 7 0.888 - - - 0.888 - - - - - -
81. NCAPH2 228 0.881 - - - - 0.881 - - - - - non-SMC condensin II complex subunit H2, transcript variant X15
82. FBP2 ENSGALG00000012612 17 0.871 - - - - - - 0.871 - - - fructose-bisphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3607]
83. SCML4 ENSGALG00000015309 499 0.864 - - - - - - - 0.864 - - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
84. TINAG ENSGALG00000016300 5 0.861 - - - 0.861 - - - - - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
85. ERMN ENSGALG00000020575 46 0.857 - - - - - - 0.857 - - - ermin [Source:HGNC Symbol;Acc:HGNC:29208]
86. ENSGALG00000010883 ENSGALG00000010883 10 0.855 - - - - - - 0.855 - - -
87. LOC421415 ENSGALG00000010024 12 0.855 - - - - - - 0.855 - - - uncharacterized LOC421415, transcript variant X6
88. ELOVL3 ENSGALG00000025772 212 0.852 - - - - - - - 0.852 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
89. SNORA19 SNORA19 70 0.852 - - - - - - - 0.852 - -
90. DNAJB5 ENSGALG00000001918 81 0.852 - - - - - - - 0.852 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
91. IL13RA2 ENSGALG00000020316 22 0.852 - - - - - - - 0.852 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
92. SH3RF1 ENSGALG00000009692 46 0.852 - - - - - - - 0.852 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
93. GEMIN8 ENSGALG00000016574 18 0.843 - - - - - - - 0.843 - - gem nuclear organelle associated protein 8 [Source:HGNC Symbol;Acc:HGNC:26044]
94. SEC23IP ENSGALG00000009466 29 0.843 - - - - - - - - - 0.843 SEC23 interacting protein [Source:HGNC Symbol;Acc:HGNC:17018]
95. CD101 12 0.843 - - - - - - 0.843 - - - CD101 molecule, transcript variant X4
96. RFX4 ENSGALG00000012647 119 0.843 - - - - - - 0.843 - - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
97. BPIFB8 BPIFB8 49 0.838 - - - - - - 0.838 - - -
98. NCBP2 ENSGALG00000006843 938 0.837 - - - - - - - 0.837 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
99. ZNF385B ENSGALG00000009012 290 0.829 - - - - - - - 0.829 - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
100. ARL8A ENSGALG00000000606 26 0.824 - - - - - - 0.824 - - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]

There are 163 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA