Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSH5-SAPCD1

Gene Name Gene ID Reads Annotation
MSH5-SAPCD1 ENSG00000254405, ENSG00000255152, ENSG00000255419, ENSG00000264619, ENSG00000266027, ENSG00000266442 15 MSH5-SAPCD1 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:41994]



Genes with expression patterns similar to MSH5-SAPCD1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. MSH5-SAPCD1 ENSG00000254405, ENSG00000255152, ENSG00000255419, ENSG00000264619, ENSG00000266027, ENSG00000266442 15 2 1.000 1.000 MSH5-SAPCD1 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:41994]
2. C1QTNF9B-AS1 10 0.93 0.930 - C1QTNF9B antisense RNA 1, transcript variant 2
3. MRVI1-AS1 ENSG00000177112 17 0.926 0.926 - MRVI1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:43434]
4. KY ENSG00000174611 16 0.852 0.852 - kyphoscoliosis peptidase [Source:HGNC Symbol;Acc:HGNC:26576]
5. MS4A14 ENSG00000166928 13 0.852 0.852 - membrane spanning 4-domains A14 [Source:HGNC Symbol;Acc:HGNC:30706]
6. OR13D1 ENSG00000179055 3 0.852 0.852 - olfactory receptor family 13 subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:14695]
7. LOC100507156 7 0.852 0.852 - uncharacterized LOC100507156
8. LINC00539 ENSG00000224429 4 0.852 0.852 - long intergenic non-protein coding RNA 539 [Source:HGNC Symbol;Acc:HGNC:43672]
9. SPINK1 ENSG00000164266 34921 0.852 0.852 - serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
10. LILRA3 ENSG00000273884, ENSG00000275841, ENSG00000276175, ENSG00000278046 3 0.852 0.852 - leukocyte immunoglobulin like receptor A3 [Source:HGNC Symbol;Acc:HGNC:6604]
11. LINC01126 ENSG00000279873 11 0.852 0.852 - long intergenic non-protein coding RNA 1126 [Source:HGNC Symbol;Acc:HGNC:49275]
12. HIST1H4I ENSG00000276180 4 0.852 0.852 - histone cluster 1 H4 family member i [Source:HGNC Symbol;Acc:HGNC:4793]
13. DCHS2 ENSG00000197410, ENSG00000284227 10 0.852 0.852 - dachsous cadherin-related 2 [Source:HGNC Symbol;Acc:HGNC:23111]
14. MS4A6A ENSG00000110077 28 0.852 0.852 - membrane spanning 4-domains A6A [Source:HGNC Symbol;Acc:HGNC:13375]
15. TOP1P2 3 0.852 0.852 - topoisomerase (DNA) I pseudogene 2
16. CSTA ENSG00000121552 14 0.852 0.852 - cystatin A [Source:HGNC Symbol;Acc:HGNC:2481]
17. IVL ENSG00000163207 3 0.852 0.852 - involucrin [Source:HGNC Symbol;Acc:HGNC:6187]
18. PLCXD1 ENSG00000182378 4 0.852 0.852 - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23148]
19. EFCAB10 ENSG00000185055 5 0.852 0.852 - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
20. KRT12 ENSG00000187242, ENSG00000263243 3 0.852 0.852 - keratin 12 [Source:HGNC Symbol;Acc:HGNC:6414]
21. SLC2A14 ENSG00000173262 20 0.852 0.852 - solute carrier family 2 member 14 [Source:HGNC Symbol;Acc:HGNC:18301]
22. KLK2 ENSG00000167751 3 0.852 0.852 - kallikrein related peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6363]
23. LOC101927694 5 0.852 0.852 - uncharacterized LOC101927694
24. KCTD4 ENSG00000180332 3 0.852 0.852 - potassium channel tetramerization domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23227]
25. IL2RA ENSG00000134460 3 0.852 0.852 - interleukin 2 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6008]
26. GUCY1B2 ENSG00000123201 3 0.852 0.852 - guanylate cyclase 1 soluble subunit beta 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4686]
27. EPN2-AS1 ENSG00000235397 3 0.852 0.852 - EPN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40849]
28. UCA1 ENSG00000214049 43 0.838 0.838 - urothelial cancer associated 1 [Source:HGNC Symbol;Acc:HGNC:37126]
29. TAGAP ENSG00000164691 28 0.827 0.827 - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
30. SLC26A9 ENSG00000174502 8 0.821 0.821 - solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
31. LTF ENSG00000012223 19 0.808 0.808 - lactotransferrin [Source:HGNC Symbol;Acc:HGNC:6720]
32. KLF1 ENSG00000105610 35 0.802 0.802 - Kruppel like factor 1 [Source:HGNC Symbol;Acc:HGNC:6345]
33. SUGT1P1 ENSG00000226823 47 0.789 0.789 - SUGT1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:19384]
34. ATP11A-AS1 ENSG00000232684 10 0.789 0.789 - ATP11A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40645]
35. MIR3663HG ENSG00000234474 4 0.781 0.781 - MIR3663 host gene [Source:HGNC Symbol;Acc:HGNC:50676]
36. TYMS ENSG00000176890 17 0.78 0.780 - thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
37. SAA2 ENSG00000134339 8 0.767 0.767 - serum amyloid A2 [Source:HGNC Symbol;Acc:HGNC:10514]
38. PRR34-AS1 ENSG00000241990 10 0.766 0.766 - PRR34 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50499]
39. LINC01179 ENSG00000249500 9 0.76 0.760 - long intergenic non-protein coding RNA 1179 [Source:HGNC Symbol;Acc:HGNC:49556]
40. C1QTNF9B ENSG00000205863 5 0.759 0.759 - C1q and TNF related 9B [Source:HGNC Symbol;Acc:HGNC:34072]
41. LOC283585 9 0.749 0.749 - uncharacterized LOC283585
42. CACNG1 ENSG00000108878 9 0.749 0.749 - calcium voltage-gated channel auxiliary subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:1405]
43. FYB 193 0.749 0.749 - FYN binding protein, transcript variant X8
44. NDUFA4L2 ENSG00000185633 8 0.748 0.748 - NDUFA4, mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]
45. SNORA79 ENSG00000221303 94 0.746 0.746 - small nucleolar RNA, H/ACA box 79 [Source:HGNC Symbol;Acc:HGNC:32665]
46. HK3 ENSG00000160883 11 0.745 0.745 - hexokinase 3 [Source:HGNC Symbol;Acc:HGNC:4925]
47. MMP9 ENSG00000100985 15 0.742 0.742 - matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]
48. PPEF2 ENSG00000156194 7 0.741 0.741 - protein phosphatase with EF-hand domain 2 [Source:HGNC Symbol;Acc:HGNC:9244]
49. SCX ENSG00000260428 19 0.741 0.741 - scleraxis bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:32322]
50. LY75 ENSG00000054219 16 0.734 0.734 - lymphocyte antigen 75 [Source:HGNC Symbol;Acc:HGNC:6729]
51. PKD2L1 ENSG00000107593 8 0.732 0.732 - polycystin 2 like 1, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9011]
52. CRISP1 ENSG00000124812 9 0.722 0.722 - cysteine rich secretory protein 1 [Source:HGNC Symbol;Acc:HGNC:304]
53. LINC01247 ENSG00000227007 4 0.722 0.722 - long intergenic non-protein coding RNA 1247 [Source:HGNC Symbol;Acc:HGNC:49841]
54. XKR4 ENSG00000206579 42 0.721 0.721 - XK related 4 [Source:HGNC Symbol;Acc:HGNC:29394]
55. OR2B2 ENSG00000168131 9 0.72 0.720 - olfactory receptor family 2 subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:13966]
56. LOC101927310 7 0.72 0.720 - uncharacterized LOC101927310
57. LYZ ENSG00000090382 570 0.718 0.718 - lysozyme [Source:HGNC Symbol;Acc:HGNC:6740]
58. FCRL6 ENSG00000181036 25 0.702 0.702 - Fc receptor like 6 [Source:HGNC Symbol;Acc:HGNC:31910]
59. RTP4 ENSG00000136514 7 0.7 0.700 - receptor transporter protein 4 [Source:HGNC Symbol;Acc:HGNC:23992]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA