Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSI1

Gene Name Gene ID Reads Annotation
MSI1 ENSGALG00000007227 2279 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]











Genes with expression patterns similar to MSI1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MSI1 ENSGALG00000007227 2279 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
2. SNW1 ENSGALG00000010501 17767 1.646 - - - - - - - - 0.759 0.887 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
3. AURKA ENSGALG00000007768 793 0.995 - - - - - - - - - 0.995 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
4. SOX6 ENSGALG00000006074 102 0.994 - - - - - - - - - 0.994 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
5. IL10R2 IL10R2 72 0.994 - - - - - - - - - 0.994
6. CXADR ENSGALG00000015701 96 0.994 - - - - - - - - - 0.994 coxsackie virus and adenovirus receptor, transcript variant X2
7. 5S_2 5S_2 58 0.994 - - - - - - - - - 0.994
8. ITSN2 ENSGALG00000016504 651 0.994 - - - - - - - - - 0.994 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
9. FAM190B FAM190B 165 0.993 - - - - - - - - - 0.993
10. CPNE2 ENSGALG00000001316 236 0.993 - - - - - - - - - 0.993 copine 2 [Source:NCBI gene;Acc:415646]
11. ZNF6 ZNF6 138 0.993 - - - - - - - - - 0.993
12. APBA3 ENSGALG00000000740 1249 0.993 - - - - - - - - - 0.993 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
13. SSH1 ENSGALG00000004928 222 0.992 - - - - - - - - - 0.992 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
14. PCLO 249 0.992 - - - - - - - - - 0.992 piccolo presynaptic cytomatrix protein
15. PM20D2 ENSGALG00000015779 1301 0.991 - - - - - - - - - 0.991 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
16. WDSUB1 ENSGALG00000012574 2038 0.991 - - - - - - - - - 0.991 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
17. CNTRL ENSGALG00000001513 1773 0.991 - - - - - - - - - 0.991 centriolin [Source:NCBI gene;Acc:417121]
18. BRD1 ENSGALG00000029379 6047 0.991 - - - - - - - - - 0.991 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
19. MTSS1 ENSGALG00000041969 1312 0.991 - - - - - - - - - 0.991 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
20. PROM1 ENSGALG00000014496 2494 0.991 - - - - - - - - - 0.991 prominin 1 [Source:NCBI gene;Acc:422825]
21. TP53BP1 ENSGALG00000042201 708 0.99 - - - - - - - - - 0.990 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
22. CASKIN1 604 0.99 - - - - - - - - - 0.990 CASK interacting protein 1, transcript variant X4
23. NARS ENSGALG00000040506 9506 0.99 - - - - - - - - - 0.990 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
24. ARHGAP21 ENSGALG00000007721 3961 0.99 - - - - - - - - - 0.990 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
25. PREX2 ENSGALG00000042354 134 0.99 - - - - - - - - - 0.990 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
26. CRYM ENSGALG00000002484 3558 0.989 - - - - - - - - - 0.989 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
27. AGGF1 ENSGALG00000004311 3011 0.989 - - - - - - - - - 0.989 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
28. MYH1D ENSGALG00000027323 365 0.988 - - - - - - - - - 0.988 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
29. INTS10 ENSGALG00000010130 6320 0.988 - - - - - - - - - 0.988 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
30. FAM129A ENSGALG00000004812 269 0.988 - - - - - - - - - 0.988 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
31. FSTL4 ENSGALG00000031487 529 0.988 - - - - - - - - - 0.988 follistatin like 4 [Source:NCBI gene;Acc:395163]
32. FASTKD3 ENSGALG00000033521 1186 0.988 - - - - - - - - - 0.988 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
33. ITGA9 ENSGALG00000029378 415 0.988 - - - - - - - - - 0.988 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
34. FRMD3 ENSGALG00000012577 999 0.988 - - - - - - - - - 0.988 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
35. DIAPH3 ENSGALG00000016937 1069 0.988 - - - - - - - - - 0.988 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
36. WHSC1 1712 0.987 - - - - - - - - - 0.987 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
37. C10orf118 C10orf118 762 0.987 - - - - - - - - - 0.987
38. C14orf80 C14orf80 1921 0.987 - - - - - - - - - 0.987
39. HAUS8 ENSGALG00000003727 351 0.986 - - - - - - - - - 0.986 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
40. CDH1-A CDH1-A 343 0.986 - - - - - - - - - 0.986
41. SLC39A13 ENSGALG00000008122 2003 0.985 - - - - - - - - - 0.985 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
42. RTN4R ENSGALG00000007732 1515 0.985 - - - - - - - - - 0.985 reticulon 4 receptor
43. MGA 1911 0.983 - - - - - - - - - 0.983 MGA, MAX dimerization protein, transcript variant X15
44. PDPN ENSGALG00000030096 647 0.983 - - - - - - - - - 0.983 podoplanin, transcript variant X4
45. PLA2G15 ENSGALG00000041787 762 0.983 - - - - - - - - - 0.983 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
46. SLC2A3 SLC2A3 527 0.983 - - - - - - - - - 0.983
47. PTX3 ENSGALG00000028284 2984 0.983 - - - - - - - - - 0.983 pentraxin 3 [Source:NCBI gene;Acc:548626]
48. LRRN4 ENSGALG00000008815 481 0.982 - - - - - - - - - 0.982 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
49. ASAP2 ENSGALG00000016419 1393 0.982 - - - - - - - - - 0.982 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
50. CPNE1 ENSGALG00000040856 610 0.982 - - - - - - - - - 0.982 copine 1 [Source:NCBI gene;Acc:419134]
51. TMEM128 ENSGALG00000014992 6567 0.982 - - - - - - - - - 0.982 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
52. GRK4 ENSGALG00000015645 1065 0.981 - - - - - - - - - 0.981 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
53. SGSH ENSGALG00000007027 1115 0.981 - - - - - - - - - 0.981 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
54. CCDC51 ENSGALG00000006465 1845 0.981 - - - - - - - - - 0.981 coiled-coil domain containing 51, transcript variant X1
55. TBC1D19 ENSGALG00000029673 1868 0.981 - - - - - - - - - 0.981 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
56. MPRIP ENSGALG00000004798 6700 0.981 - - - - - - - - - 0.981 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
57. HOTAIRM1 HOTAIRM1 4335 0.981 - - - - - - - - - 0.981
58. TANGO2 ENSGALG00000002056 1971 0.981 - - - - - - - - - 0.981 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
59. CCT8 ENSGALG00000015821 12161 0.981 - - - - - - - - - 0.981 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
60. FBXO21 ENSGALG00000008201 2608 0.98 - - - - - - - - - 0.980 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
61. ENSGALG00000005389 ENSGALG00000005389 553 0.98 - - - - - - - - - 0.980
62. CCDC88A ENSGALG00000043587 2208 0.979 - - - - - - - - - 0.979 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
63. ACADL ENSGALG00000002891 8058 0.979 - - - - - - - - - 0.979 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
64. FREM3 ENSGALG00000020561 1824 0.979 - - - - - - - - - 0.979 FRAS1 related extracellular matrix 3
65. ZNF106 ENSGALG00000009081 1520 0.979 - - - - - - - - - 0.979 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
66. MB21D1 2460 0.979 - - - - - - - - - 0.979 Mab-21 domain containing 1
67. HYAL3 ENSGALG00000029000 712 0.979 - - - - - - - - - 0.979 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
68. ASB3 ENSGALG00000008176 5422 0.978 - - - - - - - - - 0.978 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
69. ERI2 1087 0.978 - - - - - - - - - 0.978 ERI1 exoribonuclease family member 2, transcript variant X1
70. ZFR ENSGALG00000003235 8466 0.978 - - - - - - - - - 0.978 zinc finger RNA binding protein, transcript variant X3
71. RWDD2B ENSGALG00000015807 3601 0.977 - - - - - - - - - 0.977 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
72. SMC6 ENSGALG00000016467 3321 0.977 - - - - - - - - - 0.977 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
73. MRPL50 ENSGALG00000015543 11649 0.977 - - - - - - - - - 0.977 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
74. SSR2 ENSGALG00000000764 32190 0.976 - - - - - - - - - 0.976 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
75. SPDL1 ENSGALG00000001942 4403 0.976 - - - - - - - - - 0.976 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
76. CPT2 ENSGALG00000010681 3211 0.975 - - - - - - - - - 0.975 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
77. MPP5 ENSGALG00000009581 724 0.975 - - - - - - - - - 0.975 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
78. RNF219 ENSGALG00000016911 4458 0.974 - - - - - - - - - 0.974 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
79. ESRRG ENSGALG00000009645 2783 0.974 - - - - - - - - - 0.974 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
80. C26H6ORF89 C26H6ORF89 1826 0.973 - - - - - - - - - 0.973
81. UQCR11 ENSGALG00000001096 25245 0.973 - - - - - - - - - 0.973 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
82. LAMP2 ENSGALG00000008572 198 0.972 - - - - - - - - - 0.972 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
83. STX2 ENSGALG00000002536 10438 0.972 - - - - - - - - - 0.972 syntaxin 2 [Source:NCBI gene;Acc:378895]
84. SLC35B1 ENSGALG00000035057 10683 0.972 - - - - - - - - - 0.972 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
85. TMEM243 ENSGALG00000006633 1592 0.971 - - - - - - - - - 0.971 transmembrane protein 243 [Source:HGNC Symbol;Acc:HGNC:21707]
86. DCAF5 ENSGALG00000009463 1297 0.971 - - - - - - - - - 0.971 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
87. RHOT1 ENSGALG00000003397 5149 0.97 - - - - - - - - - 0.970 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
88. ARPC1B ENSGALG00000032588 2407 0.97 - - - - - - - - - 0.970 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
89. C1orf198 ENSGALG00000026600 5651 0.97 - - - - - - - - - 0.970 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
90. SUV39H2 ENSGALG00000013920 4360 0.97 - - - - - - - - - 0.970 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
91. FBLIM1 ENSGALG00000003636 1498 0.969 - - - - - - - - - 0.969 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
92. FBXO38 ENSGALG00000038627 2658 0.969 - - - - - - - - - 0.969 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
93. HABP4 ENSGALG00000012628 2894 0.969 - - - - - - - - - 0.969 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
94. IDS ENSGALG00000009154 1177 0.969 - - - - - - - - - 0.969 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
95. KLHL7 ENSGALG00000010938 528 0.969 - - - - - - - - - 0.969 kelch like family member 7 [Source:NCBI gene;Acc:420612]
96. GXYLT1 ENSGALG00000009532 5682 0.968 - - - - - - - - - 0.968 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
97. TMEM130 ENSGALG00000003569 949 0.968 - - - - - - - - - 0.968 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
98. RAD50 ENSGALG00000006794 4308 0.968 - - - - - - - - - 0.968 RAD50 double strand break repair protein, transcript variant X4
99. MYOCD ENSGALG00000001021 351 0.967 - - - - - - - - - 0.967 myocardin [Source:NCBI gene;Acc:427790]
100. PPM1E ENSGALG00000005061 2606 0.967 - - - - - - - - - 0.967 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]

There are 446 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA